BMRB Entry 19204
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR19204
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Title: Backbone 1H, 13C, and 15N Chemical Shift Assignments for BAF155 SWIRM PubMed: 23996527
Deposition date: 2013-04-30 Original release date: 2013-05-14
Authors: Moon, Sunjin; Lee, Weontae
Citation: Moon, Sunjin; Shin, Joon; Lee, Dongju; Seong, Rho; Lee, Weontae. "(1)H, (15)N, and (13)C resonance assignments and secondary structure of the SWIRM domain of human BAF155, a chromatin remodeling complex component." Mol. Cells 36, 333-339 (2013).
Assembly members:
BAF155_SWIRM_domain, polymer, 98 residues, Formula weight is not available
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: purified from the natural source Host organism: Escherichia coli
Entity Sequences (FASTA):
BAF155_SWIRM_domain: IIIPSYASWFDYNCIHVIER
RALPEFFNGKNKSKTPEIYL
AYRNFMIDTYRLNPQEYLTS
TACRRNLTGDVCAVMRVHAF
LEQWGLVNYQVDPESRPM
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 280 |
| 15N chemical shifts | 86 |
| 1H chemical shifts | 608 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | BAF155 SWIRM domain | 1 |
Entities:
Entity 1, BAF155 SWIRM domain 98 residues - Formula weight is not available
| 1 | ILE | ILE | ILE | PRO | SER | TYR | ALA | SER | TRP | PHE | ||||
| 2 | ASP | TYR | ASN | CYS | ILE | HIS | VAL | ILE | GLU | ARG | ||||
| 3 | ARG | ALA | LEU | PRO | GLU | PHE | PHE | ASN | GLY | LYS | ||||
| 4 | ASN | LYS | SER | LYS | THR | PRO | GLU | ILE | TYR | LEU | ||||
| 5 | ALA | TYR | ARG | ASN | PHE | MET | ILE | ASP | THR | TYR | ||||
| 6 | ARG | LEU | ASN | PRO | GLN | GLU | TYR | LEU | THR | SER | ||||
| 7 | THR | ALA | CYS | ARG | ARG | ASN | LEU | THR | GLY | ASP | ||||
| 8 | VAL | CYS | ALA | VAL | MET | ARG | VAL | HIS | ALA | PHE | ||||
| 9 | LEU | GLU | GLN | TRP | GLY | LEU | VAL | ASN | TYR | GLN | ||||
| 10 | VAL | ASP | PRO | GLU | SER | ARG | PRO | MET |
Samples:
sample_1: BAF155 SWIRM domain, [U-100% 13C; U-100% 15N], 0.5 mM
sample_conditions_1: ionic strength: 0.1 M; pH: 6.8; pressure: 1 atm; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D 1H-15N HSQC | sample_1 | isotropic | sample_conditions_1 |
| 3D HNCACB | sample_1 | isotropic | sample_conditions_1 |
| 3D HNCA | sample_1 | isotropic | sample_conditions_1 |
| 3D CBCA(CO)NH | sample_1 | isotropic | sample_conditions_1 |
Software:
SPARKY, Goddard - chemical shift assignment
NMR spectrometers:
- Bruker DRX 500 MHz
Related Database Links:
| DBJ | BAE25395 BAE25713 BAE25978 BAG63721 BAG63813 |
| GB | AAB42085 AAC50693 AAH21862 AAH32564 AAH39843 |
| REF | NP_001100331 NP_003065 NP_033237 XP_001154676 XP_001366921 |
| SP | P97496 Q92922 |
| TPG | DAA17059 |
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts