BMRB Entry 16225
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR16225
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Title: Solution Structure of cis-5R,6S-thymine glycol opposite complementary adenine in duplex DNA PubMed: 19892827
Deposition date: 2009-03-24 Original release date: 2010-05-27
Authors: Brown, Kyle
Citation: Brown, Kyle; Roginskaya, Marina; Zou, Yue; Altamirano, Alvin; Basu, Ashis; Stone, Michael. "Binding of the human nucleotide excision repair proteins XPA and XPC/HR23B to the 5R-thymine glycol lesion and structure of the cis-(5R,6S) thymine glycol epimer in the 5'-GTgG-3' sequence: destabilization of two base pairs at the lesion site" Nucleic Acids Res. 38, 428-440 (2010).
Assembly members:
DNA_(5'-D(*DGP*DTP*DGP*DCP*DGP*(TG)P*DGP*DTP*DTP*DTP*DGP*DT)-3'), polymer, 12 residues, 3392.232 Da.
DNA_(5'-D(*DAP*DCP*DAP*DAP*DAP*DCP*DAP*DCP*DGP*DCP*DAP*DC)-3'), polymer, 12 residues, 3609.425 Da.
Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
DNA_(5'-D(*DGP*DTP*DGP*DCP*DGP*(TG)P*DGP*DTP*DTP*DTP*DGP*DT)-3'): GTGCGXGTTTGT
DNA_(5'-D(*DAP*DCP*DAP*DAP*DAP*DCP*DAP*DCP*DGP*DCP*DAP*DC)-3'): ACAAACACGCAC
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 231 |
| 31P chemical shifts | 20 |