==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 30-MAR-07 2EQG . COMPND 2 MOLECULE: TUMOR NECROSIS FACTOR, ALPHA-INDUCED PROTEIN 3; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.P.ZHANG,F.HAYAHSI,S.YOKOYAMA,RIKEN STRUCTURAL . 49 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4350.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 20 40.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 4.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 10.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 16.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 123 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 46.3 -12.3 1.2 21.2 2 2 A S + 0 0 136 1,-0.2 2,-0.3 0, 0.0 0, 0.0 0.906 360.0 127.7 64.9 42.7 -11.0 3.9 18.8 3 3 A S + 0 0 118 2,-0.0 -1,-0.2 0, 0.0 2,-0.1 -0.958 26.2 65.4-131.7 149.3 -10.0 1.3 16.2 4 4 A G - 0 0 78 -2,-0.3 2,-0.3 -3,-0.1 4,-0.1 0.040 46.3-153.9 114.6 137.0 -10.8 0.9 12.5 5 5 A S - 0 0 83 2,-0.7 21,-0.0 -2,-0.1 -2,-0.0 -0.893 42.8 -83.9-137.7 167.0 -10.1 2.9 9.3 6 6 A S S S+ 0 0 105 -2,-0.3 2,-0.2 20,-0.1 -1,-0.0 0.850 116.4 54.5 -35.6 -49.3 -11.5 3.4 5.9 7 7 A G S S- 0 0 5 18,-0.1 -2,-0.7 19,-0.1 2,-0.5 -0.623 74.9-151.9 -92.6 151.5 -9.7 0.2 4.8 8 8 A S - 0 0 66 -2,-0.2 2,-0.2 -4,-0.1 19,-0.1 -0.974 25.1-114.7-127.5 120.1 -10.1 -3.2 6.5 9 9 A L - 0 0 123 -2,-0.5 15,-0.2 15,-0.2 2,-0.1 -0.300 40.5-159.1 -52.9 111.9 -7.3 -5.8 6.5 10 10 A M - 0 0 97 13,-1.2 13,-0.1 -2,-0.2 -1,-0.1 -0.259 34.1 -97.1 -87.5 178.3 -8.8 -8.7 4.4 11 11 A D S S+ 0 0 142 11,-0.1 2,-0.4 -2,-0.1 -1,-0.1 0.298 95.3 104.1 -79.1 11.2 -7.8 -12.3 4.4 12 12 A V S S- 0 0 71 11,-0.3 11,-1.8 1,-0.0 -2,-0.2 -0.817 73.4-124.7 -99.2 132.2 -5.7 -11.5 1.3 13 13 A K B -A 22 0A 138 -2,-0.4 9,-0.3 9,-0.3 8,-0.1 -0.383 41.9 -82.9 -72.2 150.1 -1.9 -11.2 1.6 14 14 A C - 0 0 5 7,-2.6 16,-0.2 5,-0.3 5,-0.2 -0.173 42.7-110.7 -52.2 142.0 -0.2 -8.0 0.4 15 15 A E S S+ 0 0 104 14,-2.0 15,-0.1 -3,-0.1 -1,-0.1 0.902 100.3 83.0 -38.6 -61.3 0.4 -7.9 -3.4 16 16 A T S > S- 0 0 31 1,-0.2 3,-1.0 2,-0.1 -2,-0.1 -0.245 77.3-143.7 -52.0 124.1 4.2 -8.2 -2.8 17 17 A P T 3 S+ 0 0 116 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 0.481 101.3 53.0 -69.8 -1.2 5.0 -11.9 -2.4 18 18 A N T 3 S+ 0 0 139 1,-0.0 -2,-0.1 3,-0.0 -3,-0.1 0.585 86.0 92.2-107.1 -17.9 7.7 -10.7 0.1 19 19 A C < - 0 0 17 -3,-1.0 -5,-0.3 -5,-0.2 -1,-0.0 -0.707 56.1-165.7 -84.8 110.3 5.4 -8.6 2.3 20 20 A P + 0 0 106 0, 0.0 2,-0.2 0, 0.0 -1,-0.2 0.578 64.2 95.3 -69.8 -9.0 4.0 -10.8 5.2 21 21 A F S S- 0 0 104 -8,-0.1 -7,-2.6 1,-0.1 2,-0.2 -0.493 77.8-117.7 -84.0 154.4 1.4 -8.1 5.8 22 22 A F B -A 13 0A 88 -9,-0.3 10,-0.5 -2,-0.2 2,-0.5 -0.518 24.8-111.5 -89.8 159.0 -2.1 -8.2 4.3 23 23 A M - 0 0 28 -11,-1.8 -13,-1.2 8,-0.2 -11,-0.3 -0.794 29.7-139.3 -94.6 127.5 -3.6 -5.7 1.9 24 24 A S > - 0 0 7 -2,-0.5 4,-1.8 6,-0.3 -15,-0.2 -0.124 25.8-106.1 -74.7 176.3 -6.4 -3.5 3.2 25 25 A V T 4 S+ 0 0 63 1,-0.2 -1,-0.1 2,-0.2 -18,-0.1 0.698 124.0 36.5 -77.0 -19.9 -9.5 -2.5 1.3 26 26 A N T 4 S+ 0 0 113 1,-0.0 -1,-0.2 3,-0.0 4,-0.1 0.406 121.8 45.6-109.7 -2.9 -8.1 1.0 0.8 27 27 A T T >4 S+ 0 0 16 3,-0.1 3,-1.0 2,-0.1 -2,-0.2 0.604 92.8 156.7-111.5 -21.7 -4.5 -0.1 0.4 28 28 A Q T 3< + 0 0 117 -4,-1.8 3,-0.1 1,-0.4 -14,-0.1 -0.087 58.6 26.2 -52.0 151.5 -5.0 -3.0 -2.0 29 29 A P T 3 S+ 0 0 77 0, 0.0 -14,-2.0 0, 0.0 -1,-0.4 -0.955 135.2 39.9 -69.8 -17.3 -3.5 -4.4 -3.9 30 30 A L S < S- 0 0 20 -3,-1.0 -6,-0.3 -16,-0.2 2,-0.1 -0.274 86.1-117.5 -81.0 170.7 -0.8 -3.1 -1.7 31 31 A C > - 0 0 2 -8,-0.2 4,-3.1 -3,-0.1 5,-0.3 -0.431 34.7 -90.8-101.9 178.6 -0.9 -3.0 2.1 32 32 A H H > S+ 0 0 117 -10,-0.5 4,-1.6 2,-0.2 5,-0.3 0.878 126.2 48.7 -56.3 -39.8 -0.7 -0.1 4.6 33 33 A E H > S+ 0 0 81 2,-0.2 4,-2.3 3,-0.1 -1,-0.2 0.995 120.2 32.3 -64.1 -65.9 3.1 -0.5 4.7 34 34 A C H > S+ 0 0 18 2,-0.2 4,-3.0 1,-0.2 5,-0.3 0.952 113.7 62.7 -56.9 -53.7 3.8 -0.6 1.0 35 35 A S H >X S+ 0 0 45 -4,-3.1 4,-2.0 1,-0.3 3,-0.6 0.894 112.5 34.4 -35.8 -68.1 1.0 1.7 0.1 36 36 A E H 3X S+ 0 0 118 -4,-1.6 4,-1.4 -5,-0.3 -1,-0.3 0.901 113.6 61.1 -57.5 -43.1 2.5 4.6 2.0 37 37 A R H 3< S+ 0 0 159 -4,-2.3 4,-0.5 -5,-0.3 -1,-0.2 0.868 107.4 45.5 -52.3 -39.4 6.0 3.5 1.1 38 38 A R H XX S+ 0 0 140 -4,-3.0 3,-2.0 -3,-0.6 4,-0.6 0.909 99.0 69.0 -71.6 -43.6 5.1 4.0 -2.5 39 39 A Q H >< S+ 0 0 128 -4,-2.0 3,-1.3 -5,-0.3 -1,-0.2 0.871 88.7 66.2 -41.1 -47.5 3.5 7.4 -2.0 40 40 A K T 3< S+ 0 0 142 -4,-1.4 -1,-0.3 1,-0.3 -2,-0.2 0.872 87.4 69.5 -43.4 -45.1 6.9 8.8 -1.2 41 41 A N T <4 S+ 0 0 96 -3,-2.0 2,-0.5 -4,-0.5 -1,-0.3 0.891 102.5 46.2 -40.4 -53.4 7.8 8.1 -4.9 42 42 A Q S << S+ 0 0 143 -3,-1.3 2,-0.3 -4,-0.6 -1,-0.1 -0.843 73.8 169.5 -99.9 126.4 5.5 10.8 -6.0 43 43 A N - 0 0 127 -2,-0.5 -3,-0.0 1,-0.0 -2,-0.0 -0.995 31.9-158.3-137.9 142.6 5.6 14.2 -4.1 44 44 A S - 0 0 115 1,-0.4 -1,-0.0 -2,-0.3 -2,-0.0 0.178 47.7-126.4-101.8 15.1 4.1 17.6 -4.8 45 45 A G - 0 0 49 3,-0.0 -1,-0.4 2,-0.0 2,-0.2 -0.298 63.1 -3.5 74.3-160.3 6.7 19.4 -2.6 46 46 A P - 0 0 94 0, 0.0 3,-0.2 0, 0.0 -3,-0.0 -0.455 64.5-128.1 -69.7 134.3 5.8 21.7 0.2 47 47 A S S S+ 0 0 128 1,-0.2 -2,-0.0 -2,-0.2 0, 0.0 0.896 109.9 55.6 -46.5 -47.9 2.1 22.4 0.7 48 48 A S 0 0 126 1,-0.3 -1,-0.2 -3,-0.0 -3,-0.0 0.937 360.0 360.0 -52.2 -52.8 2.8 26.1 0.7 49 49 A G 0 0 86 -3,-0.2 -1,-0.3 0, 0.0 -2,-0.1 -0.373 360.0 360.0 -85.8 360.0 4.5 25.9 -2.7