BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 19246

Title: 1H, 13C and 15N resonance assignments of human GAP-43   PubMed: 26748655

Deposition date: 2013-05-16 Original release date: 2016-10-04

Authors: Coudevylle, Nicolas; Konrat, Robert; Kozminski, Wiktor; Zerko, Szymon

Citation: Flamm, Andrea; Zerko, Szymon; Zawadzka-Kazimierczuk, Anna; Kozminski, Wiktor; Konrat, Robert; Coudevylle, Nicolas. "1H, 15N, 13C resonance assignment of human GAP-43"  Biomol. NMR Assign. 10, 171-174 (2016).

Assembly members:
GAP-43, polymer, 249 residues, Formula weight is not available

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
GAP-43: MLGGMRRTKQVEKNDDDQKI EQDGIKPEDKAHKAATKIQA SFRGHITRKKLKGEKKDDVQ AAEAEANKKDEAPVADGVEK KGEGTTTAEAAPATGSKPDE PGKAGETPSEEKKGEGDAAT EQAAPQAPASSEEKAGSAET ESATKASTDNSPSSKAEDAP AKEEPKQADVPAAVTAAAAT TPAAEDAAAKATAQPPTETG ESSQAEENIEAVDETKPKES ARQDEGKEEEPEADQEHAAA LEHHHHHHH

Data sets:
Data typeCount
13C chemical shifts703
15N chemical shifts219
1H chemical shifts1021

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1GAP-431

Entities:

Entity 1, GAP-43 249 residues - Formula weight is not available

1   METLEUGLYGLYMETARGARGTHRLYSGLN
2   VALGLULYSASNASPASPASPGLNLYSILE
3   GLUGLNASPGLYILELYSPROGLUASPLYS
4   ALAHISLYSALAALATHRLYSILEGLNALA
5   SERPHEARGGLYHISILETHRARGLYSLYS
6   LEULYSGLYGLULYSLYSASPASPVALGLN
7   ALAALAGLUALAGLUALAASNLYSLYSASP
8   GLUALAPROVALALAASPGLYVALGLULYS
9   LYSGLYGLUGLYTHRTHRTHRALAGLUALA
10   ALAPROALATHRGLYSERLYSPROASPGLU
11   PROGLYLYSALAGLYGLUTHRPROSERGLU
12   GLULYSLYSGLYGLUGLYASPALAALATHR
13   GLUGLNALAALAPROGLNALAPROALASER
14   SERGLUGLULYSALAGLYSERALAGLUTHR
15   GLUSERALATHRLYSALASERTHRASPASN
16   SERPROSERSERLYSALAGLUASPALAPRO
17   ALALYSGLUGLUPROLYSGLNALAASPVAL
18   PROALAALAVALTHRALAALAALAALATHR
19   THRPROALAALAGLUASPALAALAALALYS
20   ALATHRALAGLNPROPROTHRGLUTHRGLY
21   GLUSERSERGLNALAGLUGLUASNILEGLU
22   ALAVALASPGLUTHRLYSPROLYSGLUSER
23   ALAARGGLNASPGLUGLYLYSGLUGLUGLU
24   PROGLUALAASPGLNGLUHISALAALAALA
25   LEUGLUHISHISHISHISHISHISHIS

Samples:

sample_1: GAP-43, [U-95% 13C; U-95% 15N], 9.5 mM; Bis-Tris 20 mM; NaCl 50 mM

sample_conditions_1: ionic strength: 120 mM; pH: 6; pressure: 1 atm; temperature: 273 K

Experiments:

NameSampleSample stateSample conditions
5D HN(CA)CONHsample_1isotropicsample_conditions_1
5D (HACA)CON(CA)CONHsample_1isotropicsample_conditions_1
5D (H)NCO(NCA)CONHsample_1isotropicsample_conditions_1
5D HNCOCACBsample_1isotropicsample_conditions_1
5D HabCabCONHsample_1isotropicsample_conditions_1
5D H(CC-tocsy)CONHsample_1isotropicsample_conditions_1

Software:

MFT, Wiktor Kozminski - processing

SPARKY, Goddard - chemical shift assignment

NMR spectrometers:

  • Varian DirectDrive 700 MHz

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts