==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 29-DEC-08 2KCV . COMPND 2 MOLECULE: TETRATRICOPEPTIDE REPEAT DOMAIN PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: SALINIBACTER RUBER DSM 13855; . AUTHOR G.LIU,P.ROSSI,D.WANG,C.NWOSU,L.OWENS,R.XIAO,J.LIU,M.C.BARAN, . 99 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6478.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 77 77.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 62 62.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A E 0 0 199 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 110.1 -11.2 -0.4 18.2 2 2 A D > - 0 0 91 1,-0.0 3,-1.7 0, 0.0 6,-0.2 -0.937 360.0-121.7-115.1 146.1 -12.6 -3.0 15.7 3 3 A P T 3 S+ 0 0 77 0, 0.0 9,-0.0 0, 0.0 -1,-0.0 0.295 111.2 69.3 -69.8 10.7 -10.6 -4.7 12.9 4 4 A E T 3 S+ 0 0 157 4,-0.0 3,-0.0 5,-0.0 0, 0.0 0.660 76.5 97.0 -93.8 -25.2 -13.2 -3.2 10.5 5 5 A D S <> S- 0 0 71 -3,-1.7 4,-2.4 1,-0.1 5,-0.3 -0.445 84.1-124.2 -63.6 137.0 -11.8 0.4 11.2 6 6 A P H > S+ 0 0 57 0, 0.0 4,-1.4 0, 0.0 5,-0.1 0.886 107.9 40.0 -55.0 -51.9 -9.3 1.4 8.4 7 7 A F H > S+ 0 0 137 2,-0.2 4,-2.3 1,-0.2 5,-0.2 0.832 115.1 53.6 -66.0 -35.6 -6.3 2.2 10.7 8 8 A T H > S+ 0 0 44 -6,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.930 113.6 39.7 -67.6 -48.0 -7.0 -0.8 12.9 9 9 A R H X S+ 0 0 26 -4,-2.4 4,-1.5 -7,-0.2 -1,-0.2 0.715 114.7 55.4 -74.5 -27.0 -7.0 -3.5 10.1 10 10 A Y H X S+ 0 0 28 -4,-1.4 4,-1.6 -5,-0.3 -2,-0.2 0.925 111.9 42.2 -64.0 -50.9 -4.1 -1.6 8.4 11 11 A A H X S+ 0 0 28 -4,-2.3 4,-1.3 1,-0.2 -2,-0.2 0.837 115.0 51.4 -64.5 -36.1 -2.1 -2.0 11.7 12 12 A L H X S+ 0 0 67 -4,-1.9 4,-1.9 2,-0.2 -1,-0.2 0.812 105.6 55.2 -70.3 -34.5 -3.4 -5.6 12.0 13 13 A A H X S+ 0 0 0 -4,-1.5 4,-1.8 2,-0.2 -2,-0.2 0.868 105.2 52.6 -65.7 -38.3 -2.2 -6.2 8.4 14 14 A Q H X S+ 0 0 48 -4,-1.6 4,-1.6 2,-0.2 -2,-0.2 0.865 108.3 51.3 -61.9 -37.4 1.3 -5.1 9.4 15 15 A E H X S+ 0 0 82 -4,-1.3 4,-1.5 2,-0.2 -2,-0.2 0.858 106.5 53.2 -67.3 -39.3 1.0 -7.7 12.3 16 16 A H H <>S+ 0 0 53 -4,-1.9 