==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=18-SEP-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 26-SEP-07 2JVW . COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO FISCHERI; . AUTHOR J.M.ARAMINI,P.ROSSI,D.WANG,C.NWOSU,L.A.OWENS,R.XIAO,J.LIU,M. . 82 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7093.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 61.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 9.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 36 43.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 214 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 97.7 14.0 -2.0 -18.4 2 2 A A + 0 0 102 2,-0.1 2,-0.9 1,-0.0 0, 0.0 0.746 360.0 101.4 -67.8 -25.2 15.9 -5.3 -18.3 3 3 A L S S- 0 0 150 1,-0.0 2,-0.2 2,-0.0 -1,-0.0 -0.507 70.8-149.3 -61.8 100.6 19.1 -3.2 -17.8 4 4 A I - 0 0 139 -2,-0.9 2,-1.5 1,-0.1 -2,-0.1 -0.524 18.7-111.6 -77.8 142.6 19.6 -3.6 -14.0 5 5 A M - 0 0 128 -2,-0.2 2,-1.3 1,-0.1 -1,-0.1 -0.560 33.9-177.6 -77.6 89.8 21.2 -0.8 -12.1 6 6 A T + 0 0 126 -2,-1.5 2,-0.3 2,-0.0 -1,-0.1 -0.246 40.1 124.3 -83.6 49.6 24.6 -2.3 -11.1 7 7 A Q - 0 0 120 -2,-1.3 -2,-0.0 2,-0.2 0, 0.0 -0.804 68.1-135.1-111.8 150.1 25.6 0.8 -9.1 8 8 A Q S S+ 0 0 165 -2,-0.3 -1,-0.1 2,-0.1 -2,-0.0 0.632 82.4 100.6 -73.8 -14.5 26.7 1.2 -5.5 9 9 A N S S- 0 0 94 1,-0.1 -2,-0.2 2,-0.0 3,-0.0 -0.322 77.7-127.5 -65.4 154.8 24.3 4.2 -5.4 10 10 A N > + 0 0 85 1,-0.1 3,-1.6 -2,-0.0 4,-0.1 -0.788 27.4 176.2-111.3 90.2 20.8 3.7 -3.8 11 11 A P T 3 S+ 0 0 81 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 0.403 86.4 48.1 -73.5 5.5 18.1 4.9 -6.3 12 12 A L T 3 S+ 0 0 72 1,-0.1 3,-0.5 3,-0.1 -2,-0.0 0.036 71.9 116.8-129.7 24.6 15.5 3.7 -3.7 13 13 A H S < S+ 0 0 161 -3,-1.6 2,-0.1 1,-0.3 -1,-0.1 0.575 88.4 25.2 -73.3 -8.9 17.0 5.3 -0.6 14 14 A G S S- 0 0 72 -4,-0.1 2,-0.3 -3,-0.1 -1,-0.3 -0.503 76.2-178.5-157.4 80.9 13.8 7.5 -0.3 15 15 A I - 0 0 49 -3,-0.5 2,-0.1 -2,-0.1 -3,-0.1 -0.647 18.5-136.8 -88.4 136.9 10.6 6.1 -1.8 16 16 A T > - 0 0 91 -2,-0.3 4,-2.9 1,-0.1 5,-0.1 -0.438 27.2-105.2 -85.2 164.4 7.3 8.1 -1.6 17 17 A L H > S+ 0 0 37 