==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 07-SEP-05 2AYD . COMPND 2 MOLECULE: WRKY TRANSCRIPTION FACTOR 1; . SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; . AUTHOR M.R.DUAN,J.NAN,Y.LI,X.D.SU . 76 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5593.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 36 47.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 28 36.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 6.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 293 A S 0 0 90 0, 0.0 66,-2.2 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 175.1 15.2 4.5 -0.6 2 294 A R E +A 66 0A 168 64,-0.2 2,-0.4 2,-0.0 64,-0.2 -0.967 360.0 166.1-129.4 131.2 18.8 3.3 -0.1 3 295 A I E -A 65 0A 107 62,-2.1 62,-3.2 -2,-0.4 2,-0.4 -0.997 18.5-151.5-141.4 135.9 20.2 0.3 1.7 4 296 A V E -A 64 0A 71 -2,-0.4 2,-0.4 60,-0.2 60,-0.2 -0.870 10.9-172.1-107.6 140.0 23.7 -1.2 1.6 5 297 A V E -A 63 0A 54 58,-2.8 58,-3.1 -2,-0.4 2,-0.4 -0.992 8.6-154.8-131.3 136.9 24.5 -4.9 2.1 6 298 A H E -A 62 0A 116 -2,-0.4 2,-0.4 56,-0.2 56,-0.2 -0.930 9.7-168.9-110.3 138.8 27.9 -6.5 2.4 7 299 A T E -A 61 0A 35 54,-2.2 54,-2.6 -2,-0.4 2,-0.9 -0.995 19.1-140.9-129.9 127.2 28.4 -10.2 1.6 8 300 A Q E +A 60 0A 135 -2,-0.4 2,-0.3 52,-0.2 52,-0.2 -0.779 52.9 131.3 -86.9 105.3 31.6 -12.2 2.4 9 301 A T - 0 0 32 50,-2.1 -2,-0.1 -2,-0.9 5,-0.0 -0.984 59.2-146.2-159.0 144.9 31.9 -14.3 -0.7 10 302 A L S S+ 0 0 157 -2,-0.3 2,-0.2 51,-0.0 -1,-0.1 0.524 84.4 82.0 -88.1 -10.1 34.4 -15.4 -3.3 11 303 A F S S- 0 0 162 2,-0.1 -2,-0.1 1,-0.1 3,-0.0 -0.535 77.8-134.1 -90.7 163.4 31.7 -15.5 -6.0 12 304 A D S S+ 0 0 86 -2,-0.2 2,-0.4 41,-0.0 -1,-0.1 0.451 84.4 62.7-104.0 0.7 30.4 -12.4 -7.8 13 305 A I - 0 0 132 48,-0.0 2,-0.5 2,-0.0 -2,-0.1 -0.986 64.9-158.2-124.7 135.7 26.7 -13.0 -7.5 14 306 A V - 0 0 33 -2,-0.4 2,-0.9 -5,-0.0 -5,-0.0 -0.948 17.0-134.7-109.8 128.2 24.8 -13.1 -4.2 15 307 A N + 0 0 148 -2,-0.5 4,-0.1 1,-0.1 -2,-0.0 -0.787 30.6 170.3 -81.9 104.7 21.4 -14.8 -4.0 16 308 A D - 0 0 29 -2,-0.9 -1,-0.1 2,-0.3 3,-0.1 0.279 58.2-101.9-100.2 11.0 19.3 -12.3 -2.1 17 309 A G S S+ 0 0 26 1,-0.4 2,-0.2 56,-0.1 -2,-0.1 0.173 96.0 92.8 88.6 -11.5 16.0 -14.1 -2.7 18 310 A Y S S- 0 0 57 55,-0.2 -1,-0.4 24,-0.0 2,-0.4 -0.594 74.0-119.8-103.3 168.8 15.0 -11.7 -5.4 19 311 A R - 0 0 121 -2,-0.2 22,-2.6 -3,-0.1 23,-0.4 -0.896 30.5-172.3-115.2 144.1 15.5 -11.9 -9.2 20 312 A W E -B 40 0A 46 -2,-0.4 2,-0.5 20,-0.3 20,-0.2 -0.929 20.5-145.8-138.8 149.8 17.4 -9.3 -11.2 21 313 A R E -B 39 0A 161 18,-2.6 18,-2.1 -2,-0.3 2,-0.3 -0.985 22.3-136.3-120.7 120.2 18.2 -8.3 -14.7 22 314 A K E +B 38 0A 94 -2,-0.5 16,-0.3 16,-0.2 3,-0.1 -0.578 27.6 169.1 -72.1 137.2 21.6 -6.8 -15.4 23 315 A Y E - 0 0 106 14,-2.8 2,-0.3 1,-0.3 15,-0.2 0.487 57.2 -10.5-125.4 -9.6 21.5 -3.8 -17.7 24 316 A G E -B 37 0A 25 13,-1.2 13,-2.8 2,-0.0 2,-0.3 -0.993 48.1-138.0-175.1 176.0 25.0 -2.3 -17.5 25 317 A Q E -B 36 0A 108 -2,-0.3 2,-0.3 11,-0.2 11,-0.2 -0.981 10.6-166.6-145.0 147.3 28.5 -2.1 -16.0 26 318 A K E -B 35 0A 134 9,-2.3 9,-3.0 -2,-0.3 -2,-0.0 -0.983 31.8-101.7-132.4 152.3 30.8 0.7 -15.1 27 319 A S - 0 0 114 -2,-0.3 2,-0.5 7,-0.2 6,-0.1 -0.318 31.5-142.8 -64.4 154.5 34.5 0.7 -14.2 28 320 A V > - 0 0 24 3,-0.4 3,-1.6 5,-0.3 2,-0.2 -0.982 15.8-121.4-127.0 120.1 35.5 0.9 -10.5 29 321 A K T 3 S+ 0 0 201 -2,-0.5 26,-0.1 1,-0.2 0, 0.0 -0.431 97.2 11.2 -58.0 126.2 38.5 2.8 -9.3 30 322 A G T 3 S+ 0 0 64 1,-0.2 -1,-0.2 -2,-0.2 3,-0.0 0.447 109.8 91.3 88.3 0.5 40.8 0.5 -7.4 31 323 A S < - 0 0 18 -3,-1.6 -3,-0.4 2,-0.1 -1,-0.2 -0.978 68.8-139.5-126.8 143.6 39.2 -2.8 -8.3 32 324 A P S S+ 0 0 116 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.753 85.9 67.9 -63.6 -22.6 39.9 -5.2 -11.2 33 325 A Y S S- 0 0 116 1,-0.1 -5,-0.3 20,-0.1 -2,-0.1 -0.602 81.0-116.3-111.1 155.7 36.1 -5.8 -11.7 34 326 A P - 0 0 46 0, 0.0 2,-0.5 0, 0.0 19,-0.4 -0.294 26.1-109.1 -82.8 172.6 33.3 -3.6 -12.8 35 327 A R E -B 26 0A 70 -9,-3.0 -9,-2.3 17,-0.1 2,-0.4 -0.903 35.6-145.0 -95.6 129.9 30.2 -2.5 -10.9 36 328 A S E -BC 25 51A 14 15,-2.5 15,-2.2 -2,-0.5 2,-0.5 -0.816 5.6-149.1-104.4 134.9 