==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 11-DEC-98 2B3I . COMPND 2 MOLECULE: PROTEIN (PLASTOCYANIN); . SOURCE 2 ORGANISM_SCIENTIFIC: PROCHLOROTHRIX HOLLANDICA; . AUTHOR C.R.BABU,B.F.VOLKMAN,G.S.BULLERJAHN . 97 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5222.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 59 60.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 11 11.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 24 24.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 13 13.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 2 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 96 0, 0.0 28,-0.1 0, 0.0 22,-0.1 0.000 360.0 360.0 360.0 85.2 -12.5 -10.5 -1.3 2 2 A S + 0 0 98 26,-0.2 2,-0.2 1,-0.1 27,-0.2 0.956 360.0 175.9 62.5 93.1 -11.4 -7.6 -3.5 3 3 A V E -a 29 0A 33 25,-2.2 27,-3.6 18,-0.0 2,-0.3 -0.682 18.4-143.7-120.6 174.7 -10.1 -4.9 -1.2 4 4 A Q E -a 30 0A 96 25,-0.3 2,-0.7 -2,-0.2 27,-0.3 -0.995 10.1-135.5-143.5 146.1 -8.5 -1.5 -1.8 5 5 A I E -a 31 0A 0 25,-3.0 27,-1.7 -2,-0.3 2,-0.5 -0.898 20.7-157.9-106.4 108.8 -5.8 0.5 -0.0 6 6 A K E -aB 32 17A 98 11,-3.2 11,-2.9 -2,-0.7 2,-0.8 -0.736 6.7-146.7 -88.7 129.3 -6.7 4.1 0.4 7 7 A M E +aB 33 16A 0 25,-2.4 28,-1.6 -2,-0.5 27,-1.4 -0.845 66.6 13.5-100.7 103.8 -3.8 6.5 0.9 8 8 A G S S- 0 0 0 7,-3.3 2,-0.2 -2,-0.8 9,-0.1 0.010 73.6-114.0 110.2 144.1 -4.8 9.4 3.2 9 9 A T > - 0 0 4 4,-2.6 3,-0.6 25,-0.1 4,-0.4 -0.664 29.5-108.1-108.1 164.5 -7.7 10.0 5.6 10 10 A D T 3 S+ 0 0 144 1,-0.3 -1,-0.1 -2,-0.2 2,-0.1 0.636 114.5 75.9 -63.7 -12.8 -10.5 12.6 5.5 11 11 A K T 3 S- 0 0 145 2,-0.2 -1,-0.3 1,-0.1 -2,-0.0 -0.141 117.6-110.3 -90.8 37.3 -8.6 14.1 8.3 12 12 A Y S < S+ 0 0 187 -3,-0.6 -2,-0.2 1,-0.2 -1,-0.1 0.750 77.5 141.8 39.0 29.2 -6.1 15.5 5.9 13 13 A A - 0 0 24 -4,-0.4 -4,-2.6 2,-0.1 2,-1.2 -0.903 53.7-136.4-105.3 117.5 -3.9 12.9 7.5 14 14 A P + 0 0 28 0, 0.0 2,-0.3 0, 0.0 22,-0.1 -0.596 55.2 126.0 -74.9 96.5 -1.5 11.0 5.1 15 15 A L - 0 0 36 -2,-1.2 -7,-3.3 75,-0.1 2,-0.4 -0.979 63.4 -97.4-150.2 157.0 -1.8 7.5 6.3 16 16 A Y E -B 7 0A 0 -2,-0.3 -9,-0.2 75,-0.2 75,-0.2 -0.632 46.1-129.1 -81.0 130.5 -2.6 4.1 4.9 17 17 A E E S+B 6 0A 85 -11,-2.9 -11,-3.2 -2,-0.4 2,-0.1 -0.999 92.7 27.7-139.6 134.0 -6.2 2.9 5.3 18 18 A P S S- 0 0 59 0, 0.0 75,-0.4 0, 0.0 -1,-0.3 0.406 83.2-150.9 -75.0 139.3 -7.2 0.5 6.3 19 19 A K S S+ 0 0 135 73,-0.1 74,-1.4 -2,-0.1 2,-0.4 0.830 87.9 30.4 -39.6 -39.7 -4.0 0.4 8.3 20 20 A A E S-d 93 0B 69 72,-0.2 2,-0.3 2,-0.0 74,-0.2 -0.953 72.5-176.1-126.4 145.2 -4.5 -3.3 8.1 21 21 A L E -d 94 0B 15 72,-1.0 74,-1.1 -2,-0.4 2,-0.4 -0.998 5.2-163.9-142.2 142.1 -6.1 -5.4 5.4 22 22 A S E +d 95 0B 72 -2,-0.3 2,-0.3 72,-0.2 74,-0.2 -0.967 17.1 154.5-128.9 143.8 -6.8 -9.1 5.1 23 23 A I E -d 96 0B 5 72,-2.4 74,-4.2 -2,-0.4 2,-0.2 -0.838 36.3 -94.8-150.1-175.5 -7.7 -11.2 2.1 24 24 A S > - 0 0 57 73,-0.3 3,-2.2 72,-0.3 2,-1.1 -0.588 51.5 -79.0-106.7 170.2 -7.6 -14.8 0.8 25 25 A A T 3 S+ 0 0 58 1,-0.3 48,-0.2 -2,-0.2 49,-0.1 -0.586 124.3 23.2 -72.7 101.5 -5.1 -16.6 -1.4 26 26 A G T 3 S+ 0 0 45 -2,-1.1 -1,-0.3 46,-0.5 47,-0.2 0.288 95.2 125.2 123.5 -3.3 -6.0 -15.3 -4.9 27 27 A D < - 0 0 29 -3,-2.2 45,-2.5 44,-0.1 2,-0.3 -0.158 54.7-120.8 -77.0 176.5 -7.7 -12.1 -3.8 28 28 A T E - C 0 71A 33 43,-0.2 -25,-2.2 -3,-0.1 2,-0.4 -0.878 10.6-153.8-122.7 154.6 -6.8 -8.6 -5.1 29 29 A V E -aC 3 70A 1 41,-2.6 41,-0.6 -2,-0.3 -25,-0.3 -0.904 15.4-164.9-132.5 103.2 -5.7 -5.5 -3.3 30 30 A E E -aC 4 69A 58 -27,-3.6 -25,-3.0 -2,-0.4 2,-0.3 -0.266 5.1-149.6 -80.0 170.2 -6.4 -2.2 -5.0 31 31 A F E +aC 5 68A 1 37,-1.0 37,-1.0 -27,-0.3 36,-0.4 -0.920 16.5 173.6-149.0 118.1 -4.8 1.1 -4.2 32 32 A V E -a 6 0A 25 -27,-1.7 -25,-2.4 -2,-0.3 2,-0.7 -0.927 32.2-119.7-125.2 149.4 -6.4 4.6 -4.5 33 33 A M E +a 7 0A 16 32,-2.6 -25,-0.1 -2,-0.3 3,-0.1 -0.801 26.0 180.0 -92.7 112.7 -5.1 8.0 -3.4 34 34 A N - 0 0 50 -27,-1.4 2,-0.3 -2,-0.7 -26,-0.2 0.992 55.1 -64.4 -71.5 -67.5 -7.5 9.6 -1.0 35 35 A K S S+ 0 0 55 -28,-1.6 -1,-0.3 1,-0.2 -25,-0.0 -0.930 98.3 74.4-167.7-175.0 -5.6 12.9 -0.4 36 36 A V S