==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=27-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN/RNA 28-AUG-96 1ETG . COMPND 2 MOLECULE: REV RESPONSIVE ELEMENT RNA; . SOURCE 2 SYNTHETIC: YES; . AUTHOR J.L.BATTISTE,H.MAO,N.S.RAO,R.TAN,D.R.MUHANDIRAM,L.E.KAY, . 23 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2746.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 18 78.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 78.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 33 B D 0 0 142 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 144.3 6.8 1.7 8.5 2 34 B T > - 0 0 83 1,-0.1 4,-2.3 4,-0.0 5,-0.3 -0.305 360.0 -97.9 -87.4 174.2 6.7 3.1 5.0 3 35 B R H > S+ 0 0 184 2,-0.2 4,-2.6 1,-0.2 5,-0.1 0.865 125.8 45.9 -59.8 -37.9 3.5 3.9 3.0 4 36 B Q H > S+ 0 0 101 2,-0.2 4,-4.8 3,-0.2 5,-0.3 0.971 109.3 51.8 -71.1 -55.7 3.8 0.6 1.2 5 37 B A H > S+ 0 0 31 1,-0.2 4,-2.9 2,-0.2 -2,-0.2 0.878 118.2 39.4 -47.5 -46.7 4.5 -1.5 4.3 6 38 B R H X S+ 0 0 117 -4,-2.3 4,-3.9 2,-0.2 -1,-0.2 0.943 116.6 49.9 -70.0 -48.4 1.4 0.0 6.0 7 39 B R H X S+ 0 0 135 -4,-2.6 4,-2.2 -5,-0.3 -2,-0.2 0.913 116.7 42.7 -55.4 -45.5 -0.6 -0.0 2.7 8 40 B N H X S+ 0 0 67 -4,-4.8 4,-0.8 2,-0.2 -2,-0.2 0.953 118.0 44.5 -65.5 -50.9 0.3 -3.7 2.3 9 41 B R H X S+ 0 0 172 -4,-2.9 4,-1.5 -5,-0.3 3,-0.4 0.847 112.9 54.3 -61.0 -35.6 -0.3 -4.5 6.0 10 42 B R H X S+ 0 0 119 -4,-3.9 4,-4.6 1,-0.2 -1,-0.2 0.926 99.4 58.0 -67.3 -46.2 -3.5 -2.5 5.8 11 43 B R H X S+ 0 0 92 -4,-2.2 4,-3.1 2,-0.2 5,-0.3 0.745 103.4 56.6 -60.4 -21.9 -5.0 -4.4 2.9 12 44 B R H X S+ 0 0 165 -4,-0.8 4,-2.7 -3,-0.4 -1,-0.2 0.977 115.4 34.4 -71.0 -55.6 -4.6 -7.6 5.0 13 45 B W H X S+ 0 0 145 -4,-1.5 4,-2.8 2,-0.2 5,-0.3 0.897 120.8 55.7 -57.7 -41.2 -6.7 -6.1 7.8 14 46 B R H X S+ 0 0 171 -4,-4.6 4,-1.6 2,-0.2 -2,-0.2 0.982 115.4 31.7 -55.7 -69.8 -8.7 -4.3 5.1 15 47 B E H X S+ 0 0 108 -4,-3.1 4,-2.9 2,-0.2 -1,-0.2 0.854 117.5 58.6 -60.4 -37.5 -9.7 -7.4 3.0 16 48 B R H X S+ 0 0 158 -4,-2.7 4,-2.5 -5,-0.3 -1,-0.2 0.965 109.0 42.0 -61.2 -53.3 -9.8 -9.6 6.1 17 49 B Q H X S+ 0 0 104 -4,-2.8 4,-3.1 1,-0.2 -1,-0.3 0.827 112.3 61.3 -58.5 -27.4 -12.4 -7.4 7.8 18 50 B R H X S+ 0 0 150 -4,-1.6 4,-3.6 -5,-0.3 -2,-0.3 0.955 104.5 44.3 -58.2 -55.1 -13.8 -7.5 4.2 19 51 B A H X S+ 0 0 36 -4,-2.9 4,-4.3 2,-0.2 -2,-0.2 0.946 116.0 46.8 -58.1 -51.8 -14.2 -11.3 4.4 20 52 B A H < S+ 0 0 60 -4,-2.5 -2,-0.2 2,-0.2 -1,-0.2 0.946 115.7 45.5 -56.0 -52.3 -15.8 -11.1 7.9 21 53 B A H < S+ 0 0 82 -4,-3.1 -2,-0.2 -5,-0.2 -1,-0.2 0.954 117.7 43.8 -55.7 -54.0 -18.1 -8.2 6.8 22 54 B A H < 0 0 66 -4,-3.6 -2,-0.2 -5,-0.2 -1,-0.2 0.960 360.0 360.0 -55.8 -55.4 -19.0 -10.0 3.6 23 55 B R < 0 0 258 -4,-4.3 0, 0.0 -5,-0.2 0, 0.0 -0.039 360.0 360.0 -68.7 360.0 -19.4 -13.4 5.4