27.2 -4.2 -12.3 37 329 A Y E +BC 24 50A 47 -13,-2.8 -14,-2.8 -2,-0.4 -13,-1.2 -0.908 20.4 176.0-109.1 133.5 23.8 -2.5 -12.5 38 330 A Y E -BC 22 49A 35 11,-2.9 11,-2.2 -2,-0.5 2,-0.4 -0.923 21.4-151.3-132.8 151.9 20.5 -4.4 -12.1 39 331 A R E -BC 21 48A 137 -18,-2.1 -18,-2.6 -2,-0.3 9,-0.3 -0.945 40.7 -97.9-112.7 147.8 16.8 -3.8 -12.0 40 332 A C E -B 20 0A 8 7,-2.8 -20,-0.3 -2,-0.4 5,-0.1 -0.359 28.9-139.1 -55.6 141.9 14.4 -6.1 -10.1 41 333 A S + 0 0 24 -22,-2.6 -21,-0.2 2,-0.1 -1,-0.1 0.599 67.9 110.6 -84.3 -8.4 12.8 -8.5 -12.6 42 334 A S S > S- 0 0 32 -23,-0.4 3,-2.3 1,-0.1 28,-0.1 -0.461 83.7 -98.5 -74.3 132.2 9.3 -8.3 -11.1 43 335 A P T 3 S+ 0 0 121 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 -0.214 102.6 0.1 -54.4 126.4 6.9 -6.6 -13.4 44 336 A G T 3 S+ 0 0 72 1,-0.3 -2,-0.1 -4,-0.1 -3,-0.1 0.414 91.8 143.1 80.4 -3.0 6.4 -2.9 -12.4 45 337 A C < - 0 0 18 -3,-2.3 -1,-0.3 1,-0.1 24,-0.1 -0.550 41.6-153.9 -75.2 133.6 8.8 -3.1 -9.5 46 338 A P + 0 0 88 0, 0.0 -1,-0.1 0, 0.0 2,-0.1 0.426 52.4 121.4 -82.7 -1.5 10.9 0.1 -9.0 47 339 A V + 0 0 3 21,-0.1 -7,-2.8 20,-0.1 2,-0.3 -0.395 32.9 172.5 -75.9 140.6 13.8 -1.5 -7.2 48 340 A K E -CD 39 66A 95 18,-2.1 18,-2.7 -9,-0.3 2,-0.3 -0.920 4.6-177.7-131.2 160.3 17.3 -1.3 -8.6 49 341 A K E -CD 38 65A 11 -11,-2.2 -11,-2.9 -2,-0.3 2,-0.3 -0.990 13.1-152.0-150.7 159.4 20.7 -2.3 -7.2 50 342 A H E -CD 37 64A 37 14,-2.0 14,-2.6 -2,-0.3 2,-0.4 -0.973 11.6-155.6-131.2 156.2 24.4 -2.2 -8.1 51 343 A V E +CD 36 63A 9 -15,-2.2 -15,-2.5 -2,-0.3 2,-0.3 -0.991 17.0 162.9-135.4 129.9 27.1 -4.6 -7.1 52 344 A E E - D 0 62A 41 10,-2.1 10,-3.2 -2,-0.4 2,-0.3 -0.996 37.2-114.5-144.3 148.1 30.8 -4.2 -6.8 53 345 A R E - D 0 61A 21 -19,-0.4 8,-0.2 -2,-0.3 5,-0.1 -0.650 42.9-110.2 -79.0 139.3 33.7 -6.0 -5.1 54 346 A S - 0 0 10 6,-2.8 6,-0.1 3,-0.4 -1,-0.1 -0.352 18.5-162.0 -65.3 144.6 35.4 -4.0 -2.4 55 347 A S S S+ 0 0 61 -26,-0.1 3,-0.3 -24,-0.1 -1,-0.1 0.454 93.0 57.8 -98.0 -9.1 38.9 -2.6 -2.8 56 348 A H S S+ 0 0 182 1,-0.3 2,-0.3 4,-0.1 -1,-0.0 0.855 129.9 5.8 -84.1 -38.6 39.1 -2.1 1.0 57 349 A D S > S- 0 0 50 3,-0.1 3,-2.4 1,-0.0 -3,-0.4 -0.833 71.6-160.6-145.5 97.0 38.5 -5.7 1.8 58 350 A T T 3 S+ 0 0 96 -2,-0.3 -4,-0.0 1,-0.3 -3,-0.0 0.540 83.7 74.9 -70.8 -1.6 38.3 -7.8 -1.3 59 351 A K T 3 S+ 0 0 93 -51,-0.1 -50,-2.1 -6,-0.1 2,-0.4 0.605 88.5 85.2 -73.2 -13.7 36.5 -10.7 0.4 60 352 A L E < -A 8 0A 26 -3,-2.4 -6,-2.8 -52,-0.2 2,-0.5 -0.800 61.0-158.6-102.0 138.1 33.4 -8.4 0.3 61 353 A L E -AD 7 53A 3 -54,-2.6 -54,-2.2 -2,-0.4 2,-0.6 -0.905 18.8-149.8-100.1 133.2 30.8 -7.8 -2.3 62 354 A I E -AD 6 52A 28 -10,-3.2 -10,-2.1 -2,-0.5 2,-0.5 -0.921 13.0-171.6-110.5 116.4 29.1 -4.5 -1.8 63 355 A T E -AD 5 51A 2 -58,-3.1 -58,-2.8 -2,-0.6 2,-0.6 -0.935 5.3-165.0-111.9 130.8 25.5 -4.2 -2.9 64 356 A T E -AD 4 50A 25 -14,-2.6 -14,-2.0 -2,-0.5 2,-0.3 -0.964 9.3-165.3-117.8 114.2 23.6 -0.9 -3.0 65 357 A Y E -AD 3 49A 29 -62,-3.2 -62,-2.1 -2,-0.6 2,-0.4 -0.757 4.7-168.7 -97.4 145.7 19.8 -1.2 -3.3 66 358 A E E +AD 2 48A 91 -18,-2.7 -18,-2.1 -2,-0.3 -64,-0.2 -0.999 50.1 15.6-132.5 132.3 17.4 1.7 -4.2 67 359 A G S S- 0 0 27 -66,-2.2 2,-0.4 -2,-0.4 -20,-0.1 -0.217 78.5 -85.8 100.4 167.8 13.7 1.6 -3.9 68 360 A K - 0 0 158 -2,-0.1 -21,-0.1 -21,-0.0 2,-0.1 -0.955 39.3-115.8-117.2 131.8 11.1 -0.6 -2.2 69 361 A H - 0 0 48 -2,-0.4 4,-0.1 1,-0.1 -24,-0.0 -0.436 12.8-154.3 -64.8 139.5 9.7 -3.8 -3.7 70 362 A D S S+ 0 0 101 -2,-0.1 2,-0.3 -28,-0.1 -1,-0.1 0.003 76.8 43.0 -99.1 26.7 6.0 -3.7 -4.5 71 363 A H S S- 0 0 41 -29,-0.0 2,-0.1 3,-0.0 -2,-0.1 -0.972 89.3 -91.0-162.7 161.3 5.8 -7.5 -4.2 72 364 A D - 0 0 138 -2,-0.3 -2,-0.1 1,-0.2 0, 0.0 -0.377 62.0 -71.5 -76.3 160.3 7.0 -10.5 -2.2 73 365 A M - 0 0 105 1,-0.1 -1,-0.2 -2,-0.1 -55,-0.2 -0.280 68.0-104.5 -48.2 131.6 10.1 -12.4 -2.8 74 366 A P - 0 0 31 0, 0.0 -1,-0.1 0, 0.0 2,-0.1 -0.233 36.7 -97.6 -68.3 154.9 9.3 -14.4 -6.0 75 367 A P 0 0 112 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.381 360.0 360.0 -70.9 151.2 8.5 -18.1 -5.8 76 368 A G 0 0 121 -2,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.846 360.0 360.0 106.9 360.0 11.2 -20.7 -6.6