BMRB Entry 25737
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR25737
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Title: The NMR solution structure of octyl-tridecaptin A1 in DPC micelles PubMed: 27688760
Deposition date: 2015-08-01 Original release date: 2016-09-22
Authors: Cochrane, Stephen; Findlay, Brandon; Bakhtiary, Alireza; Rodriguez-Lopez, Eva; Vederas, John
Citation: Cochrane, Stephen; Findlay, Brandon; Bakhtiary, Alireza; Acedo, Jeella; Rodriguez-Lopez, Eva; Mercier, Pascal; Vederas, John. "Antimicrobial lipopeptide tridecaptin A1 selectively binds to Gram-negative lipid II." Proc. Natl. Acad. Sci. U.S.A. 113, 11561-11566 (2016).
Assembly members:
entity, polymer, 13 residues, 1867.077 Da.
Natural source: Common Name: Paenibacillus terrae Taxonomy ID: 159743 Superkingdom: Bacteria Kingdom: not available Genus/species: Paenibacillus terrae
Experimental source: Production method: chemical synthesis Host organism: Paenibacillus terrae
Entity Sequences (FASTA):
entity: XXGXXSXXFEVXA
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 81 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | entity | 1 |
Entities:
Entity 1, entity 13 residues - 1867.077 Da.
| 1 | DVA | 4FO | GLY | DSN | DTR | SER | DAB | 4FO | PHE | GLU | ||||
| 2 | VAL | 28J | ALA |
Samples:
sample_1: entity mM; D2O 10%; H2O 90%; DPC 180 mM
sample_conditions_1: pH: 6; pressure: 1 atm; temperature: 273 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D 1H-1H TOCSY | sample_1 | isotropic | sample_conditions_1 |
| 2D 1H-1H NOESY | sample_1 | isotropic | sample_conditions_1 |
Software:
CYANA, G??ntert P. - refinement
NMR spectrometers:
- Varian INOVA 600 MHz