S- 0 0 42 -2,-0.3 -1,-0.2 -3,-0.1 -2,-0.1 0.985 86.7-142.4 55.2 67.2 -2.4 14.4 1.0 37 37 A G S S+ 0 0 39 -3,-0.1 2,-0.2 25,-0.1 25,-0.1 -0.287 71.1 74.4-100.7-172.5 -0.2 13.4 -1.9 38 38 A P + 0 0 33 0, 0.0 2,-0.2 0, 0.0 24,-0.2 0.631 63.8 172.8 -75.0 178.5 1.7 12.6 -3.7 39 39 A H E +G 61 0C 0 22,-0.7 22,-0.8 -2,-0.2 2,-0.3 -0.653 11.3 176.9-133.5-171.2 1.6 8.9 -2.9 40 40 A N E - 0 0 0 -2,-0.2 2,-0.3 20,-0.2 18,-0.2 -0.949 33.7-103.2-175.4-173.2 3.0 5.6 -4.1 41 41 A V E +G 57 0C 2 16,-1.8 16,-2.5 -2,-0.3 2,-0.6 -0.775 43.8 154.2-138.3 89.7 3.2 1.9 -3.5 42 42 A I E -E 81 0B 14 39,-1.1 39,-1.7 -2,-0.3 10,-0.1 -0.904 30.8-147.7-122.2 100.9 6.5 0.7 -2.0 43 43 A F E -E 80 0B 11 -2,-0.6 37,-0.4 9,-0.4 3,-0.1 -0.141 6.9-142.8 -61.8 160.5 6.2 -2.5 0.0 44 44 A D E - 0 0 92 35,-1.8 2,-0.2 1,-0.3 36,-0.2 0.887 63.0 -59.5 -90.6 -50.6 8.4 -3.0 3.1 45 45 A K E -E 79 0B 153 34,-0.6 34,-0.9 7,-0.1 -1,-0.3 -0.749 44.6-147.7 167.2 146.0 9.1 -6.8 2.7 46 46 A V - 0 0 23 -2,-0.2 3,-0.1 32,-0.2 32,-0.1 -0.893 27.3-101.8-128.7 158.4 7.2 -10.1 2.5 47 47 A P > - 0 0 65 0, 0.0 3,-1.2 0, 0.0 5,-0.1 -0.284 64.7 -57.6 -75.0 163.1 8.0 -13.6 3.5 48 48 A A T 3 S+ 0 0 102 1,-0.2 3,-0.1 3,-0.1 0, 0.0 -0.049 118.2 54.7 -39.9 134.9 9.1 -16.3 1.1 49 49 A G T 3 S+ 0 0 58 1,-0.5 -1,-0.2 -3,-0.1 2,-0.1 -0.459 102.2 42.3 135.5 -61.4 6.5 -16.7 -1.6 50 50 A E S < S- 0 0 49 -3,-1.2 -1,-0.5 25,-0.1 2,-0.3 -0.354 77.1-117.2-105.4-172.8 6.0 -13.3 -3.1 51 51 A S >> + 0 0 64 1,-0.2 4,-1.9 -2,-0.1 3,-0.6 -0.687 33.2 167.0-131.7 78.3 8.3 -10.5 -4.1 52 52 A A H 3> S+ 0 0 0 -2,-0.3 2,-2.5 1,-0.3 4,-1.3 0.937 78.8 60.1 -54.4 -51.3 7.5 -7.4 -2.0 53 53 A P H 34 S+ 0 0 103 0, 0.0 -1,-0.3 0, 0.0 -11,-0.0 -0.238 112.7 39.5 -75.1 51.0 10.8 -5.8 -3.2 54 54 A A H <4 S+ 0 0 70 -2,-2.5 -2,-0.2 -3,-0.6 -4,-0.0 0.255 104.2 57.4-159.1 -48.6 9.5 -6.0 -6.8 55 55 A L H < S+ 0 0 62 -4,-1.9 -3,-0.1 -3,-0.2 -14,-0.0 0.717 87.7 107.9 -67.9 -21.1 5.8 -5.2 -6.9 56 56 A S < - 0 0 29 -4,-1.3 -14,-0.3 -5,-0.3 2,-0.2 0.051 55.1-160.5 -50.7 167.2 6.7 -1.9 -5.3 