BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 18104

Title: MARCKS MH2 Domain free and mAb 3C3 bounded   PubMed: 24590112

Deposition date: 2011-11-28 Original release date: 2014-03-14

Authors: Tinoco, Luzineide; Fraga, Jully; AnoBom, Cristiane; Zolessi, Flavio; Obal, Gonzalo; Toledo, Andrea; Pritsch, Otto; Arruti, Cristina

Citation: Tinoco, Luzineide; Fraga, Jully; AnoBom, Cristiane; Zolessi, Flavio; Obal, Gonzalo; Toledo, Andrea; Pritsch, Otto; Arruti, Cristina. "Structural characterization of a neuroblast-specific phosphorylated region of MARCKS"  Biochim. Biophys. Acta 1844, 837-849 (2014).

Assembly members:
MARCKS_peptides, polymer, 20 residues, 1941 Da.

Natural source:   Common Name: chicken   Taxonomy ID: 9031   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Gallus gallus

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
MARCKS_peptides: EKPGEAVAASPSKANGQENG

Data sets:
Data typeCount
1H chemical shifts93

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1S25up1

Entities:

Entity 1, S25up 20 residues - 1941 Da.

Residue 1-20 represents part (residues 16-35) of the MH2 Gallus gallus MARCKS domain

1   GLULYSPROGLYGLUALAVALALAALASER
2   PROSERLYSALAASNGLYGLNGLUASNGLY

Samples:

sample_S25up: MARCKS peptides 1.2 mM; sodium phosphate 10 mM

sample_conditions_1: ionic strength: 13.7 mM; pH: 7.2; pressure: 1 atm; temperature: 298 K

sample_conditions_2: ionic strength: 13.7 mM; pH: 7.2; pressure: 1 atm; temperature: 278 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H TOCSYsample_S25upisotropicsample_conditions_1
2D 1H-1H NOESYsample_S25upisotropicsample_conditions_1

Software:

NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing

NMRView, Johnson, One Moon Scientific - chemical shift assignment

NMR spectrometers:

  • Bruker DRX 600 MHz
  • Varian INOVA 600 MHz

Related Database Links:

EMBL CAJ81538
GB AAA48946 AAH75394 EMP38065 EOB08830 KQL91641
REF NP_001006693 NP_990811 XP_005287641 XP_005518342 XP_005518343
SP P16527