BMRB Entry 26503
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR26503
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Title: A 13C Labeling Strategy Reveals a Range of Aromatic Side Chain Motion in Calmodulin PubMed: 23767407
Deposition date: 2015-01-07 Original release date: 2015-01-23
Authors: Kasinath, Vignesh; Valentine, Kathleen; Wand, Joshua
Citation: Kasinath, Vignesh; Valentine, Kathleen; Wand, Joshua. "A 13C Labeling Strategy Reveals a Range of Aromatic Side Chain Motion in Calmodulin" J. Am. Chem. Soc. 135, 9560-9563 (2013).
Assembly members:
Calmodulin, polymer, 148 residues, Formula weight is not available
CALCIUM ION, non-polymer, 40.078 Da.
Natural source: Common Name: Chicken Taxonomy ID: 9031 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Gallus gallus
Experimental source: Production method: recombinant technology Host organism: Escherichia coli
Entity Sequences (FASTA):
Calmodulin: ADQLTEEQIAEFKEAFSLFD
KDGDGTITTKELGTVMRSLG
QNPTEAELQDMINEVDADGN
GTIDFPEFLTMMARKMKDTD
SEEEIREAFRVFDKDGNGYI
SAAELRHVMTNLGEKLTDEE
VDEMIREADIDGDGQVNYEE
FVQMMTAK
- assigned_chemical_shifts
- heteronucl_T1_relaxation
- heteronucl_T1rho_relaxation
- order_parameters
Data type | Count |
T1 relaxation values | 56 |
T1rho relaxation values | 56 |
order parameters | 30 |
Additional metadata:
Assembly:
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | Calmodulin | 1 |
2 | Calcium ion 1 | 2 |
3 | Calcium ion 2 | 2 |
4 | Calcium ion 3 | 2 |
5 | Calcium ion 4 | 2 |
Entities:
Entity 1, Calmodulin 148 residues - Formula weight is not available
1 | ALA | ASP | GLN | LEU | THR | GLU | GLU | GLN | ILE | ALA | ||||
2 | GLU | PHE | LYS | GLU | ALA | PHE | SER | LEU | PHE | ASP | ||||
3 | LYS | ASP | GLY | ASP | GLY | THR | ILE | THR | THR | LYS | ||||
4 | GLU | LEU | GLY | THR | VAL | MET | ARG | SER | LEU | GLY | ||||
5 | GLN | ASN | PRO | THR | GLU | ALA | GLU | LEU | GLN | ASP | ||||
6 | MET | ILE | ASN | GLU | VAL | ASP | ALA | ASP | GLY | ASN | ||||
7 | GLY | THR | ILE | ASP | PHE | PRO | GLU | PHE | LEU | THR | ||||
8 | MET | MET | ALA | ARG | LYS | MET | LYS | ASP | THR | ASP | ||||
9 | SER | GLU | GLU | GLU | ILE | ARG | GLU | ALA | PHE | ARG | ||||
10 | VAL | PHE | ASP | LYS | ASP | GLY | ASN | GLY | TYR | ILE | ||||
11 | SER | ALA | ALA | GLU | LEU | ARG | HIS | VAL | MET | THR | ||||
12 | ASN | LEU | GLY | GLU | LYS | LEU | THR | ASP | GLU | GLU | ||||
13 | VAL | ASP | GLU | MET | ILE | ARG | GLU | ALA | ASP | ILE | ||||
14 | ASP | GLY | ASP | GLY | GLN | VAL | ASN | TYR | GLU | GLU | ||||
15 | PHE | VAL | GLN | MET | MET | THR | ALA | LYS |
Entity 2, Calcium ion 1 - Ca - 40.078 Da.
1 | CA |
Samples:
sample_1: Calmodulin, [U-100% 15N; U-100% 2H; U-67% 13C-F CD2, CDZ, Y CD2; NA-F HD2, Y HD2], 1 mM; MES 10 mM; CaCl2 5 mM; azide 0.02%; KCl 50 mM; D2O 100%
sample_2: Calmodulin, [U-100% 13C], 1 mM; MES 10 mM; CaCl2 5 mM; azide 0.02%; KCl 50 mM; D2O 100%
sample_conditions_1: temperature: 308 K; pH: 6.5; pressure: 1 atm
Experiments:
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
13C HSQC 1 | sample_1 | isotropic | sample_conditions_1 |
13C HSQC 2 | sample_2 | isotropic | sample_conditions_1 |
Software:
na, na - na
NMR spectrometers:
- Bruker Avance III 500 MHz
- Bruker Avance III 600 MHz
- Bruker Avance III 750 MHz
Related Database Links:
BMRB | 15184 15185 15186 15187 15188 15191 15470 15624 15650 15852 1634 16418 16465 1648 16764 17264 17360 17771 17807 18027 18028 18556 19036 19238 19586 19604 25253 25257 26626 26627 4056 4270 4284 4310 |
PDB | |
DBJ | BAA08302 BAA11896 BAA19786 BAA19787 BAA19788 |
EMBL | CAA10601 CAA32050 CAA32062 CAA32119 CAA32120 |
GB | AAA35635 AAA35641 AAA37365 AAA40862 AAA40863 |
PIR | JC1305 MCON |
PRF | 0409298A 0608335A |
REF | NP_001008160 NP_001009759 NP_001027633 NP_001039714 NP_001040234 |
SP | O02367 O16305 O96081 P02594 P05932 |
TPG | DAA13808 DAA18029 DAA19590 DAA24777 DAA24988 |