BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 7142

Title: rabbit prion protein (91-228)   PubMed: 17415669

Deposition date: 2006-06-04 Original release date: 2007-06-05

Authors: Li, Jun; Mei, Fanghua; Xiao, Gengfu; Guo, Chenyun; Lin, Donghai

Citation: Li, Jun; Mei, Fanghua; Xiao, Gengfu; Guo, Chenyun; Lin, Donghai. "NMR structure of rabbit prion protein (91-228)"  J. Biomol. NMR 38, 181-181 (2007).

Assembly members:
prion protein, polymer, 138 residues, Formula weight is not available

Natural source:   Common Name: Rabbit   Taxonomy ID: 9986   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Oryctolagus cuniculus

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
prion protein: QGGTHNQWGKPSKPKTSMKH VAGAAAAGAVVGGLGGYMLG SAMSRPLIHFGNDYEDRYYR ENMYRYPNQVYYRPVDQYSN QNSFVHDCVNITVKQHTVTT TTKGENFTETDIKIMERVVE QMCITQYQQESQAAYQRA

Data sets:
Data typeCount
13C chemical shifts532
15N chemical shifts156
1H chemical shifts928

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1prion protein1

Entities:

Entity 1, prion protein 138 residues - Formula weight is not available

1   GLNGLYGLYTHRHISASNGLNTRPGLYLYS
2   PROSERLYSPROLYSTHRSERMETLYSHIS
3   VALALAGLYALAALAALAALAGLYALAVAL
4   VALGLYGLYLEUGLYGLYTYRMETLEUGLY
5   SERALAMETSERARGPROLEUILEHISPHE
6   GLYASNASPTYRGLUASPARGTYRTYRARG
7   GLUASNMETTYRARGTYRPROASNGLNVAL
8   TYRTYRARGPROVALASPGLNTYRSERASN
9   GLNASNSERPHEVALHISASPCYSVALASN
10   ILETHRVALLYSGLNHISTHRVALTHRTHR
11   THRTHRLYSGLYGLUASNPHETHRGLUTHR
12   ASPILELYSILEMETGLUARGVALVALGLU
13   GLNMETCYSILETHRGLNTYRGLNGLNGLU
14   SERGLNALAALATYRGLNARGALA

Samples:

sample_1: prion protein, [U-13C; U-15N], 1 mM

conditions_1: pH: 4.5 .; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
HNCAsample_1not availableconditions_1
HNCACBsample_1not availableconditions_1
HN(CO)CACBsample_1not availableconditions_1
HN(CO)CAsample_1not availableconditions_1

Software:

No software information available

NMR spectrometers:

  • Varian Unity Inova 600 MHz

Related Database Links:

BMRB 15394 15399 16328 16616 6953
PDB
EMBL CBK44083
GB AAC48697 AAD01554 ABL75505 AEM44421 AEM44422
REF NP_001075490 XP_008254357 XP_008254358
SP Q95211

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts