==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL ADHESION, STRUCTURAL PROTEIN 23-MAY-06 2H41 . COMPND 2 MOLECULE: FIBRONECTIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR I.VAKONAKIS,I.D.CAMPBELL . 95 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5768.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 61.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 34 35.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 11.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 10.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 97 0, 0.0 4,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-167.9 22.4 11.2 -15.9 2 2 A P > - 0 0 104 0, 0.0 3,-6.3 0, 0.0 4,-0.3 0.190 360.0-145.4 -75.2 20.0 19.7 8.5 -15.6 3 3 A L G > - 0 0 107 1,-0.4 3,-1.8 2,-0.2 5,-0.1 0.756 66.4 -79.3 21.4 19.2 22.1 6.3 -13.8 4 4 A G G 3 S- 0 0 64 1,-0.3 -1,-0.4 2,-0.1 3,-0.2 0.710 92.5 -45.5 65.7 18.6 19.8 4.2 -15.9 5 5 A S G < - 0 0 63 -3,-6.3 -1,-0.3 1,-0.1 4,-0.3 -0.193 69.2-138.8 116.3 -37.2 17.4 4.7 -13.1 6 6 A H < - 0 0 47 -3,-1.8 -1,-0.1 1,-0.3 -2,-0.1 0.713 29.3-118.6 56.9 15.7 19.9 4.0 -10.3 7 7 A L > - 0 0 124 1,-0.3 3,-0.7 -3,-0.2 2,-0.4 0.714 53.0-177.0 29.8 -3.2 17.1 2.2 -8.8 8 8 A V T 3 + 0 0 104 1,-0.3 -1,-0.3 -5,-0.1 3,-0.2 0.412 60.2 86.7 12.3 -49.3 18.5 5.1 -6.9 9 9 A A T 3 + 0 0 57 -2,-0.4 2,-0.8 -4,-0.3 -1,-0.3 0.819 64.1 165.7 -26.4 -80.4 15.9 4.0 -4.3 10 10 A T X + 0 0 119 -3,-0.7 3,-0.7 1,-0.0 -1,-0.2 -0.845 37.6 83.9 102.5-108.1 18.3 1.5 -2.8 11 11 A S T 3 S- 0 0 68 -2,-0.8 4,-0.1 1,-0.3 -1,-0.0 -0.056 115.4 -71.8 -37.9 114.0 17.2 0.2 0.6 12 12 A E T 3 - 0 0 123 1,-0.3 -1,-0.3 2,-0.1 -3,-0.0 0.394 46.6-133.6 -9.3 73.0 14.8 -2.6 -0.1 13 13 A S S < S+ 0 0 92 -3,-0.7 2,-0.6 1,-0.2 -1,-0.3 0.709 103.9 74.3 -18.9 -7.5 12.2 -0.1 -1.4 14 14 A V + 0 0 49 1,-0.1 -1,-0.2 8,-0.1 -2,-0.1 -0.889 57.7 146.1-117.8 96.7 10.6 -2.6 1.0 15 15 A T + 0 0 76 -2,-0.6 2,-2.3 1,-0.2 3,-0.2 0.889 50.3 78.2 -93.4 -76.6 11.6 -1.9 4.6 16 16 A E + 0 0 72 1,-0.2 -1,-0.2 4,-0.1 47,-0.1 0.052 54.4 145.8 -35.8 69.2 8.8 -2.8 6.9 17 17 A I > + 0 0 85 -2,-2.3 3,-3.2 3,-0.2 -1,-0.2 0.729 27.8 116.0 -86.0 -23.2 9.8 -6.5 6.5 18 18 A T G > S+ 0 0 104 1,-0.3 3,-3.2 2,-0.3 48,-0.3 -0.121 93.4 4.0 -45.8 137.8 8.8 -7.2 10.1 19 19 A A G 3 S- 0 0 55 1,-0.3 47,-0.7 46,-0.1 -1,-0.3 0.723 131.4 -72.7 54.1 16.8 5.9 -9.7 10.2 20 20 A S G < S- 0 0 9 -3,-3.2 -1,-0.3 45,-0.1 -2,-0.3 0.804 83.5-178.8 67.7 28.3 6.5 -9.6 6.4 21 21 A S < - 0 0 3 -3,-3.2 2,-0.4 -4,-0.1 -1,-0.1 0.024 15.3-138.0 -53.9 167.6 5.0 -6.1 6.4 22 22 A F E -A 63 0A 9 41,-1.3 41,-2.8 73,-0.1 2,-0.6 -0.984 9.0-155.6-133.5 145.5 4.6 -4.1 3.2 23 23 A V E +A 62 0A 53 -2,-0.4 2,-0.4 39,-0.2 39,-0.2 -0.895 22.5 172.5-124.3 101.7 5.2 -0.5 2.3 24 24 A V E -A 61 0A 9 37,-2.1 37,-2.5 -2,-0.6 2,-0.3 -0.897 7.6-173.3-112.9 139.7 3.2 0.6 -0.7 25 25 A S E +A 60 0A 78 -2,-0.4 35,-0.3 35,-0.2 2,-0.2 -0.928 7.9 166.7-128.7 152.5 2.9 4.2 -2.0 26 26 A W - 0 0 19 33,-2.4 2,-0.5 -2,-0.3 63,-0.1 -0.715 35.6 -88.9-144.8-165.0 0.8 5.7 -4.7 27 27 A V - 0 0 111 -2,-0.2 2,-5.8 61,-0.1 32,-0.1 -0.976 32.1-119.5-123.9 127.2 -0.4 9.0 -6.2 28 28 A S - 0 0 32 -2,-0.5 2,-9.9 1,-0.2 5,-0.2 -0.139 31.4-166.3 -57.9 58.2 -3.6 10.9 -5.0 29 29 A A S S+ 0 0 63 -2,-5.8 -1,-0.2 2,-0.1 2,-0.2 0.324 73.7 37.8 -38.1 24.5 -4.8 10.5 -8.6 30 30 A S > - 0 0 39 -2,-9.9 3,-0.6 26,-0.1 -1,-0.1 -0.732 60.3-157.0 179.2 128.8 -7.3 13.1 -7.3 31 31 A D T 3 S+ 0 0 152 1,-0.2 -2,-0.1 -2,-0.2 -1,-0.1 0.561 95.8 68.7 -86.5 -9.6 -7.3 16.1 -5.1 32 32 A T T 3 S+ 0 0 77 -4,-0.1 49,-0.9 2,-0.0 -1,-0.2 0.436 73.3 121.9 -87.1 0.2 -11.0 15.7 -4.5 33 33 A V E < -B 80 0B 6 -3,-0.6 47,-0.3 47,-0.2 3,-0.1 -0.393 48.5-163.8 -65.2 137.2 -10.3 12.5 -2.6 34 34 A S E - 0 0 64 45,-5.5 22,-0.9 1,-0.3 2,-0.3 0.606 69.6 -29.1 -96.3 -15.4 -11.6 12.6 1.0 35 35 A G E -BC 79 55B 8 44,-1.2 44,-3.5 20,-0.3 -1,-0.3 -0.964 63.8-104.6 178.6 175.6 -9.5 9.7 2.1 36 36 A F E -BC 78 54B 0 18,-4.2 18,-3.3 -2,-0.3 2,-0.4 -0.908 18.1-157.4-123.4 151.5 -7.8 6.5 0.9 37 37 A R E -BC 77 53B 60 40,-3.2 40,-2.9 -2,-0.3 2,-0.4 -0.978 6.1-162.5-132.3 121.2 -8.7 2.8 1.3 38 38 A V E -BC 76 52B 0 14,-3.0 14,-2.2 -2,-0.4 2,-0.4 -0.853 5.3-170.4-105.2 136.6 -6.2 0.0 1.0 39 39 A E E +BC 75 51B 25 36,-1.9 36,-2.2 -2,-0.4 2,-0.4 -0.989 7.3 173.5-129.3 129.8 -7.3 -3.6 0.5 40 40 A Y E +BC 74 50B 16 10,-1.4 10,-1.6 -2,-0.4 2,-0.3 -0.998 3.6 163.0-138.7 135.3 -5.0 -6.6 0.7 41 41 A E E -B 73 0B 53 32,-1.3 32,-3.0 -2,-0.4 2,-0.4 -0.956 46.6 -83.2-145.3 161.4 -5.8 -10.3 0.6 42 42 A L E > -B 72 0B 4 -2,-0.3 4,-0.8 30,-0.2 30,-0.3 -0.526 27.0-151.9 -71.1 124.8 -4.0 -13.6 0.0 43 43 A S T 4 S+ 0 0 47 28,-3.0 -1,-0.2 -2,-0.4 29,-0.2 0.557 95.1 33.2 -71.7 -7.7 -3.6 -14.3 -3.7 44 44 A E T 4 S+ 0 0 117 27,-0.6 -1,-0.1 0, 0.0 28,-0.1 0.774 124.7 32.6-109.9 -69.7 -3.6 -18.0 -2.8 45 45 A E T 4 S- 0 0 108 1,-0.1 -2,-0.1 3,-0.0 25,-0.0 0.849 86.9-145.2 -60.7 -35.4 -5.8 -18.8 0.2 46 46 A G < + 0 0 41 -4,-0.8 -1,-0.1 2,-0.1 -3,-0.1 0.556 33.2 175.2 79.2 7.3 -8.2 -16.1 -0.7 47 47 A D - 0 0 53 1,-0.1 -6,-0.0 -6,-0.0 0, 0.0 0.394 45.8 -56.9 -28.0-171.7 -8.7 -15.4 3.0 48 48 A E - 0 0 126 1,-0.1 -1,-0.1 -7,-0.1 -6,-0.1 -0.601 60.9-112.8 -82.3 139.1 -11.0 -12.5 3.9 49 49 A P - 0 0 47 0, 0.0 2,-0.4 0, 0.0 -8,-0.2 -0.391 26.1-147.2 -70.9 145.8 -9.9 -9.1 2.6 50 50 A Q E -C 40 0B 63 -10,-1.6 -10,-1.4 -2,-0.1 2,-0.4 -0.888 7.3-152.9-115.9 145.7 -8.8 -6.4 5.0 51 51 A Y E -C 39 0B 102 -2,-0.4 2,-0.4 -12,-0.2 -12,-0.2 -0.952 7.0-168.4-123.3 141.3 -9.3 -2.6 4.6 52 52 A L E -C 38 0B 50 -14,-2.2 -14,-3.0 -2,-0.4 2,-0.5 -0.991 12.2-148.4-128.1 127.7 -7.3 0.3 5.8 53 53 A D E +C 37 0B 119 -2,-0.4 -16,-0.2 -16,-0.2 -2,-0.0 -0.838 18.9 176.1-101.7 131.2 -8.5 3.9 5.7 54 54 A L E -C 36 0B 33 -18,-3.3 -18,-4.2 -2,-0.5 7,-0.0 -0.895 33.6 -95.2-128.0 157.6 -6.1 6.8 5.3 55 55 A P E > -C 35 0B 73 0, 0.0 3,-2.9 0, 0.0 -20,-0.3 -0.262 37.8-106.3 -69.8 158.0 -6.7 10.6 4.9 56 56 A S T 3 S+ 0 0 44 -22,-0.9 -21,-0.2 1,-0.3 -23,-0.1 0.638 123.6 59.8 -59.2 -12.2 -6.8 12.3 1.5 57 57 A T T 3 S+ 0 0 118 -23,-0.2 2,-0.3 -21,-0.1 -1,-0.3 0.539 84.9 97.9 -92.9 -8.7 -3.4 13.6 2.5 58 58 A A < + 0 0 17 -3,-2.9 3,-0.1 1,-0.1 -4,-0.1 -0.640 37.3 165.7 -83.2 135.4 -2.0 10.0 2.8 59 59 A T + 0 0 61 -2,-0.3 -33,-2.4 1,-0.2 2,-0.3 0.142 64.9 35.3-133.2 16.8 -0.1 8.7 -0.2 60 60 A S E -A 25 0A 67 -35,-0.3 2,-0.3 2,-0.0 -35,-0.2 -0.948 58.9-176.6-167.6 147.2 1.6 5.7 1.3 61 61 A V E -A 24 0A 23 -37,-2.5 -37,-2.1 -2,-0.3 2,-0.5 -0.998 21.7-131.4-152.2 150.5 0.9 3.0 4.0 62 62 A N E -A 23 0A 52 -2,-0.3 -39,-0.2 -39,-0.2 -41,-0.1 -0.900 16.5-151.8-106.3 125.0 2.5 0.1 5.7 63 63 A I E -A 22 0A 0 -41,-2.8 -41,-1.3 -2,-0.5 3,-0.2 -0.827 21.8-178.3 -99.5 104.9 0.6 -3.2 5.9 64 64 A P + 0 0 58 0, 0.0 -45,-0.1 0, 0.0 -44,-0.0 -0.261 54.6 53.2 -91.0-179.5 1.7 -5.2 9.0 65 65 A D S S+ 0 0 135 1,-0.2 2,-0.2 -47,-0.1 -46,-0.1 0.819 74.6 160.6 61.7 32.7 0.6 -8.6 10.3 66 66 A L - 0 0 8 -47,-0.7 -1,-0.2 -48,-0.3 -45,-0.1 -0.584 44.1-116.4 -86.4 148.5 1.4 -10.2 6.9 67 67 A L > - 0 0 80 -2,-0.2 3,-0.9 -47,-0.1 28,-0.3 -0.751 30.8-126.6 -88.2 114.8 2.0 -13.9 6.6 68 68 A P T 3 S+ 0 0 92 0, 0.0 3,-0.1 0, 0.0 -48,-0.0 -0.265 92.5 25.9 -59.0 140.6 5.6 -14.7 5.4 69 69 A G T 3 S+ 0 0 60 26,-0.5 2,-0.3 1,-0.3 25,-0.0 0.718 102.3 113.1 77.0 21.3 5.9 -16.9 2.3 70 70 A R < - 0 0 51 -3,-0.9 25,-2.0 -26,-0.0 2,-0.5 -0.937 63.9-129.0-126.9 150.2 2.5 -15.7 1.1 71 71 A K E - D 0 94B 72 -2,-0.3 -28,-3.0 23,-0.2 -27,-0.6 -0.833 25.5-168.8-100.2 131.6 1.4 -13.7 -1.8 72 72 A Y E -BD 42 93B 6 21,-2.6 21,-2.3 -2,-0.5 2,-0.5 -0.916 16.5-138.0-120.5 148.3 -0.9 -10.8 -1.2 73 73 A I E -BD 41 92B 53 -32,-3.0 -32,-1.3 -2,-0.4 2,-0.5 -0.896 20.7-163.3-105.3 125.4 -2.9 -8.6 -3.6 74 74 A V E +BD 40 91B 1 17,-2.9 17,-2.9 -2,-0.5 2,-0.4 -0.929 11.3 176.0-114.5 132.5 -3.0 -4.9 -2.9 75 75 A N E -BD 39 90B 21 -36,-2.2 -36,-1.9 -2,-0.5 2,-0.5 -0.983 14.6-154.5-136.5 122.5 -5.4 -2.4 -4.3 76 76 A V E -BD 38 89B 1 13,-3.5 12,-2.6 -2,-0.4 13,-1.2 -0.855 12.4-172.3-101.0 125.4 -5.5 1.3 -3.4 77 77 A Y E -BD 37 87B 46 -40,-2.9 -40,-3.2 -2,-0.5 2,-0.4 -0.938 14.2-142.8-117.2 137.9 -8.8 3.1 -3.8 78 78 A Q E -BD 36 86B 16 8,-1.9 8,-1.1 -2,-0.4 2,-0.6 -0.826 14.0-140.1-100.7 135.0 -9.3 6.8 -3.4 79 79 A I E -BD 35 85B 40 -44,-3.5 -45,-5.5 -2,-0.4 -44,-1.2 -0.838 15.2-150.7 -99.1 122.9 -12.5 8.1 -1.8 80 80 A S E > -B 33 0B 25 4,-2.4 3,-2.6 -2,-0.6 -47,-0.2 -0.319 36.0 -96.0 -83.7 169.7 -14.1 11.1 -3.2 81 81 A E T 3 S+ 0 0 158 -49,-0.9 -1,-0.1 1,-0.3 -48,-0.1 0.662 128.5 55.7 -59.8 -14.5 -16.3 13.7 -1.4 82 82 A D T 3 S- 0 0 111 2,-0.1 -1,-0.3 0, 0.0 3,-0.1 0.479 122.0-107.5 -96.1 -4.3 -19.2 11.7 -2.7 83 83 A G S < S+ 0 0 50 -3,-2.6 2,-0.3 1,-0.3 -2,-0.1 0.610 70.4 147.9 87.8 13.8 -17.9 8.4 -1.2 84 84 A E - 0 0 118 2,-0.0 -4,-2.4 1,-0.0 2,-0.4 -0.635 37.1-145.0 -84.6 139.1 -17.0 7.0 -4.6 85 85 A Q E -D 79 0B 78 -2,-0.3 2,-0.4 -6,-0.2 -6,-0.2 -0.847 14.7-173.7-106.8 141.0 -14.0 4.7 -4.8 86 86 A S E -D 78 0B 62 -8,-1.1 -8,-1.9 -2,-0.4 2,-0.5 -0.990 27.8-121.1-136.7 127.1 -11.6 4.6 -7.7 87 87 A L E +D 77 0B 90 -2,-0.4 -10,-0.2 -10,-0.2 3,-0.1 -0.512 38.9 161.8 -68.2 117.3 -8.7 2.1 -8.2 88 88 A I E + 0 0 39 -12,-2.6 2,-0.3 -2,-0.5 -1,-0.2 0.622 67.4 18.0-109.0 -21.8 -5.5 4.2 -8.5 89 89 A L E +D 76 0B 56 -13,-1.2 -13,-3.5 -63,-0.1 2,-0.4 -0.909 57.3 176.4-156.9 125.7 -3.0 1.4 -7.9 90 90 A S E +D 75 0B 67 -2,-0.3 2,-0.3 -15,-0.2 -15,-0.2 -0.982 20.2 144.3-132.7 120.2 -3.2 -2.4 -8.0 91 91 A T E -D 74 0B 59 -17,-2.9 -17,-2.9 -2,-0.4 2,-0.3 -0.995 32.8-137.8-154.6 151.7 -0.2 -4.6 -7.4 92 92 A S E -D 73 0B 51 -2,-0.3 2,-0.3 -19,-0.2 -19,-0.2 -0.750 17.8-170.6-110.5 158.6 0.7 -8.0 -5.8 93 93 A Q E -D 72 0B 47 -21,-2.3 -21,-2.6 -2,-0.3 2,-0.6 -0.978 19.5-137.6-146.1 157.9 3.7 -8.9 -3.6 94 94 A T E D 71 0B 94 -2,-0.3 -23,-0.2 -23,-0.2 -74,-0.0 -0.913 360.0 360.0-122.3 104.3 5.3 -12.0 -2.1 95 95 A T 0 0 62 -25,-2.0 -26,-0.5 -2,-0.6 -73,-0.1 -0.172 360.0 360.0 -47.8 360.0 6.4 -11.7 1.5