5,-2.0 2,-0.2 -2,-0.2 0.873 107.3 52.5 -61.3 -39.1 0.0 -10.4 9.7 17 17 A L H ><5S+ 0 0 31 -4,-1.8 3,-1.4 1,-0.2 5,-0.2 0.912 109.3 49.2 -58.4 -44.2 3.2 -9.4 7.8 18 18 A K H 3<5S+ 0 0 147 -4,-1.6 -2,-0.2 1,-0.3 -1,-0.2 0.764 108.8 52.1 -69.5 -29.5 5.2 -9.9 11.1 19 19 A H T 3<5S- 0 0 136 -4,-1.5 -1,-0.3 -5,-0.1 -2,-0.2 0.248 118.9-112.7 -88.6 9.1 3.5 -13.3 11.6 20 20 A D T < 5S+ 0 0 138 -3,-1.4 2,-1.2 1,-0.1 3,-0.3 0.472 84.5 126.4 69.6 6.4 4.6 -14.3 8.0 21 21 A N >>< + 0 0 77 -5,-2.0 4,-1.9 1,-0.2 3,-0.6 -0.385 20.8 148.9 -87.0 55.4 0.9 -14.3 7.0 22 22 A A H 3> + 0 0 13 -2,-1.2 4,-1.9 1,-0.2 -1,-0.2 0.800 66.3 60.5 -60.3 -33.6 1.7 -11.9 4.2 23 23 A S H 3> S+ 0 0 79 -3,-0.3 4,-1.7 2,-0.2 -1,-0.2 0.865 106.5 44.7 -59.8 -41.9 -1.2 -13.5 2.2 24 24 A R H <> S+ 0 0 161 -3,-0.6 4,-1.5 2,-0.2 -2,-0.2 0.862 114.2 49.4 -73.0 -37.6 -3.7 -12.5 4.9 25 25 A A H X S+ 0 0 0 -4,-1.9 4,-2.2 2,-0.2 -2,-0.2 0.820 107.2 57.2 -65.7 -34.7 -2.2 -9.0 5.1 26 26 A L H X S+ 0 0 33 -4,-1.9 4,-2.6 2,-0.2 5,-0.2 0.946 106.3 47.2 -63.1 -52.2 -2.4 -8.8 1.2 27 27 A A H X S+ 0 0 57 -4,-1.7 4,-1.9 1,-0.2 -1,-0.2 0.852 111.2 53.3 -56.4 -41.8 -6.1 -9.4 1.2 28 28 A L H X S+ 0 0 30 -4,-1.5 4,-2.1 2,-0.2 -2,-0.2 0.934 113.2 41.3 -59.6 -50.3 -6.5 -6.7 4.0 29 29 A F H X S+ 0 0 0 -4,-2.2 4,-1.5 2,-0.2 -2,-0.2 0.890 113.5 52.8 -68.2 -43.0 -4.6 -4.0 2.0 30 30 A E H X S+ 0 0 75 -4,-2.6 4,-1.8 2,-0.2 -1,-0.2 0.857 112.2 46.3 -60.5 -37.0 -6.3 -4.9 -1.3 31 31 A E H X S+ 0 0 77 -4,-1.9 4,-2.6 -5,-0.2 5,-0.4 0.898 106.1 59.4 -70.7 -40.6 -9.7 -4.5 0.3 32 32 A L H X S+ 0 0 0 -4,-2.1 4,-1.5 1,-0.2 7,-0.3 0.808 108.1 47.0 -56.1 -35.9 -8.6 -1.2 1.9 33 33 A V H < S+ 0 0 35 -4,-1.5 -1,-0.2 2,-0.2 -2,-0.2 0.966 113.9 44.2 -67.1 -57.3 -8.0 0.1 -1.6 34 34 A E H < S+ 0 0 147 -4,-1.8 -2,-0.2 1,-0.2 -3,-0.1 0.815 125.4 33.2 -63.5 -34.5 -11.4 -1.1 -3.2 35 35 A T H < S+ 0 0 71 -4,-2.6 -1,-0.2 1,-0.2 -3,-0.2 0.878 133.7 25.8 -87.3 -42.7 -13.5 0.1 -0.2 36 36 A D >< + 0 0 67 -4,-1.5 3,-0.9 -5,-0.4 -1,-0.2 -0.741 59.9 166.1-127.4 78.0 -11.4 3.2 0.9 37 37 A P T 3 S+ 0 0 69 0, 0.0 32,-0.1 0, 0.0 -1,-0.1 0.686 78.2 66.4 -67.1 -15.6 -9.5 4.6 -2.2 38 38 A D T 3 S+ 0 0 92 -3,-0.1 2,-0.9 -5,-0.1 -5,-0.1 0.842 74.0 95.0 -68.2 -39.6 -8.9 7.7 0.0 39 39 A Y X> - 0 0 50 -3,-0.9 3,-0.7 -7,-0.3 4,-0.7 -0.434 50.9-179.6 -68.4 99.0 -6.7 5.9 2.6 40 40 A V H 3> S+ 0 0 10 -2,-0.9 4,-1.1 1,-0.2 3,-0.4 0.807 71.8 71.3 -69.2 -32.8 -3.2 6.7 1.2 41 41 A G H 3> S+ 0 0 14 1,-0.2 4,-1.2 2,-0.2 -1,-0.2 0.768 93.8 56.7 -58.5 -31.2 -1.4 4.7 4.0 42 42 A T H <> S+ 0 0 0 -3,-0.7 4,-2.7 1,-0.2 5,-0.3 0.949 98.6 58.9 -59.2 -52.6 -2.7 1.4 2.4 43 43 A Y H X S+ 0 0 2 -4,-0.7 4,-1.8 -3,-0.4 -2,-0.2 0.799 105.8 47.5 -57.0 -44.0 -1.1 2.1 -1.1 44 44 A Y H X S+ 0 0 63 -4,-1.1 4,-2.2 2,-0.2 -1,-0.2 0.988 117.3 40.8 -54.6 -61.9 2.5 2.4 0.2 45 45 A H H X S+ 0 0 42 -4,-1.2 4,-1.6 1,-0.2 -2,-0.2 0.765 115.4 51.2 -65.6 -31.2 2.4 -0.8 2.4 46 46 A L H X S+ 0 0 2 -4,-2.7 4,-1.9 2,-0.2 -1,-0.2 0.879 111.5 47.6 -72.4 -40.2 0.4 -2.9 -0.2 47 47 A G H X S+ 0 0 0 -4,-1.8 4,-2.2 -5,-0.3 -2,-0.2 0.864 109.8 52.2 -68.8 -37.9 3.0 -1.9 -2.9 48 48 A K H X S+ 0 0 71 -4,-2.2 4,-1.4 2,-0.2 -2,-0.2 0.900 111.0 48.4 -62.7 -40.9 5.9 -2.8 -0.6 49 49 A L H X S+ 0 0 2 -4,-1.6 4,-1.6 2,-0.2 -2,-0.2 0.857 108.2 54.4 -66.9 -39.3 4.2 -6.2 -0.0 50 50 A Y H <>S+ 0 0 22 -4,-1.9 5,-2.7 2,-0.2 -2,-0.2 0.919 105.0 53.4 -57.8 -47.0 3.7 -6.6 -3.8 51 51 A E H ><5S+ 0 0 28 -4,-2.2 3,-1.1 1,-0.2 5,-0.2 0.856 107.2 52.7 -57.7 -37.2 7.5 -6.1 -4.4 52 52 A R H 3<5S+ 0 0 149 -4,-1.4 -1,-0.2 1,-0.2 -2,-0.2 0.883 109.2 48.5 -62.7 -41.2 8.2 -8.9 -1.8 53 53 A L T 3<5S- 0 0 70 -4,-1.6 -1,-0.2 -3,-0.2 -2,-0.2 0.210 119.7-109.4 -87.5 13.3 5.8 -11.3 -3.8 54 54 A D T < 5S+ 0 0 147 -3,-1.1 2,-0.5 1,-0.1 3,-0.3 0.625 85.7 127.4 62.1 18.2 7.6 -10.4 -7.2 55 55 A R >< + 0 0 132 -5,-2.7 4,-1.7 1,-0.2 3,-0.4 -0.312 20.8 144.7 -94.8 47.2 4.4 -8.5 -8.1 56 56 A T H > + 0 0 12 -2,-0.5 4,-2.0 1,-0.2 -1,-0.2 0.807 66.7 54.3 -61.2 -34.2 6.5 -5.4 -8.8 57 57 A D H > S+ 0 0 68 -3,-0.3 4,-1.6 2,-0.2 -1,-0.2 0.893 