1,-0.2 4,-3.0 2,-0.2 5,-0.3 0.901 118.4 55.4 -55.0 -46.7 3.8 6.7 -0.8 18 18 A Q H > S+ 0 0 103 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.945 114.9 37.7 -52.7 -54.5 2.7 6.9 -4.5 19 19 A K H > S+ 0 0 92 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.904 116.0 55.7 -64.4 -41.6 5.6 4.8 -5.7 20 20 A L H X S+ 0 0 14 -4,-2.9 4,-1.6 2,-0.2 -2,-0.2 0.952 109.5 42.8 -57.4 -57.4 5.5 2.5 -2.6 21 21 A L H X S+ 0 0 0 -4,-3.0 4,-2.1 1,-0.2 5,-0.2 0.903 111.4 56.4 -58.9 -43.3 1.8 1.5 -2.9 22 22 A T H X S+ 0 0 30 -4,-1.8 4,-1.8 -5,-0.3 -1,-0.2 0.929 106.3 49.9 -53.7 -47.7 2.3 1.0 -6.7 23 23 A E H X S+ 0 0 20 -4,-2.2 4,-2.6 1,-0.2 5,-0.3 0.832 107.2 55.0 -62.3 -34.0 5.1 -1.5 -6.1 24 24 A L H X>S+ 0 0 0 -4,-1.6 4,-2.3 2,-0.2 5,-1.9 0.891 108.5 47.8 -66.0 -38.8 2.9 -3.4 -3.5 25 25 A V H <5S+ 0 0 33 -4,-2.1 -2,-0.2 3,-0.2 -1,-0.2 0.827 115.1 47.6 -68.6 -31.7 0.3 -3.8 -6.3 26 26 A E H <5S+ 0 0 125 -4,-1.8 -2,-0.2 -5,-0.2 -1,-0.2 0.878 123.4 29.7 -73.5 -41.7 3.0 -5.0 -8.6 27 27 A H H <5S+ 0 0 95 -4,-2.6 -2,-0.2 -5,-0.1 -3,-0.2 0.648 140.9 9.6 -99.9 -18.8 4.7 -7.5 -6.3 28 28 A Y T <5S- 0 0 81 -4,-2.3 -3,-0.2 -5,-0.3 2,-0.2 0.622 90.5-137.9-121.3 -68.5 1.7 -8.6 -4.1 29 29 A G >< - 0 0 16 -5,-1.9 4,-1.6 1,-0.1 5,-0.2 -0.535 34.6 -68.0 122.0 170.1 -1.7 -7.4 -5.4 30 30 A W H > S+ 0 0 51 1,-0.2 4,-2.8 2,-0.2 5,-0.2 0.835 123.1 61.3 -66.2 -33.8 -4.9 -5.9 -4.1 31 31 A E H > S+ 0 0 106 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.952 106.3 42.8 -59.1 -55.0 -5.9 -9.2 -2.3 32 32 A E H > S+ 0 0 96 1,-0.2 4,-2.6 2,-0.2 5,-0.3 0.917 116.4 49.1 -58.9 -44.9 -2.9 -9.3 0.0 33 33 A L H X S+ 0 0 0 -4,-1.6 4,-2.5 1,-0.2 -1,-0.2 0.916 112.3 47.6 -61.1 -44.7 -3.2 -5.5 0.8 34 34 A S H <>S+ 0 0 26 -4,-2.8 5,-0.6 1,-0.2 -1,-0.2 0.794 113.9 48.5 -67.9 -30.5 -7.0 -5.8 1.5 35 35 A Y H <5S+ 0 0 181 -4,-2.0 -2,-0.2 -5,-0.2 -1,-0.2 0.908 115.4 41.5 -76.2 -45.1 -6.4 -8.8 3.8 36 36 A M H <5S+ 0 0 47 -4,-2.6 2,-0.8 1,-0.2 -2,-0.2 0.894 115.2 53.5 -70.9 -41.5 -3.5 -7.3 5.8 37 37 A V T <5S- 0 0 2 -4,-2.5 2,-2.6 -5,-0.3 -1,-0.2 -0.852 89.0-139.4 -96.6 106.1 -5.3 -3.9 6.0 38 38 A N T 5 + 0 0 140 -2,-0.8 2,-0.3 -3,-0.1 -3,-0.1 -0.327 63.3 102.6 -71.0 72.0 -8.8 -4.6 7.4 39 39 A I S S+ 0 0 10 -2,-1.1 3,-1.8 -7,-0.0 -1,-0.2 0.503 81.4 44.7-134.1 -59.1 -10.7 -0.1 -0.2 42 42 A F T 3 S+ 0 0 2 1,-0.3 -8,-0.1 -3,-0.3 -2,-0.1 0.734 118.8 49.2 -64.5 -21.9 -8.2 -2.3 -2.2 43 43 A K T 3 S+ 0 0 120 -4,-0.3 2,-0.5 1,-0.1 -1,-0.3 0.253 101.6 76.7 -98.0 10.0 -11.2 -4.6 -2.8 44 44 A K S < S- 0 0 121 -3,-1.8 3,-0.3 1,-0.2 -1,-0.1 -0.915 119.1 -26.2-128.7 104.3 -13.4 -1.7 -3.9 45 45 A D S S- 0 0 113 -2,-0.5 2,-0.7 1,-0.2 -1,-0.2 0.991 79.9-125.9 54.5 71.1 -12.8 -0.3 -7.5 46 46 A P + 0 0 82 0, 0.0 2,-0.4 0, 0.0 -1,-0.2 -0.213 54.1 148.4 -53.7 93.2 -9.1 -1.4 -7.7 47 47 A S > - 0 0 52 -2,-0.7 4,-2.4 -3,-0.3 5,-0.2 -0.991 44.4-152.7-135.9 127.6 -7.5 2.0 -8.6 48 48 A I H > S+ 0 0 45 -2,-0.4 4,-2.6 2,-0.2 5,-0.2 0.975 99.8 47.1 -58.4 -57.2 -4.0 3.3 -7.7 49 49 A K H > S+ 0 0 177 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.866 114.8 47.0 -55.7 -42.8 -4.9 7.0 -7.7 50 50 A S H > S+ 0 0 67 2,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.939 111.6 49.7 -65.9 -47.9 -8.1 6.4 -5.6 51 51 A S H X S+ 0 0 1 -4,-2.4 4,-2.4 1,-0.2 -2,-0.2 0.898 108.1 54.9 -59.2 -42.2 -6.3 4.2 -3.0 52 52 A L H X S+ 0 0 28 -4,-2.6 4,-1.8 1,-0.2 -1,-0.2 0.941 108.7 47.3 -55.3 -50.4 -3.6 6.9 -2.7 53 53 A K H X S+ 0 0 159 -4,-1.8 4,-1.7 1,-0.2 -1,-0.2 0.877 110.6 53.1 -60.1 -38.7 -6.2 9.6 -1.9 54 54 A F H X S+ 0 0 58 -4,-2.1 4,-3.1 1,-0.2 -1,-0.2 0.900 107.4 50.9 -63.2 -41.6 -7.8 7.2 0.6 55 55 A L H < S+ 0 0 0 -4,-2.4 7,-0.5 1,-0.2 -1,-0.2 0.833 106.4 56.4 -65.2 -33.2 -4.4 6.7 2.4 56 56 A R H < S+ 0 0 196 -4,-1.8 3,-0.2 -5,-0.2 -1,-0.2 0.911 117.7 32.3 -64.0 -44.9 -4.0 10.5 2.6 57 57 A K H < S+ 0 0 163 -4,-1.7 2,-1.5 1,-0.2 -2,-0.2 0.954 120.0 50.8 -78.0 -54.4 -7.4 10.9 4.4 58 58 A T S >X S+ 0 0 29 -4,-3.1 4,-1.2 1,-0.2 3,-0.5 -0.644 76.0 178.8 -83.4 85.0 -7.3 7.6 6.4 59 59 A D H 3> S+ 0 0 72 -2,-1.5 4,-2.0 1,-0.2 3,-0.3 0.879 70.7 57.2 -62.4 -45.1 -3.8 8.1 7.7 60 60 A W H 3> S+ 0 0 132 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.850 103.9 55.6 -58.0 -34.9 -3.5 4.9 9.8 61 61 A A H <> S+ 0 0 0 -3,-0.5 4,-2.4 2,-0.2 -1,-0.2 0.912 105.4 52.3 -62.0 -42.1 -4.2 2.8 6.6 62 62 A R H X S+ 0 0 60 -4,-1.2 4,-2.1 -7,-0.5 -2,-0.2 0.909 107.4 51.7 -58.0 -44.3 -1.2 4.6 5.0 63 63 A E H X S+ 0 0 81 -4,-2.0 4,-1.8 1,-0.2 -1,-0.2 0.869 108.8 51.2 -62.0 -37.6 1.0 3.6 7.9 64 64 A R H X S+ 0 0 101 -4,-1.9 4,-2.2 2,-0.2 -2,-0.2 0.933 106.7 53.8 -62.7 -46.8 -0.1 -0.0 7.5 65 65 A V H X S+ 0 0 0 -4,-2.4 4,-1.8 1,-0.2 -2,-0.2 0.897 107.2 51.2 -55.3 -44.2 0.8 0.1 3.7 66 66 A E H X S+ 0 0 75 -4,-2.1 4,-1.8 1,-0.2 -1,-0.2 0.927 108.8 51.0 -58.0 -46.0 4.3 1.3 4.6 67 67 A N H X S+ 0 0 78 -4,-1.8 4,-1.7 1,-0.2 -2,-0.2 0.860 105.9 56.4 -61.4 -36.3 4.7 -1.6 7.1 68 68 A I H X S+ 0 0 6 -4,-2.2 4,-1.4 2,-0.2 -1,-0.2 0.898 105.0 51.3 -61.1 -41.6 3.5 -3.9 4.2 69 69 A Y H X S+ 0 0 14 -4,-1.8 4,-2.4 1,-0.2 -2,-0.2 0.874 105.9 55.5 -63.5 -36.4 6.4 -2.6 2.1 70 70 A L H X S+ 0 0 100 -4,-1.8 4,-2.2 2,-0.2 -1,-0.2 0.864 101.7 57.1 -63.3 -36.9 8.7 -3.4 5.0 71 71 A K H < S+ 0 0 95 -4,-1.7 4,-0.4 2,-0.2 -1,-0.2 0.890 108.5 47.7 -57.5 -40.1 7.4 -7.0 4.9 72 72 A L H >X S+ 0 0 18 -4,-1.4 4,-1.9 1,-0.2 3,-1.2 0.933 109.0 53.2 -64.6 -46.3 8.6 -7.0 1.3 73 73 A Q H 3< S+ 0 0 59 -4,-2.4 -2,-0.2 1,-0.3 -1,-0.2 0.863 105.3 53.0 -60.7 -38.9 12.0 -5.5 2.2 74 74 A R T 3< S+ 0 0 209 -4,-2.2 -1,-0.3 1,-0.2 -2,-0.2 0.610 118.4 38.0 -74.2 -11.5 12.7 -8.2 4.9 75 75 A H T <4 S+ 0 0 161 -3,-1.2 -2,-0.2 -4,-0.4 -1,-0.2 0.555 105.7 86.4-106.6 -18.1 12.0 -10.9 2.2 76 76 A K S < S- 0 0 76 -4,-1.9 2,-0.5 1,-0.1 -3,-0.0 -0.303 101.4 -68.5 -82.0 165.4 13.7 -8.9 -0.7 77 77 A E - 0 0 157 1,-0.1 2,-0.5 -2,-0.1 -1,-0.1 -0.371 54.3-141.1 -57.0 106.4 17.4 -9.0 -1.7 78 78 A R - 0 0 213 -2,-0.5 2,-0.1 -4,-0.1 -1,-0.1 -0.617 18.2-117.4 -75.9 120.4 19.1 -7.2 1.2 79 79 A N - 0 0 118 -2,-0.5 -1,-0.1 1,-0.1 3,-0.1 -0.361 32.7-140.0 -58.3 128.3 22.0 -4.9 0.0 80 80 A Q - 0 0 156 1,-0.2 -1,-0.1 -2,-0.1 -3,-0.0 0.112 35.4 -58.3 -76.5-166.5 25.3 -6.2 1.5 81 81 A L 0 0 156 1,-0.1 -1,-0.2 0, 0.0 0, 0.0 -0.017 360.0 360.0 -68.3 179.0 28.2 -4.1 2.8 82 82 A E 0 0 250 -3,-0.1 -1,-0.1 0, 0.0 -2,-0.1 0.958 360.0 360.0 -83.4 360.0 30.2 -1.4 0.9