==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=8-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL ADHESION 13-FEB-03 1NYP . COMPND 2 MOLECULE: PINCH PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.VELYVIS,J.VAYNBERG,O.VINOGRADOVA,Y.ZHANG,C.WU,J.QIN . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5039.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 30 45.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 18.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 7.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 12.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 133 0, 0.0 2,-0.1 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 54.0 4.8 29.3 1.6 2 2 A S - 0 0 120 1,-0.1 0, 0.0 2,-0.0 0, 0.0 -0.441 360.0 -83.9 -78.8 156.2 5.2 26.2 -0.7 3 3 A M + 0 0 191 -2,-0.1 -1,-0.1 1,-0.1 0, 0.0 0.017 44.9 177.8 -49.8 167.9 3.1 23.1 -0.1 4 4 A G + 0 0 76 1,-0.1 -1,-0.1 -3,-0.1 -2,-0.0 0.003 42.3 88.6-170.3 46.9 4.3 20.7 2.6 5 5 A V - 0 0 84 11,-0.0 -1,-0.1 2,-0.0 11,-0.1 -0.936 61.6-132.1-155.3 130.8 1.9 17.8 3.1 6 6 A P - 0 0 31 0, 0.0 9,-3.0 0, 0.0 2,-0.4 -0.276 20.2-141.4 -74.2 163.6 1.6 14.4 1.4 7 7 A I E -A 14 0A 71 7,-0.3 19,-0.5 -2,-0.0 2,-0.3 -0.966 16.8-119.7-135.4 119.8 -1.8 13.2 0.2 8 8 A C E >> -Ab 13 26A 0 5,-2.5 4,-2.5 -2,-0.4 5,-0.7 -0.364 15.0-146.8 -58.4 117.0 -3.0 9.6 0.5 9 9 A G T 45S+ 0 0 23 17,-3.4 -1,-0.2 -2,-0.3 18,-0.1 0.537 95.3 67.0 -64.8 -0.2 -3.6 8.4 -3.1 10 10 A A T 45S+ 0 0 52 16,-0.2 -1,-0.2 3,-0.1 17,-0.1 0.915 124.4 4.8 -86.7 -48.5 -6.4 6.4 -1.5 11 11 A C T 45S- 0 0 40 -3,-0.5 -2,-0.2 2,-0.2 -3,-0.1 0.311 94.5-123.3-116.1 4.8 -8.7 9.2 -0.4 12 12 A R T <5 + 0 0 187 -4,-2.5 -3,-0.2 1,-0.2 15,-0.0 0.921 65.6 142.6 53.5 41.3 -6.7 12.1 -2.0 13 13 A R E < -A 8 0A 162 -5,-0.7 -5,-2.5 1,-0.0 2,-0.3 -0.913 64.4 -95.5-115.9 143.4 -6.5 13.6 1.5 14 14 A P E -A 7 0A 75 0, 0.0 -7,-0.3 0, 0.0 -1,-0.0 -0.344 43.6-138.5 -56.5 113.4 -3.6 15.5 3.0 15 15 A I + 0 0 2 -9,-3.0 4,-0.1 -2,-0.3 13,-0.0 -0.326 24.3 179.3 -70.9 158.4 -1.7 12.8 5.0 16 16 A E + 0 0 173 2,-0.2 2,-0.1 -11,-0.1 -1,-0.1 -0.208 59.2 27.1-160.5 61.5 -0.4 13.9 8.4 17 17 A G S S+ 0 0 65 0, 0.0 2,-0.6 0, 0.0 -2,-0.0 -0.464 117.0 1.0-176.0-101.9 1.5 11.2 10.4 18 18 A R - 0 0 204 -2,-0.1 11,-1.3 2,-0.0 2,-0.2 -0.937 69.8-158.9-112.6 120.7 3.2 8.2 8.8 19 19 A V E -C 28 0B 47 -2,-0.6 2,-0.5 9,-0.2 9,-0.2 -0.651 9.3-144.6 -98.8 158.7 3.2 8.2 5.0 20 20 A V E -C 27 0B 25 7,-1.1 7,-1.3 -2,-0.2 2,-1.0 -0.963 9.8-150.5-122.6 116.0 3.7 5.2 2.7 21 21 A N + 0 0 119 -2,-0.5 2,-0.3 5,-0.2 5,-0.2 -0.737 40.9 135.8 -89.9 106.1 5.4 6.0 -0.6 22 22 A A > + 0 0 3 -2,-1.0 3,-2.9 3,-0.4 -2,-0.1 -0.968 57.6 25.1-144.5 159.5 4.1 3.5 -3.2 23 23 A M T 3 S- 0 0 52 -2,-0.3 3,-0.1 1,-0.3 -1,-0.1 0.770 130.7 -69.3 58.1 17.2 3.0 3.7 -6.8 24 24 A G T 3 S+ 0 0 80 1,-0.2 -1,-0.3 -3,-0.1 2,-0.2 0.806 123.1 88.2 70.2 25.3 5.3 6.7 -6.8 25 25 A K S < S- 0 0 125 -3,-2.9 -3,-0.4 -5,-0.1 2,-0.3 -0.439 81.1 -98.3-130.2-154.8 2.7 8.4 -4.6 26 26 A Q B -b 8 0A 72 -19,-0.5 -17,-3.4 -5,-0.2 2,-0.4 -0.985 32.1-172.1-135.4 143.5 1.9 8.7 -0.9 27 27 A W E -C 20 0B 47 -7,-1.3 -7,-1.1 -2,-0.3 5,-0.1 -0.995 34.1-103.2-141.6 140.0 -0.7 6.6 1.1 28 28 A H E >> -C 19 0B 38 -2,-0.4 4,-2.2 1,-0.2 3,-1.2 -0.348 35.0-124.8 -56.5 131.9 -2.1 6.7 4.6 29 29 A V T 34 S+ 0 0 35 -11,-1.3 -1,-0.2 1,-0.3 -10,-0.1 0.738 116.2 49.6 -53.2 -14.8 -0.3 3.9 6.5 30 30 A E T 34 S+ 0 0 88 1,-0.1 -1,-0.3 10,-0.1 12,-0.1 0.733 112.6 42.4 -95.8 -27.0 -4.0 2.9 7.1 31 31 A H T <4 S+ 0 0 81 -3,-1.2 2,-1.0 10,-0.1 -2,-0.2 0.566 86.5 99.8 -98.1 -6.5 -5.3 3.1 3.5 32 32 A F < + 0 0 9 -4,-2.2 9,-1.6 -5,-0.1 2,-0.3 -0.659 56.8 147.5 -80.2 106.3 -2.3 1.5 1.9 33 33 A V B -D 40 0C 31 -2,-1.0 20,-0.2 7,-0.2 -2,-0.1 -0.827 53.0 -69.4-133.6 175.3 -3.6 -2.0 1.4 34 34 A C > - 0 0 2 5,-0.9 4,-0.7 -2,-0.3 20,-0.3 -0.285 38.2-131.1 -62.8 148.7 -3.4 -5.0 -1.0 35 35 A A T 4 S+ 0 0 42 18,-3.6 19,-0.1 1,-0.2 -1,-0.1 0.058 102.9 43.6 -91.8 28.7 -5.0 -4.4 -4.4 36 36 A K T 4 S+ 0 0 122 3,-0.1 -1,-0.2 0, 0.0 18,-0.1 0.511 131.6 10.2-138.8 -31.7 -6.9 -7.8 -4.1 37 37 A C T 4 S- 0 0 52 2,-0.1 -2,-0.1 0, 0.0 17,-0.1 0.498 91.1-121.6-129.1 -15.4 -8.3 -8.0 -0.6 38 38 A E < + 0 0 150 -4,-0.7 -3,-0.1 1,-0.2 16,-0.0 0.940 48.6 163.7 71.7 47.6 -7.7 -4.5 0.9 39 39 A K - 0 0 101 2,-0.0 -5,-0.9 -8,-0.0 -1,-0.2 -0.870 31.5-138.5-101.5 109.6 -5.6 -5.7 3.8 40 40 A P B -D 33 0C 33 0, 0.0 2,-0.9 0, 0.0 3,-0.2 -0.416 2.4-143.3 -69.1 138.3 -3.7 -2.6 5.2 41 41 A F + 0 0 17 -9,-1.6 3,-0.4 1,-0.2 5,-0.1 -0.381 32.8 164.0 -95.8 56.9 -0.1 -3.1 6.2 42 42 A L S S- 0 0 88 -2,-0.9 -1,-0.2 1,-0.3 -11,-0.1 0.921 91.2 -9.5 -39.1 -55.2 -0.3 -0.8 9.3 43 43 A G S S+ 0 0 71 -3,-0.2 -1,-0.3 2,-0.1 2,-0.2 -0.037 123.0 94.1-135.2 31.0 3.0 -2.3 10.5 44 44 A H S S- 0 0 107 -3,-0.4 2,-0.3 1,-0.0 -3,-0.1 -0.611 78.4 -93.4-116.3 178.9 3.3 -5.2 8.1 45 45 A R - 0 0 188 -2,-0.2 11,-0.3 2,-0.0 2,-0.2 -0.715 37.0-156.8 -94.4 145.3 5.2 -5.7 4.7 46 46 A H - 0 0 61 -2,-0.3 2,-0.4 9,-0.1 9,-0.2 -0.708 5.2-140.5-116.3 169.5 3.4 -5.2 1.4 47 47 A Y E -E 54 0D 31 7,-1.1 7,-3.6 -2,-0.2 2,-0.3 -0.990 10.8-147.0-132.6 137.7 4.0 -6.4 -2.1 48 48 A E E +E 53 0D 92 -2,-0.4 2,-0.3 5,-0.3 5,-0.3 -0.804 16.5 176.2-107.0 148.3 3.7 -4.5 -5.4 49 49 A R E > -E 52 0D 47 3,-3.2 3,-1.0 -2,-0.3 -2,-0.0 -0.952 69.4 -15.1-152.0 129.3 2.6 -5.9 -8.8 50 50 A K T 3 S- 0 0 162 -2,-0.3 3,-0.1 1,-0.3 -2,-0.0 0.775 132.3 -50.5 51.2 22.9 2.1 -4.2 -12.2 51 51 A G T 3 S+ 0 0 45 1,-0.3 2,-0.3 0, 0.0 -1,-0.3 0.815 121.8 105.4 86.5 31.0 2.0 -1.0 -10.1 52 52 A L E < S-E 49 0D 76 -3,-1.0 -3,-3.2 2,-0.0 -1,-0.3 -1.000 70.2-115.0-143.3 142.7 -0.5 -2.3 -7.6 53 53 A A E +E 48 0D 5 -2,-0.3 -18,-3.6 -5,-0.3 2,-0.3 -0.435 33.9 177.0 -76.4 152.9 -0.1 -3.4 -4.0 54 54 A Y E -E 47 0D 13 -7,-3.6 -7,-1.1 -20,-0.3 -20,-0.1 -0.982 32.4-107.8-153.9 140.3 -0.8 -7.0 -3.1 55 55 A C > - 0 0 18 -2,-0.3 4,-2.1 -9,-0.2 5,-0.4 -0.024 47.3 -94.6 -57.6 177.5 -0.5 -9.0 0.2 56 56 A E H > S+ 0 0 115 -11,-0.3 4,-1.0 1,-0.2 -1,-0.1 0.879 127.4 35.7 -63.6 -36.0 2.4 -11.5 0.4 57 57 A T H > S+ 0 0 91 2,-0.2 4,-4.8 3,-0.2 5,-0.3 0.893 119.2 46.1 -86.7 -43.7 -0.1 -14.2 -0.7 58 58 A H H > S+ 0 0 59 2,-0.2 4,-3.7 3,-0.2 5,-0.3 0.961 112.4 52.5 -66.7 -43.8 -2.3 -12.3 -3.2 59 59 A Y H X S+ 0 0 35 -4,-2.1 4,-2.8 2,-0.2 5,-0.4 0.978 118.9 36.0 -51.7 -56.4 0.8 -10.8 -4.8 60 60 A N H < S+ 0 0 73 -4,-1.0 -2,-0.2 -5,-0.4 -1,-0.2 0.945 114.2 55.4 -64.5 -44.9 2.2 -14.3 -5.2 61 61 A Q H < S+ 0 0 152 -4,-4.8 -1,-0.2 1,-0.3 -2,-0.2 0.912 115.3 42.4 -54.4 -34.4 -1.3 -15.7 -5.9 62 62 A L H < S- 0 0 31 -4,-3.7 -2,-0.3 -5,-0.3 -1,-0.3 0.848 149.4 -45.8 -78.7 -35.2 -1.3 -13.1 -8.6 63 63 A F < - 0 0 96 -4,-2.8 -3,-0.2 -5,-0.3 -4,-0.1 0.050 48.7-159.4-158.6 -81.6 2.4 -13.8 -9.6 64 64 A G S S- 0 0 13 -5,-0.4 -4,-0.1 1,-0.1 -5,-0.1 0.808 72.0 -72.7 87.4 31.4 5.2 -14.2 -7.0 65 65 A D 0 0 137 -6,-0.2 -1,-0.1 1,-0.2 -5,-0.1 0.943 360.0 360.0 48.5 51.3 8.0 -13.4 -9.5 66 66 A V 0 0 173 -6,-0.1 -1,-0.2 0, 0.0 0, 0.0 -0.977 360.0 360.0-162.1 360.0 7.4 -16.8 -11.1