==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN/INHIBITOR 06-SEP-99 1CZQ . COMPND 2 MOLECULE: FUSION PROTEIN BETWEEN THE HYDROPHOBIC POCKET OF . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE, HUMAN . AUTHOR D.M.ECKERT,V.N.MALASHKEVICH,L.H.HONG,P.A.CARR,P.S.KIM . 61 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5977.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 85.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 8.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 46 75.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A R > 0 0 259 0, 0.0 4,-0.8 0, 0.0 3,-0.3 0.000 360.0 360.0 360.0 -47.7 27.8 10.2 -20.2 2 2 A M H > + 0 0 140 1,-0.2 4,-1.4 2,-0.2 3,-0.2 0.781 360.0 69.7 -74.0 -24.7 24.4 9.7 -18.5 3 3 A K H >> S+ 0 0 126 1,-0.3 4,-1.5 2,-0.2 3,-0.6 0.908 97.0 53.3 -57.3 -39.9 25.4 6.1 -17.7 4 4 A Q H 3> S+ 0 0 104 -3,-0.3 4,-2.7 1,-0.2 5,-0.3 0.874 101.6 60.4 -60.1 -37.2 27.8 7.6 -15.2 5 5 A I H 3X S+ 0 0 76 -4,-0.8 4,-1.4 1,-0.2 -1,-0.2 0.831 101.9 52.3 -59.9 -33.6 24.8 9.5 -13.9 6 6 A E H 0 0 47 0, 0.0 4,-1.9 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 179.8 14.0 -0.4 29.4 48 2 D X H > - 0 0 2 1,-0.2 4,-0.5 2,-0.2 5,-0.5 0.844 360.0 -40.0 61.0 38.9 17.6 -0.8 30.3 49 3 D X H >4 S- 0 0 39 2,-0.2 3,-0.7 3,-0.1 -1,-0.2 0.942 112.1 -52.4 81.0 47.5 18.1 -3.9 28.2 50 4 D X H 34 S- 0 0 150 1,-0.2 -2,-0.2 2,-0.1 -1,-0.1 0.902 109.2 -49.2 55.6 47.7 14.8 -5.7 28.8 51 5 D X H 3< S+ 0 0 51 -4,-1.9 -1,-0.2 1,-0.1 -2,-0.2 0.737 92.3 149.5 67.3 23.9 15.1 -5.6 32.6 52 6 D X << - 0 0 161 -3,-0.7 2,-0.6 -4,-0.5 -3,-0.1 0.792 30.7-166.3 -58.9 -30.1 18.7 -6.9 32.5 53 7 D X > + 0 0 106 -5,-0.5 3,-2.3 1,-0.1 4,-0.3 -0.693 35.4 139.7 80.2-124.8 19.7 -5.0 35.6 54 8 D X G > S- 0 0 223 -2,-0.6 3,-1.5 1,-0.3 4,-0.4 0.770 96.8 -65.2 54.3 35.7 23.5 -5.1 35.8 55 9 D X G 3 S- 0 0 126 1,-0.3 -1,-0.3 2,-0.1 3,-0.1 0.627 109.4 -40.7 68.1 12.4 23.9 -1.6 37.0 56 10 D X G X> S- 0 0 38 -3,-2.3 4,-2.2 -8,-0.2 3,-0.8 0.325 83.0-102.2 111.8 -6.4 22.5 -0.4 33.6 57 11 D X H <> S- 0 0 51 -3,-1.5 4,-2.7 -4,-0.3 5,-0.2 0.869 76.8 -59.3 58.7 34.1 24.3 -2.9 31.4 58 12 D X H 3> S- 0 0 163 -4,-0.4 4,-1.0 1,-0.2 -1,-0.3 0.856 108.2 -45.1 62.0 38.0 26.8 -0.3 30.3 59 13 D X H <4 S- 0 0 8 -3,-0.8 3,-0.4 2,-0.2 -1,-0.2 0.919 111.0 -51.1 75.0 41.6 23.9 1.9 28.9 60 14 D X H < S- 0 0 25 -4,-2.2 -2,-0.2 1,-0.2 -1,-0.2 0.921 110.8 -51.4 58.7 41.6 22.2 -1.0 27.2 61 15 D X H < 0 0 88 -4,-2.7 -1,-0.2 1,-0.2 -2,-0.2 0.760 360.0 360.0 65.8 27.4 25.6 -1.9 25.6 62 16 D X < 0 0 77 -4,-1.0 -1,-0.2 -3,-0.4 -2,-0.2 0.778 360.0 360.0 75.3 360.0 26.0 1.7 24.4