BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 5019

Title: 1H, 13C and 15N Chemical Shift Assignments of the N-terminal PAS Domain of mNPAS2   PubMed: 11824759

Deposition date: 2001-05-22 Original release date: 2002-04-05

Authors: Holdeman, Terra; Gardner, Kevin

Citation: Holdeman, Terra; Gardner, Kevin. "1H, 13C and 15N Chemical Shift Assignments of the N-terminal PAS Domain of mNPAS2"  J. Biomol. NMR 21, 383-384 (2001).

Assembly members:
neuronal PAS protein 2, polymer, 167 residues, 18715 Da.

Natural source:   Common Name: Mouse   Taxonomy ID: 10090   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Mus musculus

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
neuronal PAS protein 2: GAMASFLSNEEFTQLMLEAL DGFVIVVTTDGSIIYVSDSI TPLLGHLPADVMDQNLLNFL PEQEHSEVYKILSSHMLVTD SPSPEFLKSDNDLEFYCHLL RGSLNPKEFPTYEYIKFVGN FRSYNNVPSPSCNGFDNTLS RPCHVPLGKDVCFIATVRLA TPQFLKE

Data sets:
Data typeCount
13C chemical shifts466
15N chemical shifts154
1H chemical shifts244

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1mNPAS2(78-240) monomer1

Entities:

Entity 1, mNPAS2(78-240) monomer 167 residues - 18715 Da.

1   GLYALAMETALASERPHELEUSERASNGLU
2   GLUPHETHRGLNLEUMETLEUGLUALALEU
3   ASPGLYPHEVALILEVALVALTHRTHRASP
4   GLYSERILEILETYRVALSERASPSERILE
5   THRPROLEULEUGLYHISLEUPROALAASP
6   VALMETASPGLNASNLEULEUASNPHELEU
7   PROGLUGLNGLUHISSERGLUVALTYRLYS
8   ILELEUSERSERHISMETLEUVALTHRASP
9   SERPROSERPROGLUPHELEULYSSERASP
10   ASNASPLEUGLUPHETYRCYSHISLEULEU
11   ARGGLYSERLEUASNPROLYSGLUPHEPRO
12   THRTYRGLUTYRILELYSPHEVALGLYASN
13   PHEARGSERTYRASNASNVALPROSERPRO
14   SERCYSASNGLYPHEASPASNTHRLEUSER
15   ARGPROCYSHISVALPROLEUGLYLYSASP
16   VALCYSPHEILEALATHRVALARGLEUALA
17   THRPROGLNPHELEULYSGLU

Samples:

sample_1: neuronal PAS protein 2, [U-13C; U-15N], 1.0 mM

sample_2: neuronal PAS protein 2, [U-99% 2H; U-15N], 1.2 mM

condition_1: pH: 7.5; temperature: 303 K

Experiments:

NameSampleSample stateSample conditions
HNCACBnot availablenot availablenot available
CBCA(CO)NHnot availablenot availablenot available
HNCOnot availablenot availablenot available
(HCA)CO(CA)NHnot availablenot availablenot available
HNHAnot availablenot availablenot available
3D 15N-edited NOESYnot availablenot availablenot available

Software:

NMRView v4.0 - assignments

NMRPipe v1.8 - data processing

NMR spectrometers:

  • Varian Inova 500 MHz
  • Varian Inova 600 MHz

Related Database Links:

GB AAB47249 AAI09167 EDL14555
REF NP_001101684 NP_032745 XP_008765253 XP_008765254 XP_008765255
SP P97460

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts