==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=24-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA/ANTIBIOTIC 06-SEP-02 1MNV . COMPND 2 MOLECULE: 5'-D(*AP*TP*GP*CP*TP*GP*CP*AP*T)-3'; . SOURCE 2 SYNTHETIC: YES; . AUTHOR M.-H.HOU,H.ROBINSON,Y.-G.GAO,A.H.-J.WANG . 20 4 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1904.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 4 20.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 4 20.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 C T 0 0 80 0, 0.0 3,-0.3 0, 0.0 7,-0.2 0.000 360.0 360.0 360.0 174.6 15.1 -0.6 6.0 2 2 C X B -A 8 0A 83 6,-2.3 6,-1.6 3,-0.4 2,-0.1 -0.453 360.0 -71.7 63.7-120.3 14.2 -3.0 3.2 3 3 C P S S+ 0 0 106 0, 0.0 -1,-0.3 0, 0.0 2,-0.1 0.297 131.1 30.9 -95.1 150.7 12.1 -4.5 4.4 4 4 C X 0 0 64 -3,-0.3 -2,-0.0 -2,-0.1 4,-0.0 0.588 360.0 360.0-107.8-169.6 13.8 -5.9 6.2 5 5 C X 0 0 177 -4,-0.2 -3,-0.4 -2,-0.1 0, 0.0 0.844 360.0 360.0 38.6 360.0 17.1 -4.5 7.6 6 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 7 7 C T 0 0 77 0, 0.0 4,-0.3 0, 0.0 3,-0.3 0.000 360.0 360.0 360.0 170.7 10.9 0.3 4.2 8 8 C X B -A 2 0A 82 -6,-1.6 -6,-2.3 3,-0.3 2,-0.1 -0.362 360.0 -69.1 57.6-125.5 13.7 1.8 2.0 9 9 C P S S+ 0 0 106 0, 0.0 -1,-0.3 0, 0.0 2,-0.1 0.240 132.6 32.7 -87.2 146.2 15.0 3.8 3.7 10 10 C X 0 0 34 -3,-0.3 -2,-0.2 -2,-0.1 -8,-0.0 0.652 360.0 360.0-112.4-174.5 12.7 5.5 3.5 11 11 C X 0 0 142 -4,-0.3 -3,-0.3 -3,-0.1 0, 0.0 0.852 360.0 360.0 40.2 360.0 9.0 4.5 3.3 12 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 13 1 D T 0 0 76 0, 0.0 3,-0.3 0, 0.0 7,-0.2 0.000 360.0 360.0 360.0 177.6 7.6 17.2 7.9 14 2 D X B -B 20 0B 92 6,-1.7 6,-1.4 3,-0.4 2,-0.1 -0.352 360.0 -69.4 56.4-117.5 7.4 19.5 4.8 15 3 D P S S+ 0 0 101 0, 0.0 -1,-0.3 0, 0.0 2,-0.1 0.360 130.0 39.2 -84.3 155.0 9.7 21.1 5.3 16 4 D X 0 0 62 -3,-0.3 -2,-0.1 -2,-0.1 4,-0.0 0.590 360.0 360.0-113.2-169.1 8.7 22.5 7.6 17 5 D X 0 0 180 -4,-0.2 -3,-0.4 -2,-0.1 0, 0.0 0.910 360.0 360.0 37.8 360.0 6.5 21.1 10.5 18 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 19 7 D T 0 0 75 0, 0.0 4,-0.3 0, 0.0 3,-0.3 0.000 360.0 360.0 360.0-178.0 10.9 16.5 4.9 20 8 D X B -B 14 0B 86 -6,-1.4 -6,-1.7 3,-0.4 2,-0.1 -0.291 360.0 -67.1 54.2-134.5 7.7 14.4 4.2 21 9 D P S S+ 0 0 110 0, 0.0 -1,-0.3 0, 0.0 2,-0.1 -0.014 132.3 22.4 -99.6 138.6 7.4 12.5 6.4 22 10 D X 0 0 32 -3,-0.3 -2,-0.2 -2,-0.1 -8,-0.0 0.630 360.0 360.0-113.6-164.2 9.7 11.2 5.5 23 11 D X 0 0 139 -4,-0.3 -3,-0.4 -3,-0.1 0, 0.0 0.842 360.0 360.0 60.5 360.0 12.7 12.3 3.4