==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=8-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL PROTEIN 11-DEC-02 1NEG . COMPND 2 MOLECULE: SPECTRIN ALPHA CHAIN, BRAIN; . SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; . AUTHOR U.MUELLER,K.BUESSOW,A.DIEHL,F.H.NIESEN,L.NYARSIK,U.HEINEMANN . 65 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4751.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 60.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 3.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 22 33.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 12.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 9.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 6 A K 0 0 192 0, 0.0 2,-0.3 0, 0.0 28,-0.1 0.000 360.0 360.0 360.0 134.9 25.6 1.5 10.5 2 7 A E - 0 0 90 26,-0.5 26,-2.7 55,-0.0 2,-0.3 -0.650 360.0-164.5 -97.7 148.2 26.7 4.1 13.0 3 8 A L E -A 27 0A 62 53,-0.4 53,-2.8 -2,-0.3 2,-0.3 -0.930 3.5-166.0-129.0 150.5 25.2 7.5 13.8 4 9 A V E -AB 26 55A 0 22,-2.0 22,-3.0 -2,-0.3 2,-0.4 -0.970 16.5-133.7-135.3 151.1 26.3 10.6 15.6 5 10 A L E -AB 25 54A 21 49,-2.4 49,-1.6 -2,-0.3 2,-0.6 -0.868 21.3-125.3-105.2 132.8 24.5 13.7 16.8 6 11 A A E - B 0 53A 0 18,-2.4 17,-2.6 -2,-0.4 47,-0.3 -0.717 19.6-168.5 -80.7 118.7 25.8 17.1 16.2 7 12 A L S S+ 0 0 38 45,-3.5 2,-0.3 -2,-0.6 -1,-0.2 0.726 72.6 4.9 -77.8 -24.0 26.0 18.8 19.6 8 13 A Y S S- 0 0 117 44,-0.8 -1,-0.1 13,-0.1 2,-0.1 -0.942 89.5 -84.7-151.1 166.9 26.7 22.2 17.9 9 14 A D - 0 0 77 -2,-0.3 2,-0.4 12,-0.1 12,-0.2 -0.455 41.9-166.4 -73.5 152.7 26.9 23.8 14.5 10 15 A Y B -F 20 0B 14 10,-2.8 10,-2.3 -2,-0.1 2,-0.6 -0.967 11.3-152.1-145.6 127.4 30.2 23.5 12.8 11 16 A Q - 0 0 137 -2,-0.4 8,-0.1 8,-0.2 7,-0.1 -0.873 30.5-114.7-101.2 121.4 31.4 25.4 9.7 12 17 A E - 0 0 55 -2,-0.6 7,-0.1 1,-0.1 36,-0.1 -0.250 21.6-163.1 -54.8 135.6 34.0 23.5 7.6 13 18 A K S S+ 0 0 162 1,-0.2 -1,-0.1 5,-0.1 6,-0.0 0.503 71.3 7.1 -99.3 -6.5 37.3 25.3 7.6 14 19 A S S > S- 0 0 44 4,-0.0 3,-2.5 1,-0.0 -1,-0.2 -0.974 87.2 -88.7-165.5 163.1 38.7 23.5 4.5 15 20 A P T 3 S+ 0 0 127 0, 0.0 -3,-0.0 0, 0.0 -1,-0.0 0.638 119.9 61.4 -54.9 -19.6 37.6 21.0 1.7 16 21 A R T 3 S+ 0 0 160 30,-0.1 31,-2.0 2,-0.0 2,-0.2 0.645 100.8 69.3 -84.3 -7.4 38.5 18.0 3.8 17 22 A E B < S-c 47 0A 12 -3,-2.5 2,-0.3 29,-0.3 31,-0.2 -0.518 70.8-143.4-103.5 167.4 35.9 19.1 6.4 18 23 A V - 0 0 1 29,-1.4 