57 57 A N E -G 41 0C 72 -16,-2.5 -16,-1.8 -14,-0.0 -2,-0.1 -0.770 20.3-174.3-160.6 108.1 6.6 1.2 -7.3 58 58 A T E + 0 0 97 -2,-0.2 2,-1.6 1,-0.2 -16,-0.1 0.099 54.8 117.7 -89.5 21.3 8.4 4.5 -6.5 59 59 A K E - 0 0 162 -18,-0.1 -1,-0.2 2,-0.0 -20,-0.1 -0.366 57.0-161.0 -85.8 55.7 6.6 6.1 -9.5 60 60 A L E - 0 0 78 -2,-1.6 2,-0.6 1,-0.1 -20,-0.2 -0.088 2.3-151.9 -40.4 127.5 4.8 8.5 -7.1 61 61 A A E -G 39 0C 31 -22,-0.8 -22,-0.7 1,-0.2 4,-0.1 -0.949 16.9-170.1-114.4 117.2 1.9 9.9 -9.0 62 62 A I + 0 0 121 -2,-0.6 -1,-0.2 -24,-0.2 -25,-0.1 0.910 63.9 97.5 -68.3 -44.0 0.7 13.4 -8.1 63 63 A A S S- 0 0 70 1,-0.1 2,-0.3 -26,-0.0 -30,-0.1 -0.265 82.0-125.4 -50.5 120.2 -2.5 13.0 -10.2 64 64 A P + 0 0 115 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.556 62.8 85.5 -74.9 131.2 -5.2 11.9 -7.7 65 65 A G S S- 0 0 35 -2,-0.3 -32,-2.6 -4,-0.1 2,-1.1 -0.975 85.5 -39.9 168.8-167.3 -7.0 8.7 -8.6 66 66 A S - 0 0 61 -2,-0.3 -34,-0.3 -34,-0.2 3,-0.1 -0.750 47.3-161.2 -90.3 97.3 -7.0 5.0 -8.4 67 67 A F - 0 0 42 -2,-1.1 2,-0.3 -36,-0.4 -1,-0.2 0.908 50.0 -76.3 -37.5 -76.3 -3.3 4.0 -8.9 68 68 A Y E -C 31 0A 62 -37,-1.0 -37,-1.0 -3,-0.1 2,-0.3 -0.970 36.7-106.1-178.1 174.3 -4.0 0.4 -9.8 69 69 A S E -C 30 0A 61 -2,-0.3 2,-0.3 -39,-0.2 -39,-0.2 -0.810 22.6-170.2-118.8 159.8 -4.8 -3.1 -8.6 70 70 A V E -C 29 0A 36 -41,-0.6 -41,-2.6 -2,-0.3 2,-0.3 -0.979 15.1-136.6-152.2 137.0 -2.8 -6.2 -8.1 71 71 A T E -C 28 0A 89 -2,-0.3 2,-0.2 -43,-0.2 -43,-0.2 -0.697 20.6-167.2 -95.9 147.2 -3.7 -9.8 -7.3 72 72 A L + 0 0 14 -45,-2.5 -46,-0.5 -2,-0.3 -48,-0.1 -0.754 22.1 170.0-126.0 172.4 -1.8 -12.0 -4.8 73 73 A G + 0 0 35 -2,-0.2 -1,-0.1 -48,-0.2 -46,-0.1 0.402 48.2 102.7-148.6 -44.8 -1.7 -15.7 -3.9 74 74 A T S S- 0 0 32 -25,-0.1 2,-0.2 1,-0.1 -1,-0.1 -0.323 71.8-125.6 -55.8 123.9 1.2 -16.3 -1.6 75 75 A P + 0 0 92 0, 0.0 2,-0.3 0, 0.0 22,-0.2 -0.470 63.2 71.7 -75.0 143.8 -0.1 -16.7 1.9 76 76 A G E S- F 0 96B 27 20,-0.7 20,-2.0 -2,-0.2 2,-0.5 -0.830 83.2 -58.6 142.3-178.9 1.3 -14.5 4.7 77 77 A T E - F 0 95B 77 -2,-0.3 