108.3 49.2 -66.2 -41.3 4.2 -4.3 -11.8 58 58 A D H > S+ 0 0 45 -3,-0.4 4,-2.0 1,-0.2 -2,-0.2 0.830 108.4 55.2 -65.0 -36.0 1.1 -4.5 -9.4 59 59 A A H X S+ 0 0 0 -4,-1.7 4,-2.6 2,-0.2 -2,-0.2 0.919 104.4 52.6 -61.1 -47.5 3.2 -2.3 -6.9 60 60 A I H X S+ 0 0 9 -4,-2.0 4,-2.0 1,-0.2 -2,-0.2 0.880 110.9 48.0 -55.2 -43.2 3.7 0.4 -9.7 61 61 A D H X S+ 0 0 98 -4,-1.6 4,-2.0 2,-0.2 -1,-0.2 0.904 112.3 48.3 -64.6 -45.4 -0.1 0.5 -10.2 62 62 A T H X S+ 0 0 10 -4,-2.0 4,-1.9 2,-0.2 -2,-0.2 0.864 112.3 48.3 -66.0 -40.3 -0.8 0.7 -6.5 63 63 A Y H X S+ 0 0 0 -4,-2.6 4,-2.2 2,-0.2 -1,-0.2 0.883 109.7 52.9 -66.6 -42.4 1.8 3.5 -5.9 64 64 A A H X S+ 0 0 8 -4,-2.0 4,-1.4 2,-0.2 -2,-0.2 0.880 110.7 46.5 -59.9 -43.6 0.4 5.5 -9.0 65 65 A Q H X S+ 0 0 83 -4,-2.0 4,-1.4 1,-0.2 -1,-0.2 0.874 112.2 52.7 -62.5 -40.5 -3.2 5.2 -7.4 66 66 A G H X S+ 0 0 0 -4,-1.9 4,-1.7 1,-0.2 -2,-0.2 0.865 102.6 57.8 -60.7 -41.4 -1.6 6.3 -4.1 67 67 A I H X S+ 0 0 29 -4,-2.2 4,-2.3 2,-0.2 5,-0.3 0.897 104.3 51.4 -57.7 -45.5 0.1 9.4 -5.8 68 68 A E H X S+ 0 0 105 -4,-1.4 4,-1.1 1,-0.2 5,-0.2 0.913 117.5 37.6 -59.6 -47.0 -3.4 10.8 -7.0 69 69 A V H X>S+ 0 0 25 -4,-1.4 5,-2.2 2,-0.2 4,-1.2 0.656 113.8 58.7 -81.5 -19.7 -4.9 10.5 -3.5 70 70 A A H <5S+ 0 0 0 -4,-1.7 9,-0.3 3,-0.2 -2,-0.2 0.919 108.0 42.7 -74.0 -47.8 -1.6 11.6 -1.8 71 71 A R H <5S+ 0 0 168 -4,-2.3 -2,-0.2 -5,-0.1 -3,-0.1 0.829 129.4 28.2 -69.5 -35.3 -1.3 15.0 -3.5 72 72 A E H <5S+ 0 0 126 -4,-1.1 -3,-0.2 -5,-0.3 -2,-0.2 0.916 138.6 16.3 -90.1 -54.5 -5.0 15.8 -3.1 73 73 A E T <5S+ 0 0 123 -4,-1.2 -3,-0.2 -5,-0.2 -2,-0.1 0.860 124.3 43.2 -93.4 -42.8 -6.2 14.0 0.1 74 74 A G S - 0 0 82 1,-0.0 4,-2.0 0, 0.0 3,-0.3 -0.748 35.9 -96.8-119.2 176.1 0.2 15.2 2.5 76 76 A Q H > S+ 0 0 125 -2,-0.2 4,-2.6 1,-0.2 5,-0.2 0.777 122.7 65.2 -59.7 -29.9 3.5 15.8 0.6 77 77 A K H > S+ 0 0 144 2,-0.2 4,-1.6 1,-0.2 -1,-0.2 0.942 106.1 40.5 -54.9 -50.6 5.0 13.2 3.0 78 78 A D H > S+ 0 0 42 -3,-0.3 4,-2.0 -8,-0.2 5,-0.2 0.922 114.5 53.4 -64.5 -46.9 2.7 10.5 1.4 79 79 A L H X S+ 0 0 19 -4,-2.0 4,-2.2 -9,-0.3 5,-0.2 0.918 109.4 46.2 -57.3 -51.4 3.2 11.8 -2.1 80 80 A S H X S+ 0 0 55 -4,-2.6 4,-1.9 1,-0.2 -1,-0.2 0.862 112.7 50.8 -62.4 -40.6 7.1 11.8 -2.0 81 81 A E H X S+ 0 0 61 -4,-1.6 4,-2.4 -5,-0.2 -1,-0.2 0.854 112.3 45.7 -66.3 -39.8 7.2 8.2 -0.5 82 82 A L H X S+ 0 0 1 -4,-2.0 4,-1.7 2,-0.2 -2,-0.2 0.868 114.5 47.0 -73.7 -39.1 4.8 6.7 -3.1 83 83 A Q H X S+ 0 0 81 -4,-2.2 4,-1.6 -5,-0.2 -2,-0.2 0.855 116.8 46.6 -66.6 -36.7 6.7 8.4 -6.0 84 84 A D H X S+ 0 0 89 -4,-1.9 4,-1.6 -5,-0.2 -2,-0.2 0.897 110.3 51.1 -70.0 -45.5 10.0 7.2 -4.4 85 85 A A H X S+ 0 0 0 -4,-2.4 4,-1.1 1,-0.2 -2,-0.2 0.834 113.4 44.8 -68.6 -35.3 8.7 3.6 -3.8 86 86 A K H X S+ 0 0 32 -4,-1.7 4,-2.1 2,-0.2 -1,-0.2 0.878 106.8 58.8 -72.9 -39.0 7.6 3.2 -7.5 87 87 A L H < S+ 0 0 109 -4,-1.6 4,-0.4 1,-0.2 -2,-0.2 0.829 110.2 43.5 -65.6 -31.9 10.8 4.7 -9.0 88 88 A K H >< S+ 0 0 78 -4,-1.6 3,-0.9 2,-0.2 4,-0.3 0.838 110.9 55.1 -73.9 -37.2 12.9 2.1 -7.3 89 89 A A H >X S+ 0 0 0 -4,-1.1 3,-1.0 1,-0.2 4,-0.9 0.819 97.5 64.4 -63.3 -32.6 10.3 -0.6 -8.3 90 90 A E T 3< S+ 0 0 40 -4,-2.1 6,-0.8 1,-0.2 4,-0.4 0.791 107.8 43.2 -54.6 -30.5 10.8 0.6 -12.0 91 91 A G T <4 S+ 0 0 49 -3,-0.9 -1,-0.2 -4,-0.4 -2,-0.2 0.395 97.1 75.9-102.0 -1.9 14.4 -0.7 -11.6 92 92 A L T <4 S+ 0 0 97 -3,-1.0 -2,-0.1 -4,-0.3 -3,-0.1 0.990 116.7 15.2 -68.2 -67.4 13.7 -4.0 -9.8 93 93 A E S < S- 0 0 68 -4,-0.9 -2,-0.1 1,-0.0 -1,-0.1 0.693 91.2-147.2 -77.4 -24.2 12.4 -6.0 -12.8 94 94 A H S S+ 0 0 159 -5,-0.4 -3,-0.1 -4,-0.4 -4,-0.1 0.698 77.9 100.3 58.0 23.1 14.0 -3.3 -15.2 95 95 A H + 0 0 152 -5,-0.1 -1,-0.1 2,-0.0 -4,-0.1 -0.036 50.9 149.4-122.0 24.4 10.9 -4.2 -17.4 96 96 A H - 0 0 100 -6,-0.8 2,-0.2 1,-0.1 -6,-0.0 -0.248 33.6-144.0 -66.1 149.7 8.9 -1.2 -16.4 97 97 A H - 0 0 101 -40,-0.1 2,-0.9 1,-0.0 -1,-0.1 -0.609 26.3 -86.0-113.9 171.0 6.5 0.4 -18.9 98 98 A H 0 0 184 -2,-0.2 -1,-0.0 1,-0.2 -2,-0.0 -0.699 360.0 360.0 -86.8 103.2 5.3 4.0 -19.7 99 99 A H 0 0 171 -2,-0.9 -1,-0.2 0, 0.0 -38,-0.0 0.868 360.0 360.0 -92.0 360.0 2.4 5.0 -17.4