2,-0.3 -2,-0.2 -5,-0.1 -0.921 15.0-120.9-129.5 157.9 32.1 19.2 6.3 19 24 A T + 0 0 38 -2,-0.3 2,-0.3 -8,-0.1 -8,-0.2 -0.747 31.0 179.2 -97.9 144.1 29.5 21.6 7.7 20 25 A M B -F 10 0B 4 -10,-2.3 -10,-2.8 -2,-0.3 2,-0.3 -0.986 20.7-133.8-144.4 153.6 26.8 20.5 10.1 21 26 A K > - 0 0 119 -2,-0.3 3,-2.4 -12,-0.2 -15,-0.3 -0.820 40.3 -91.2-106.9 147.0 23.9 22.1 12.0 22 27 A K T 3 S+ 0 0 107 -2,-0.3 -15,-0.2 1,-0.3 -13,-0.1 -0.259 116.4 28.7 -52.4 136.4 23.2 21.5 15.7 23 28 A G T 3 S+ 0 0 36 -17,-2.6 -1,-0.3 1,-0.3 -16,-0.1 0.406 86.0 142.9 90.3 -5.4 20.8 18.6 15.9 24 29 A D < - 0 0 52 -3,-2.4 -18,-2.4 -16,-0.1 2,-0.7 -0.442 44.3-145.0 -70.6 144.5 22.0 16.9 12.7 25 30 A I E -A 5 0A 97 -20,-0.2 2,-0.3 -2,-0.1 -20,-0.2 -0.947 26.9-170.6-107.7 109.3 22.1 13.1 12.7 26 31 A L E -A 4 0A 0 -22,-3.0 -22,-2.0 -2,-0.7 2,-0.5 -0.760 27.8-113.8-107.8 152.8 25.1 12.1 10.6 27 32 A T E -AD 3 40A 22 13,-1.6 13,-1.9 -2,-0.3 2,-0.7 -0.697 33.7-133.6 -78.9 122.9 26.2 8.8 9.3 28 33 A L E + D 0 39A 10 -26,-2.7 -26,-0.5 -2,-0.5 11,-0.2 -0.694 31.7 169.9 -82.4 113.7 29.5 7.9 11.1 29 34 A L E + 0 0 76 9,-2.3 2,-0.3 -2,-0.7 10,-0.2 0.850 67.1 6.0 -91.6 -36.9 32.1 6.7 8.5 30 35 A N E + D 0 38A 71 8,-2.1 8,-2.6 1,-0.1 -1,-0.3 -0.924 47.3 162.2-154.6 124.7 35.3 6.7 10.7 31 36 A S + 0 0 48 -2,-0.3 6,-0.1 6,-0.2 -1,-0.1 0.077 47.2 112.0-125.9 21.9 36.0 7.3 14.3 32 37 A T + 0 0 126 2,-0.0 2,-0.3 4,-0.0 -1,-0.1 0.797 66.7 72.1 -68.3 -25.6 39.4 5.7 14.7 33 38 A N S S- 0 0 83 3,-0.4 -3,-0.0 1,-0.1 17,-0.0 -0.655 77.6-141.5 -88.7 143.9 41.1 9.1 15.3 34 39 A K S S+ 0 0 170 -2,-0.3 -1,-0.1 1,-0.1 3,-0.1 0.772 94.8 32.8 -80.5 -19.8 40.4 10.7 18.7 35 40 A D S S+ 0 0 86 1,-0.2 15,-3.3 15,-0.1 16,-0.5 0.797 118.2 40.9-102.2 -38.0 40.1 14.3 17.4 36 41 A W E - E 0 49A 81 13,-0.3 -3,-0.4 14,-0.1 2,-0.4 -0.960 62.0-167.6-121.9 124.3 38.6 14.2 13.9 37 42 A W E - E 0 48A 47 11,-2.8 11,-2.0 -2,-0.5 2,-0.5 -0.859 20.1-129.6-109.6 143.9 35.7 11.9 12.8 38 43 A K E +DE 30 47A 71 -8,-2.6 -9,-2.3 -2,-0.4 -8,-2.1 -0.810 37.7 168.7 -94.4 127.2 34.7 11.3 9.3 39 44 A V E -DE 28 46A 0 7,-2.7 7,-1.7 -2,-0.5 2,-0.5 -0.838 32.1-126.3-133.4 168.4 31.0 11.7 8.7 40 45 A E E +DE 27 45A 70 -13,-1.9 -13,-1.6 -2,-0.3 2,-0.4 -0.976 24.2 176.5-122.7 120.8 28.4 12.0 5.9 41 46 A V E > - E 0 44A 12 3,-3.4 3,-1.4 -2,-0.5 -22,-0.1 -0.990 68.7 -32.5-125.8 123.1 25.9 14.9 5.8 42 47 A N T 3 S- 0 0 121 -2,-0.4 -1,-0.1 1,-0.3 3,-0.1 0.845 127.9 -36.5 29.6 67.6 23.4 15.2 2.9 43 48 A D T 3 S+ 0 0 159 1,-0.2 2,-0.4 -3,-0.0 -1,-0.3 0.688 120.7 107.4 67.6 18.4 25.6 13.7 0.1 44 49 A R E < - E 0 41A 98 -3,-1.4 -3,-3.4 -25,-0.1 2,-0.3 -0.992 48.2-166.6-131.2 136.3 28.8 15.2 1.6 45 50 A Q E + E 0 40A 99 -2,-0.4 2,-0.3 -5,-0.2 -5,-0.2 -0.892 28.2 115.3-119.4 152.3 31.6 13.5 3.5 46 51 A G E - E 0 39A 3 -7,-1.7 -7,-2.7 -2,-0.3 -29,-0.3 -0.957 57.8 -68.7 169.7 179.7 34.4 15.1 5.5 47 52 A F E +cE 17 38A 62 -31,-2.0 -29,-1.4 -2,-0.3 -9,-0.2 -0.643 36.9 179.5 -97.6 152.5 35.9 15.4 9.0 48 53 A V E - E 0 37A 0 -11,-2.0 -11,-2.8 -2,-0.2 2,-0.1 -0.937 44.2 -82.9-141.5 157.8 34.4 17.2 12.0 49 54 A P E > - E 0 36A 18 0, 0.0 3,-1.2 0, 0.0 -13,-0.3 -0.455 29.7-137.5 -64.9 137.1 35.8 17.5 15.5 50 55 A A G > S+ 0 0 15 -15,-3.3 3,-1.2 1,-0.3 -14,-0.1 0.795 103.2 67.0 -62.5 -27.0 35.0 14.4 17.6 51 56 A A G 3 S+ 0 0 75 -16,-0.5 -1,-0.3 1,-0.2 -15,-0.1 0.748 94.0 57.6 -64.7 -26.3 34.2 16.9 20.4 52 57 A Y G < S+ 0 0 83 -3,-1.2 -45,-3.5 -45,-0.1 -44,-0.8 0.436 105.1 50.6 -86.5 -3.9 31.2 18.2 18.5 53 58 A V E < -B 6 0A 9 -3,-1.2 2,-0.4 -47,-0.3 -47,-0.2 -0.935 61.4-148.8-135.5 159.5 29.3 14.9 18.1 54 59 A K E -B 5 0A 132 -49,-1.6 -49,-2.4 -2,-0.3 2,-0.2 -0.991 26.0-121.7-125.8 133.5 28.1 12.0 20.2 55 60 A K E -B 4 0A 74 -2,-0.4 2,-0.9 -51,-0.2 -51,-0.3 -0.511 19.2-138.5 -72.6 142.5 27.7 8.5 18.9 56 61 A L - 0 0 33 -53,-2.8 -53,-0.4 -2,-0.2 -1,-0.1 -0.846 23.5-140.2-104.2 92.6 24.2 7.2 19.3 57 62 A A > - 0 0 30 -2,-0.9 3,-1.6 1,-0.1 5,-0.1 -0.251 6.8-136.5 -55.5 136.2 24.8 3.6 20.4 58 63 A A T 3 S+ 0 0 108 1,-0.3 -1,-0.1 3,-0.1 -56,-0.0 0.843 103.8 63.9 -61.8 -32.8 22.4 1.0 18.9 59 64 A A T 3 S+ 0 0 91 2,-0.0 2,-0.3 0, 0.0 -1,-0.3 0.542 98.9 67.2 -70.0 -8.3 22.1 -0.5 22.4 60 65 A W S < S- 0 0 191 -3,-1.6 2,-0.6 2,-0.0 0, 0.0 -0.898 74.1-132.5-122.3 148.8 20.5 2.6 23.7 61 66 A S - 0 0 116 -2,-0.3 -3,-0.1 1,-0.0 -4,-0.1 -0.843 33.4-142.1 -92.5 121.3 17.2 4.5 23.2 62 67 A H - 0 0 77 -2,-0.6 3,-0.1 -5,-0.1 -6,-0.0 -0.734 5.3-132.0 -96.3 125.9 18.0 8.2 22.8 63 68 A P - 0 0 117 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.113 42.7 -81.9 -62.8 166.0 15.9 11.0 24.2 64 69 A Q 0 0 184 1,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.560 360.0 360.0 -72.8 131.9 14.9 13.9 22.0 65 70 A F 0 0 121 -2,-0.3 -1,-0.1 -3,-0.1 -58,-0.0 -0.514 360.0 360.0 -80.2 360.0 17.8 16.4 21.9