BMRB Entry 26636
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR26636
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Title: 1H and 15N Chemical Shifts of Intrinsically Disordered Dehydrin ERD14 at Various Temperature and pH Values
Deposition date: 2015-08-15 Original release date: 2015-09-15
Authors: Szalaine Agoston, Bianka
Citation: Kalmar, Lajos; Szalaine Agoston, Bianka; Magos, Zoltan; Felmery, Anna; Szabo, Beata; Tantos, Agnes; Murvai, Nikoletta; Csikos, Gyorgy; Vertomen, Didier; Hristova, Nevena; Kovacs, Denes; Lang, Andras; Buday, Laszlo; Han, Kyou-Hoon; Perczel, Andras; Tompa, Peter. "Interplay of structural disorder and induced folding in the chaperone activity of intrinsically disordered plant dehydrin ERD14 in vivo" Cell ., .-..
Assembly members:
ERD14, polymer, 185 residues, 20786.3 Da.
Natural source: Common Name: thale cress Taxonomy ID: 3702 Superkingdom: Eukaryota Kingdom: Viridiplantae Genus/species: Arabidopsis thaliana
Experimental source: Production method: recombinant technology Host organism: Escherichia coli
Entity Sequences (FASTA):
ERD14: MAEEIKNVPEQEVPKVATEE
SSAEVTDRGLFDFLGKKKDE
TKPEETPIASEFEQKVHISE
PEPEVKHESLLEKLHRSDSS
SSSSSEEEGSDGEKRKKKKE
KKKPTTEVEVKEEEKKGFME
KLKEKLPGHKKPEDGSAVAA
APVVVPPPVEEAHPVEKKGI
LEKIKEKLPGYHPKTTVEEE
KKDKE
Data type | Count |
15N chemical shifts | 916 |
1H chemical shifts | 916 |
Additional metadata:
Assembly:
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | ERD14 | 1 |
Entities:
Entity 1, ERD14 185 residues - 20786.3 Da.
1 | MET | ALA | GLU | GLU | ILE | LYS | ASN | VAL | PRO | GLU | ||||
2 | GLN | GLU | VAL | PRO | LYS | VAL | ALA | THR | GLU | GLU | ||||
3 | SER | SER | ALA | GLU | VAL | THR | ASP | ARG | GLY | LEU | ||||
4 | PHE | ASP | PHE | LEU | GLY | LYS | LYS | LYS | ASP | GLU | ||||
5 | THR | LYS | PRO | GLU | GLU | THR | PRO | ILE | ALA | SER | ||||
6 | GLU | PHE | GLU | GLN | LYS | VAL | HIS | ILE | SER | GLU | ||||
7 | PRO | GLU | PRO | GLU | VAL | LYS | HIS | GLU | SER | LEU | ||||
8 | LEU | GLU | LYS | LEU | HIS | ARG | SER | ASP | SER | SER | ||||
9 | SER | SER | SER | SER | SER | GLU | GLU | GLU | GLY | SER | ||||
10 | ASP | GLY | GLU | LYS | ARG | LYS | LYS | LYS | LYS | GLU | ||||
11 | LYS | LYS | LYS | PRO | THR | THR | GLU | VAL | GLU | VAL | ||||
12 | LYS | GLU | GLU | GLU | LYS | LYS | GLY | PHE | MET | GLU | ||||
13 | LYS | LEU | LYS | GLU | LYS | LEU | PRO | GLY | HIS | LYS | ||||
14 | LYS | PRO | GLU | ASP | GLY | SER | ALA | VAL | ALA | ALA | ||||
15 | ALA | PRO | VAL | VAL | VAL | PRO | PRO | PRO | VAL | GLU | ||||
16 | GLU | ALA | HIS | PRO | VAL | GLU | LYS | LYS | GLY | ILE | ||||
17 | LEU | GLU | LYS | ILE | LYS | GLU | LYS | LEU | PRO | GLY | ||||
18 | TYR | HIS | PRO | LYS | THR | THR | VAL | GLU | GLU | GLU | ||||
19 | LYS | LYS | ASP | LYS | GLU |
Samples:
sample_1: ERD14, [U-15N], 1 mM; DSS 1 mM; sodium phosphate 32 mM; potassium phosphate 22 mM; sodium chloride 8.6 mM; calcium chloride 0.1 mM; magnesium sulfate 1 mM; carbenicillin 50 mg/L; glucose.H2O 4 g/L; H2O 90%; D2O 10%
288K-6.58pH: pH: 6.58; pressure: 1 atm; temperature: 288 K
282.5K-6.58pH: pH: 6.58; pressure: 1 atm; temperature: 282.5 K
277K-6.58pH: pH: 6.58; pressure: 1 atm; temperature: 277 K
277K-6.94pH: pH: 6.94; pressure: 1 atm; temperature: 277 K
277K-7.29pH: pH: 7.29; pressure: 1 atm; temperature: 277 K
277K-7.42pH: pH: 7.42; pressure: 1 atm; temperature: 277 K
277K-7.57pH: pH: 7.57; pressure: 1 atm; temperature: 277 K
277K-7.70pH: pH: 7.70; pressure: 1 atm; temperature: 277 K
Experiments:
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
2D 1H-15N HSQC | sample_1 | isotropic | 288K-6.58pH |
2D 1H-15N HSQC | sample_1 | isotropic | 282.5K-6.58pH |
2D 1H-15N HSQC | sample_1 | isotropic | 277K-6.58pH |
2D 1H-15N HSQC | sample_1 | isotropic | 277K-6.94pH |
2D 1H-15N HSQC | sample_1 | isotropic | 277K-7.29pH |
2D 1H-15N HSQC | sample_1 | isotropic | 277K-7.42pH |
2D 1H-15N HSQC | sample_1 | isotropic | 277K-7.57pH |
2D 1H-15N HSQC | sample_1 | isotropic | 277K-7.70pH |
Software:
CARA v1.8.4.2, Rochus Keller - chemical shift assignment, peak picking
NMR spectrometers:
- Bruker DRX 500 MHz
Related Database Links:
UNP | P42763 |
BMRB | 16876 |
DBJ | BAA04569 BAE98985 |
GB | AAF17644 AAG40050 AAG41486 AAK00404 AAK62649 |
REF | NP_001185408 NP_177745 |
SP | P42763 |
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts