BMRB Entry 25169
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR25169
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Title: Backbone 1H, 13C, and 15N Chemical Shift Assignments for RCB-1 peptide PubMed: 26509914
Deposition date: 2014-08-21 Original release date: 2015-08-31
Authors: Boldbaatar, Delgerbat; Elseedi, Hesham
Citation: Boldbaatar, Delgerbat; Gunasekera, Sunithi; Elseedi, Hesham; Goransson, Ulf. "Synthesis, Structural Characterization, and Bioactivity of the Stable Peptide RCB-1 from Ricinus communis" J. Nat. Prod. 78, 2545-2551 (2015).
Assembly members:
RCB-1, polymer, 19 residues, 2073.630 Da.
Natural source: Common Name: castor bean Taxonomy ID: 3988 Superkingdom: Eukaryota Kingdom: Viridiplantae Genus/species: Ricinus Communis
Experimental source: Production method: chemical synthesis Host organism: Ricinus communis (L.)
Entity Sequences (FASTA):
RCB-1: ARCCLVMPVPPFACVKFCS
- assigned_chemical_shifts
Data type | Count |
13C chemical shifts | 38 |
15N chemical shifts | 15 |
1H chemical shifts | 128 |
Additional metadata:
Assembly:
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | RCB-1 | 1 |
Entities:
Entity 1, RCB-1 19 residues - 2073.630 Da.
1 | ALA | ARG | CYS | CYS | LEU | VAL | MET | PRO | VAL | PRO | ||||
2 | PRO | PHE | ALA | CYS | VAL | LYS | PHE | CYS | SER |
Samples:
RCB-1_sample: RCB-1 1 mM; H2O 90%; D2O 10%
RCB-1_conditions_1: pH: 5; temperature: 290 K
RCB-1_conditions_2: pH: 5; temperature: 298 K
Experiments:
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
2D 1H-1H TOCSY | RCB-1_sample | isotropic | RCB-1_conditions_1 |
2D 1H-1H NOESY | RCB-1_sample | isotropic | RCB-1_conditions_1 |
2D DQF-COSY | RCB-1_sample | isotropic | RCB-1_conditions_1 |
2D 1H-15N HSQC | RCB-1_sample | isotropic | RCB-1_conditions_1 |
2D 1H-13C HSQC | RCB-1_sample | isotropic | RCB-1_conditions_1 |
Software:
CYANA v3.0, Guntert, Mumenthaler and Wuthrich - structure solution
NMR spectrometers:
- Bruker Avance 800 MHz
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts