==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 15-NOV-01 1KEF . COMPND 2 MOLECULE: SYNAPSE ASSOCIATED PROTEIN-90; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.PISERCHIO,M.PELLEGRINI,S.MEHTA,S.M.BLACKMAN,E.P.GARCIA, . 93 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6176.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 64.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 17 18.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 22 23.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 11.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A E 0 0 147 0, 0.0 2,-0.4 0, 0.0 88,-0.1 0.000 360.0 360.0 360.0 -65.4 3.1 -5.9 -17.0 2 2 A Y - 0 0 145 86,-0.3 2,-0.5 2,-0.0 86,-0.2 -0.996 360.0-169.0-126.3 128.0 1.2 -2.6 -16.0 3 3 A E E -A 87 0A 36 84,-0.8 84,-2.0 -2,-0.4 2,-0.6 -0.818 8.6-171.2-116.1 88.7 -2.5 -2.6 -14.9 4 4 A E E -A 86 0A 107 -2,-0.5 2,-0.8 82,-0.2 82,-0.2 -0.720 5.3-164.5 -76.5 115.8 -3.5 1.1 -14.8 5 5 A I E -A 85 0A 3 80,-1.7 80,-1.5 -2,-0.6 2,-0.8 -0.841 3.4-158.8-112.1 92.2 -7.0 1.1 -13.1 6 6 A T E +A 84 0A 71 -2,-0.8 78,-0.2 78,-0.2 2,-0.2 -0.636 24.7 166.3 -77.9 107.2 -8.7 4.5 -13.9 7 7 A L E -A 83 0A 8 76,-2.3 76,-1.4 -2,-0.8 2,-0.2 -0.553 26.9-126.8-108.6 175.6 -11.3 5.0 -11.2 8 8 A E - 0 0 95 35,-0.4 74,-0.2 74,-0.2 73,-0.2 -0.558 30.0-101.8-107.9 179.6 -13.4 8.0 -10.0 9 9 A R + 0 0 131 -2,-0.2 2,-1.3 1,-0.2 72,-0.1 0.889 50.2 172.6 -62.5 -46.4 -14.0 9.7 -6.6 10 10 A G - 0 0 18 33,-0.1 2,-0.2 71,-0.1 33,-0.2 -0.535 56.3 -48.0 70.5 -89.2 -17.5 8.0 -6.3 11 11 A N S S+ 0 0 99 31,-2.6 2,-0.0 -2,-1.3 -3,-0.0 -0.945 101.6 5.2-163.8 161.5 -18.3 9.1 -2.7 12 12 A S S S- 0 0 114 -2,-0.2 3,-0.0 31,-0.0 30,-0.0 -0.323 111.6 -30.3 70.2-139.6 -16.5 9.2 0.8 13 13 A G S S- 0 0 53 -2,-0.0 -2,-0.1 2,-0.0 29,-0.0 0.882 100.7 -65.1 -73.6 -96.9 -12.8 8.1 1.1 14 14 A L - 0 0 19 2,-0.1 30,-0.4 -4,-0.1 -3,-0.3 0.618 50.1-116.3-121.6 -72.2 -12.0 5.4 -1.6 15 15 A G S S+ 0 0 19 1,-0.5 24,-1.4 28,-0.2 2,-0.3 -0.264 86.8 65.5 151.9 -63.0 -13.8 2.0 -1.3 16 16 A F E S-B 38 0A 12 22,-0.2 2,-0.5 20,-0.0 -1,-0.5 -0.688 81.5-117.7 -90.2 146.9 -10.9 -0.5 -0.7 17 17 A S E -B 37 0A 49 20,-1.9 19,-2.9 -2,-0.3 20,-0.6 -0.720 32.7-155.2 -78.2 125.1 -8.6 -0.8 2.4 18 18 A I E -B 35 0A 24 -2,-0.5 2,-0.6 17,-0.2 17,-0.2 -0.761 11.5-124.2-101.9 150.0 -4.9 -0.1 1.4 19 19 A A E -B 34 0A 0 15,-1.1 15,-0.5 -2,-0.3 2,-0.1 -0.839 20.8-147.1 -93.4 124.0 -1.8 -1.4 3.3 20 20 A G + 0 0 1 -2,-0.6 6,-1.6 4,-0.4 7,-0.8 -0.338 20.9 171.0 -75.6 168.5 0.8 1.2 4.4 21 21 A G + 0 0 9 10,-0.3 47,-0.2 4,-0.2 11,-0.2 0.479 67.4 50.5-143.1 -61.8 4.5 0.4 4.6 22 22 A T S S+ 0 0 82 9,-0.8 46,-0.1 2,-0.2 10,-0.1 0.715 134.0 8.6 -61.5 -24.8 6.9 3.4 5.2 23 23 A D S S+ 0 0 129 8,-0.1 -1,-0.1 1,-0.1 -3,-0.0 0.686 140.5 26.4-123.6 -53.9 4.9 4.6 8.4 24 24 A N S S- 0 0 86 0, 0.0 2,-1.3 0, 0.0 -4,-0.4 -0.801 74.4-151.8-116.6 88.4 2.1 1.9 9.2 25 25 A P + 0 0 93 0, 0.0 -4,-0.2 0, 0.0 -6,-0.0 -0.401 25.9 165.6 -60.3 91.0 3.3 -1.6 8.0 26 26 A H S S+ 0 0 113 -6,-1.6 2,-0.3 -2,-1.3 -5,-0.1 0.881 71.1 49.0 -68.6 -42.7 -0.1 -3.4 7.3 27 27 A I S S- 0 0 59 -7,-0.8 2,-0.8 3,-0.2 7,-0.0 -0.759 83.1-136.3 -92.1 146.8 1.9 -6.2 5.4 28 28 A G S S+ 0 0 77 -2,-0.3 -7,-0.0 1,-0.1 -2,-0.0 -0.676 86.7 57.1-100.3 76.2 5.0 -7.9 6.9 29 29 A D S S- 0 0 145 -2,-0.8 -1,-0.1 1,-0.3 -8,-0.0 0.214 103.6 -3.8-159.0 -62.2 7.4 -7.9 3.8 30 30 A D - 0 0 103 2,-0.2 -1,-0.3 1,-0.0 -3,-0.2 -0.920 61.9-106.0-144.8 164.1 8.1 -4.4 2.1 31 31 A P S S+ 0 0 40 0, 0.0 -9,-0.8 0, 0.0 -10,-0.3 0.539 80.5 115.0 -74.2 -5.0 7.3 -0.6 2.2 32 32 A S S S- 0 0 15 -11,-0.2 2,-0.8 34,-0.1 -5,-0.2 -0.125 77.2-104.3 -61.0 160.2 5.1 -0.8 -1.0 33 33 A I E - C 0 56A 0 23,-0.9 23,-2.7 35,-0.1 2,-0.6 -0.794 38.3-172.4-100.2 103.6 1.3 -0.2 -0.9 34 34 A F E -BC 19 55A 44 -2,-0.8 -15,-1.1 -15,-0.5 21,-0.2 -0.840 20.8-131.8-104.9 116.8 -0.7 -3.5 -1.1 35 35 A I E -B 18 0A 3 19,-2.3 18,-1.3 -2,-0.6 -17,-0.2 -0.359 24.9-177.5 -66.1 138.1 -4.5 -3.4 -1.5 36 36 A T E + 0 0 67 -19,-2.9 2,-0.3 1,-0.3 17,-0.2 0.844 54.0 2.2-103.4 -72.1 -6.3 -5.7 1.1 37 37 A K E -B 17 0A 127 -20,-0.6 -20,-1.9 15,-0.1 2,-0.6 -0.924 55.2-134.7-129.8 151.3 -10.2 -5.7 0.7 38 38 A I E -B 16 0A 66 -2,-0.3 -22,-0.2 -22,-0.2 14,-0.1 -0.914 20.9-162.8-106.9 110.5 -12.8 -4.1 -1.6 39 39 A I - 0 0 94 -24,-1.4 6,-0.3 -2,-0.6 5,-0.3 -0.803 33.1 -97.3 -91.3 133.0 -15.8 -2.7 0.3 40 40 A P S S+ 0 0 120 0, 0.0 -1,-0.1 0, 0.0 4,-0.0 -0.026 86.8 4.8 -49.9 147.6 -19.1 -1.9 -1.9 41 41 A G S >> S+ 0 0 33 1,-0.1 2,-1.1 2,-0.1 3,-0.6 -0.151 85.3 91.6 66.6-167.8 -19.7 1.7 -3.1 42 42 A G T 34 S- 0 0 20 1,-0.2 -31,-2.6 2,-0.1 -27,-0.2 -0.245 114.4 -47.3 85.5 -54.0 -17.2 4.6 -2.6 43 43 A A T >> S+ 0 0 0 -2,-1.1 4,-0.9 -33,-0.2 3,-0.8 0.057 128.3 72.0 176.0 -43.9 -15.2 4.3 -5.9 44 44 A A H <> S+ 0 0 0 -3,-0.6 4,-2.3 -30,-0.4 5,-0.4 0.841 96.3 54.9 -65.1 -37.6 -14.2 0.5 -6.4 45 45 A A H 3< S+ 0 0 61 -4,-0.6 -1,-0.2 -6,-0.3 -3,-0.1 0.537 97.6 68.1 -65.0 -10.8 -17.9 -0.4 -7.3 46 46 A Q H <4 S+ 0 0 99 -3,-0.8 -2,-0.2 -5,-0.1 -1,-0.2 0.928 114.7 24.7 -75.2 -49.0 -17.7 2.3 -10.1 47 47 A D H < S- 0 0 72 -4,-0.9 -2,-0.2 -3,-0.1 -3,-0.1 0.896 88.1-160.7 -72.1 -48.4 -15.1 0.3 -12.2 48 48 A G < + 0 0 62 -4,-2.3 -3,-0.1 -5,-0.2 -4,-0.1 0.877 69.4 81.4 61.6 42.9 -16.1 -3.2 -10.7 49 49 A R + 0 0 118 -5,-0.4 -4,-0.1 2,-0.0 -5,-0.1 0.511 50.3 125.9-144.1 -35.3 -12.8 -4.8 -11.8 50 50 A L - 0 0 14 -6,-0.3 2,-0.4 1,-0.1 -12,-0.1 -0.071 51.6-136.2 -45.2 126.7 -10.0 -4.0 -9.2 51 51 A R - 0 0 163 1,-0.1 3,-0.4 -14,-0.0 -16,-0.1 -0.719 12.1-122.4 -92.0 135.3 -8.2 -7.0 -7.8 52 52 A V S S+ 0 0 76 -2,-0.4 -16,-0.2 1,-0.2 -15,-0.1 -0.239 95.3 38.1 -61.5 159.2 -7.4 -7.5 -4.1 53 53 A N S S+ 0 0 121 -18,-1.3 2,-0.6 -17,-0.2 -1,-0.2 0.801 82.5 153.4 60.8 34.1 -3.7 -8.0 -3.0 54 54 A D - 0 0 25 -3,-0.4 -19,-2.3 -19,-0.1 2,-1.0 -0.827 42.6-138.1-103.2 119.1 -2.6 -5.4 -5.7 55 55 A S E -C 34 0A 29 -2,-0.6 33,-0.6 33,-0.2 2,-0.3 -0.641 18.1-141.9 -78.8 102.3 0.7 -3.5 -5.1 56 56 A I E +CD 33 87A 3 -23,-2.7 -23,-0.9 -2,-1.0 31,-0.2 -0.502 30.2 166.3 -64.0 122.5 0.1 0.2 -6.1 57 57 A L + 0 0 43 29,-2.3 7,-1.1 -2,-0.3 30,-0.2 0.480 70.0 18.2-116.9 -11.4 3.3 1.5 -7.8 58 58 A F - 0 0 64 28,-0.3 2,-0.7 5,-0.2 28,-0.2 -0.313 60.6-177.0-162.9 73.8 2.1 4.9 -9.5 59 59 A V S S- 0 0 3 3,-0.3 3,-0.4 26,-0.2 26,-0.2 -0.645 72.8 -42.2 -69.6 111.8 -1.3 6.5 -8.2 60 60 A N S S- 0 0 46 24,-2.1 2,-0.6 -2,-0.7 26,-0.1 -0.324 118.5 -29.7 66.6-144.2 -1.7 9.5 -10.5 61 61 A E S S+ 0 0 187 14,-0.1 2,-0.4 2,-0.1 -1,-0.2 -0.490 111.7 113.7 -94.7 59.5 1.6 11.5 -11.2 62 62 A V S S- 0 0 41 -2,-0.6 2,-0.6 -3,-0.4 -3,-0.3 -0.984 72.5-124.4-139.1 117.1 2.9 10.5 -7.7 63 63 A D - 0 0 102 -2,-0.4 2,-0.5 -5,-0.1 3,-0.2 -0.520 36.1-176.0 -67.9 105.9 6.0 8.1 -7.3 64 64 A V + 0 0 0 -7,-1.1 -32,-0.1 -2,-0.6 4,-0.0 -0.940 45.3 82.2-116.7 123.5 4.6 5.2 -5.2 65 65 A R S S+ 0 0 121 -2,-0.5 -1,-0.1 -34,-0.2 -7,-0.1 0.022 99.6 31.3-179.1 -49.7 6.9 2.3 -4.0 66 66 A E S S+ 0 0 150 -3,-0.2 2,-0.3 -34,-0.1 -34,-0.1 -0.203 99.8 97.9-119.0 37.2 8.8 3.5 -0.8 67 67 A V S S- 0 0 45 -36,-0.2 -45,-0.1 1,-0.1 -2,-0.1 -0.961 71.3-116.4-128.1 143.1 6.0 5.8 0.5 68 68 A T >> - 0 0 19 -2,-0.3 4,-1.1 -47,-0.2 3,-0.8 -0.048 39.2 -89.4 -68.3 171.5 3.4 5.0 3.3 69 69 A H H 3> S+ 0 0 60 1,-0.2 4,-3.5 2,-0.2 3,-0.4 0.841 126.0 67.6 -47.5 -36.9 -0.5 4.8 3.0 70 70 A S H 3> S+ 0 0 66 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.869 99.5 48.5 -54.1 -41.6 -0.4 8.6 3.9 71 71 A A H <> S+ 0 0 14 -3,-0.8 4,-1.3 2,-0.2 -1,-0.2 0.761 115.4 44.7 -65.3 -29.6 1.3 9.2 0.4 72 72 A A H X S+ 0 0 0 -4,-1.1 4,-2.7 -3,-0.4 5,-0.3 0.924 112.0 51.6 -72.6 -50.3 -1.5 7.0 -1.2 73 73 A V H X S+ 0 0 55 -4,-3.5 4,-1.5 1,-0.2 -2,-0.2 0.867 116.8 41.1 -53.0 -43.7 -4.4 8.7 0.9 74 74 A E H X S+ 0 0 99 -4,-2.2 4,-3.2 -5,-0.2 5,-0.3 0.896 114.3 52.2 -68.1 -43.8 -3.0 12.2 -0.4 75 75 A A H X S+ 0 0 1 -4,-1.3 4,-1.1 2,-0.2 -2,-0.2 0.826 114.6 42.0 -63.1 -35.3 -2.4 10.8 -4.0 76 76 A L H X S+ 0 0 17 -4,-2.7 4,-1.2 2,-0.2 6,-0.2 0.823 118.8 45.6 -73.5 -38.7 -6.0 9.5 -4.3 77 77 A K H < S+ 0 0 159 -4,-1.5 -2,-0.2 -5,-0.3 3,-0.2 0.927 113.5 48.3 -69.2 -48.7 -7.5 12.7 -2.6 78 78 A E H < S+ 0 0 143 -4,-3.2 -3,-0.2 1,-0.2 -2,-0.2 0.843 107.0 59.4 -57.7 -38.4 -5.3 15.1 -4.8 79 79 A A H < S+ 0 0 11 -4,-1.1 2,-0.4 -5,-0.3 3,-0.2 0.911 83.6 175.2 -46.2 -50.8 -6.5 13.0 -7.8 80 80 A G S < S+ 0 0 30 -4,-1.2 -1,-0.2 1,-0.2 3,-0.1 -0.636 70.0 4.9 76.3-121.0 -10.2 13.9 -6.9 81 81 A S S S+ 0 0 90 -2,-0.4 -1,-0.2 1,-0.2 2,-0.2 0.239 130.4 61.8 -76.8 13.3 -12.5 12.5 -9.7 82 82 A I + 0 0 98 -3,-0.2 2,-0.8 -74,-0.2 -74,-0.2 -0.691 58.7 166.3-145.8 79.6 -9.5 10.7 -11.5 83 83 A V E +A 7 0A 7 -76,-1.4 -76,-2.3 -2,-0.2 2,-0.6 -0.846 9.9 177.7-105.8 98.8 -7.9 8.0 -9.2 84 84 A R E -A 6 0A 110 -2,-0.8 -24,-2.1 -78,-0.2 2,-0.6 -0.885 11.2-161.4-113.6 106.7 -5.6 5.9 -11.5 85 85 A L E -A 5 0A 1 -80,-1.5 -80,-1.7 -2,-0.6 2,-1.4 -0.769 10.2-150.1 -96.4 118.1 -3.6 3.1 -9.7 86 86 A Y E +A 4 0A 67 -2,-0.6 -29,-2.3 -82,-0.2 2,-1.0 -0.656 22.2 177.0 -86.1 85.3 -0.6 1.6 -11.6 87 87 A V E -AD 3 56A 4 -84,-2.0 -84,-0.8 -2,-1.4 2,-0.3 -0.789 26.8-138.5 -92.8 96.1 -0.6 -1.9 -10.0 88 88 A M - 0 0 61 -2,-1.0 -86,-0.3 -33,-0.6 -33,-0.2 -0.442 26.6-114.6 -61.2 115.3 2.3 -3.7 -12.0 89 89 A R - 0 0 144 -2,-0.3 -1,-0.1 1,-0.1 -35,-0.0 -0.371 46.9 -83.7 -59.8 123.8 0.8 -7.2 -12.7 90 90 A R S S+ 0 0 222 1,-0.1 -1,-0.1 -2,-0.1 -3,-0.0 0.078 77.4 130.9 -43.7 126.0 2.9 -9.8 -10.7 91 91 A K + 0 0 89 1,-0.2 -1,-0.1 -3,-0.1 -2,-0.0 0.486 36.2 88.3-148.5 -64.0 6.1 -10.7 -12.8 92 92 A P 0 0 98 0, 0.0 -1,-0.2 0, 0.0 -2,-0.0 -0.328 360.0 360.0 -55.7 124.1 9.5 -10.6 -10.7 93 93 A P 0 0 190 0, 0.0 -2,-0.0 0, 0.0 -3,-0.0 -0.104 360.0 360.0 -54.4 360.0 10.1 -14.1 -9.0