==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER NEUROPEPTIDE 15-SEP-99 1D1E . COMPND 2 MOLECULE: C-TERMINAL ANALOGUE OF NEUROPEPTIDE Y, A POTENT . SOURCE 2 SYNTHETIC: YES; . AUTHOR S.YAO,R.S.NORTON . 12 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2003.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 8 66.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 25.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 33.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 25 A R 0 0 272 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 41.9 9.1 8.8 -6.9 2 26 A H - 0 0 169 1,-0.1 2,-0.5 2,-0.0 3,-0.0 -0.003 360.0 -90.0 70.8 178.5 7.7 6.9 -3.9 3 27 A Y > - 0 0 181 1,-0.1 3,-0.7 0, 0.0 -1,-0.1 -0.993 25.3-162.3-124.6 118.2 9.9 5.5 -1.2 4 28 A K T >> + 0 0 122 -2,-0.5 3,-2.8 1,-0.2 4,-2.6 0.511 65.3 110.1 -80.1 -2.3 11.1 1.9 -1.9 5 29 A N H 3>> + 0 0 97 1,-0.3 4,-2.9 2,-0.2 5,-0.5 0.830 60.2 75.0 -32.7 -51.6 11.9 1.8 1.9 6 30 A L H <>5S+ 0 0 136 -3,-0.7 4,-0.6 1,-0.2 -1,-0.3 0.771 116.3 17.2 -32.7 -45.3 9.0 -0.6 2.2 7 31 A I H <>5S+ 0 0 102 -3,-2.8 4,-2.5 2,-0.2 -1,-0.2 0.799 114.5 73.2 -99.3 -43.0 11.1 -3.3 0.6 8 32 A E H <5S+ 0 0 100 -4,-2.6 -2,-0.2 1,-0.2 -3,-0.2 0.753 111.9 32.0 -42.6 -32.3 14.5 -1.7 1.1 9 33 A R H ><5S+ 0 0 204 -4,-2.9 3,-2.2 -5,-0.3 -1,-0.2 0.804 110.5 60.7 -98.3 -40.2 14.0 -2.6 4.8 10 34 A Q H 3<