2,-0.4 18,-0.2 18,-0.3 -0.882 44.4-160.0-103.8 125.3 1.3 -10.9 5.9 78 78 A Y E - F 0 94B 2 16,-3.7 16,-3.8 -2,-0.5 2,-0.3 -0.856 5.5-164.3-106.9 138.9 2.6 -8.2 3.6 79 79 A S E +EF 45 93B 32 -34,-0.9 -35,-1.8 -2,-0.4 -34,-0.6 -0.742 12.6 163.0-116.7 165.3 3.8 -4.8 4.8 80 80 A F E -EF 43 92B 1 12,-1.5 12,-0.8 -37,-0.4 2,-0.3 -0.934 14.1-157.7-163.7-178.1 4.4 -1.5 3.0 81 81 A Y E -EF 42 91B 72 -39,-1.7 -39,-1.1 -2,-0.3 2,-0.3 -0.976 27.8 -96.3-167.9 162.4 5.0 2.2 3.4 82 82 A C - 0 0 0 8,-1.4 8,-0.1 3,-0.8 7,-0.1 -0.619 20.5-146.8 -88.2 147.7 4.8 5.6 1.6 83 83 A T S S+ 0 0 50 -2,-0.3 3,-0.4 1,-0.1 -1,-0.1 0.955 101.2 29.1 -76.1 -55.0 7.8 7.1 0.0 84 84 A P S S+ 0 0 55 0, 0.0 2,-0.7 0, 0.0 3,-0.4 0.803 125.2 50.7 -75.0 -31.2 7.0 10.8 0.6 85 85 A H S >S+ 0 0 21 1,-0.2 5,-0.8 5,-0.1 -3,-0.8 -0.597 71.0 118.0-107.5 68.0 5.0 9.9 3.7 86 86 A R T 5S+ 0 0 207 -2,-0.7 -1,-0.2 -3,-0.4 -3,-0.1 0.688 84.3 34.0-101.2 -27.5 7.5 7.7 5.6 87 87 A G T 5S+ 0 0 73 -3,-0.4 -2,-0.1 1,-0.1 -1,-0.0 0.650 103.1 72.8 -99.3 -22.4 7.9 10.0 8.6 88 88 A A T 5S- 0 0 66 -4,-0.2 -1,-0.1 2,-0.1 -2,-0.1 0.607 116.5-109.4 -67.2 -10.9 4.3 11.1 8.7 89 89 A G T 5 + 0 0 38 1,-0.1 2,-0.6 -7,-0.1 -73,-0.1 0.944 63.7 155.0 80.2 54.8 3.6 7.6 9.9 90 90 A M < + 0 0 0 -5,-0.8 -8,-1.4 -75,-0.2 2,-0.3 -0.707 18.7 133.6-115.9 77.9 1.9 6.2 6.8 91 91 A V E + F 0 81B 66 -2,-0.6 -75,-0.2 -10,-0.2 2,-0.2 -0.928 23.2 171.2-126.6 150.5 2.4 2.5 6.9 92 92 A G E - F 0 80B 1 -12,-0.8 -12,-1.5 -2,-0.3 2,-0.3 -0.760 16.3-139.2-142.2-173.3 -0.0 -0.4 6.4 93 93 A T E -dF 20 79B 44 -74,-1.4 -72,-1.0 -75,-0.4 2,-0.3 -0.978 4.7-152.4-152.9 159.6 -0.2 -4.2 6.0 94 94 A I E -dF 21 78B 2 -16,-3.8 -16,-3.7 -2,-0.3 2,-0.4 -0.968 5.4-154.6-137.0 151.2 -2.0 -6.9 4.0 95 95 A T E -dF 22 77B 35 -74,-1.1 -72,-2.4 -2,-0.3 2,-0.5 -0.987 5.2-165.7-130.4 138.4 -2.9 -10.5 4.7 96 96 A V E dF 23 76B 1 -20,-2.0 -20,-0.7 -2,-0.4 -72,-0.3 -0.787 360.0 360.0-124.8 85.9 -3.5 -13.3 2.3 97 97 A E 0 0 179 -74,-4.2 -73,-0.3 -2,-0.5 -1,-0.1 0.921 360.0 360.0 -85.6 360.0 -5.2 -16.1 4.1