BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 17956

Title: Solution structure of MCoTI-V   PubMed: 22822203

Deposition date: 2011-09-23 Original release date: 2012-08-06

Authors: Daly, Norelle; Craik, David

Citation: Mylne, Joshua; Chan, Lai Yue; Chanson, Aurelie; Daly, Norelle; Schaefer, Hanno; Bailey, Timothy; Nguyencong, Philip; Cascales, Laura; Craik, David. "Cyclic Peptides Arising by Evolutionary Parallelism via Asparaginyl-Endopeptidase-Mediated Biosynthesis."  Plant Cell 24, 2765-2778 (2012).

Assembly members:
entity, polymer, 30 residues, 3320.915 Da.

Natural source:   Common Name: spiny bitter cucumber   Taxonomy ID: 3674   Superkingdom: Eukaryota   Kingdom: Viridiplantae   Genus/species: Momordica cochinchinensis

Experimental source:   Production method: purified from the natural source   Host organism: Momordica cochinchinensis

Entity Sequences (FASTA):
entity: XRACPRILKKCRRDSDCPGE CICKGNGYCG

Data sets:
Data typeCount
1H chemical shifts179

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1MCoTI-V1

Entities:

Entity 1, MCoTI-V 30 residues - 3320.915 Da.

1   PCAARGALACYSPROARGILELEULYSLYS
2   CYSARGARGASPSERASPCYSPROGLYGLU
3   CYSILECYSLYSGLYASNGLYTYRCYSGLY

Samples:

sample_1: MCoTI-V 1 mM; H2O 90%; D2O 10%

sample_conditions_1: ionic strength: 0 M; pH: 5; pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1
2D 1H-1H COSYsample_1isotropicsample_conditions_1
2D 1H-1H NOESYsample_1isotropicsample_conditions_1

Software:

TOPSPIN, Bruker Biospin - collection

SPARKY, Goddard - chemical shift assignment

CYANA, Guntert, Mumenthaler and Wuthrich - structure solution

CNSSOLVE, Brunger, Adams, Clore, Gros, Nilges and Read - structure solution

NMR spectrometers:

  • Bruker ARX 600 MHz

Related Database Links:

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