==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 14-DEC-06 2OA4 . COMPND 2 MOLECULE: SIR5; . SOURCE 2 ORGANISM_SCIENTIFIC: SILICIBACTER POMEROYI; . AUTHOR L.WANG,P.ROSSI,C.X.CHEN,C.NWOSU,K.CUNNINGHAM,L.-C.MA,R.XIAO, . 101 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8174.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 57.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 4 4.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 31.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 5 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 209 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 101.2 8.9 21.5 4.8 2 2 A M - 0 0 144 4,-0.0 2,-0.2 2,-0.0 4,-0.1 -0.716 360.0-145.7 -99.8 149.3 11.2 19.6 2.4 3 3 A F - 0 0 134 -2,-0.3 -1,-0.0 2,-0.2 0, 0.0 -0.592 22.7-120.4-106.5 169.7 11.6 15.9 2.2 4 4 A L S S+ 0 0 169 -2,-0.2 2,-0.8 1,-0.1 -1,-0.1 0.763 100.3 74.2 -79.6 -26.8 14.6 13.7 1.4 5 5 A R S S- 0 0 123 2,-0.1 2,-1.7 1,-0.0 -2,-0.2 -0.798 75.5-153.1 -90.1 108.1 12.7 12.2 -1.6 6 6 A K + 0 0 187 -2,-0.8 2,-0.5 -4,-0.1 3,-0.1 -0.620 36.8 152.0 -83.0 82.9 12.7 14.8 -4.3 7 7 A V + 0 0 75 -2,-1.7 -2,-0.1 1,-0.1 -4,-0.1 -0.972 23.4 90.7-122.5 125.3 9.5 13.8 -6.1 8 8 A E S S+ 0 0 118 -2,-0.5 -1,-0.1 4,-0.1 -2,-0.0 0.025 82.3 57.5-168.4 -49.6 7.1 16.0 -8.1 9 9 A G S S+ 0 0 59 1,-0.2 -2,-0.1 -3,-0.1 3,-0.0 0.929 102.9 55.3 -58.8 -52.4 8.4 15.9 -11.6 10 10 A P S S- 0 0 83 0, 0.0 2,-1.3 0, 0.0 -1,-0.2 0.877 79.9-175.4 -46.6 -44.4 8.1 12.0 -11.9 11 11 A R + 0 0 189 11,-0.0 12,-0.8 12,-0.0 2,-0.4 -0.002 58.6 61.0 72.2 -32.1 4.4 12.4 -10.9 12 12 A S E S-A 22 0A 37 -2,-1.3 2,-0.3 10,-0.2 10,-0.3 -0.957 70.6-144.5-130.2 145.2 4.1 8.6 -10.8 13 13 A V E -A 21 0A 30 8,-2.6 8,-2.5 -2,-0.4 2,-0.5 -0.747 16.2-130.5-102.5 152.2 5.7 5.8 -8.9 14 14 A T E -A 20 0A 82 -2,-0.3 6,-0.3 6,-0.2 5,-0.1 -0.917 18.5-137.8-103.8 127.2 6.5 2.4 -10.2 15 15 A L - 0 0 15 4,-2.6 4,-0.3 -2,-0.5 3,-0.2 -0.398 36.0 -96.3 -73.8 160.1 5.4 -0.6 -8.1 16 16 A P S S- 0 0 58 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.762 117.3 -10.1 -50.6 -28.4 7.9 -3.5 -7.7 17 17 A D S S+ 0 0 120 2,-0.1 -3,-0.0 0, 0.0 -2,-0.0 0.099 120.9 90.9-154.6 21.8 6.1 -5.2 -10.6 18 18 A G S S- 0 0 30 1,-0.4 -3,-0.1 -3,-0.2 26,-0.0 -0.076 79.9-125.6-125.7 34.6 3.1 -3.1 -11.0 19 19 A S - 0 0 86 -4,-0.3 -4,-2.6 -5,-0.1 2,-0.4 -0.021 53.7 -38.7 59.1-162.2 3.9 -0.4 -13.6 20 20 A I E +A 14 0A 104 -6,-0.3 2,-0.3 -8,-0.0 -6,-0.2 -0.796 54.6 177.7-102.1 140.8 3.5 3.3 -12.8 21 21 A M E -A 13 0A 27 -8,-2.5 -8,-2.6 -2,-0.4 2,-0.1 -0.989 17.9-135.7-138.4 148.7 0.6 4.9 -10.8 22 22 A T E > -A 12 0A 59 -2,-0.3 3,-0.6 -10,-0.3 -10,-0.2 -0.353 28.2-105.4 -98.2 178.4 0.0 8.5 -9.8 23 23 A R T 3 S+ 0 0 129 -12,-0.8 3,-0.1 1,-0.2 -11,-0.1 0.399 114.2 65.5 -81.3 2.7 -1.1 10.3 -6.7 24 24 A A T 3 S+ 0 0 92 1,-0.1 -1,-0.2 3,-0.0 -3,-0.0 0.697 90.9 57.9 -98.6 -23.3 -4.5 10.8 -8.3 25 25 A D S < S+ 0 0 75 -3,-0.6 -1,-0.1 2,-0.1 -2,-0.1 0.332 77.3 122.2 -92.4 8.2 -5.6 7.2 -8.6 26 26 A L S S- 0 0 16 -3,-0.1 5,-0.1 1,-0.1 16,-0.1 -0.577 71.8-118.6 -73.8 123.3 -5.3 6.7 -4.8 27 27 A P - 0 0 2 0, 0.0 2,-2.5 0, 0.0 -1,-0.1 -0.524 21.5-139.9 -60.3 111.5 -8.6 5.6 -3.1 28 28 A P - 0 0 81 0, 0.0 2,-2.4 0, 0.0 3,-0.1 -0.199 48.8 -91.5 -75.6 49.6 -9.2 8.5 -0.7 29 29 A A S S+ 0 0 37 -2,-2.5 31,-0.0 1,-0.2 30,-0.0 -0.174 126.0 60.2 71.5 -45.8 -10.4 6.0 2.0 30 30 A N + 0 0 133 -2,-2.4 -1,-0.2 32,-0.0 30,-0.0 0.989 69.5 144.5 -71.3 -74.1 -14.0 6.5 0.8 31 31 A T - 0 0 44 -3,-0.1 3,-0.1 -5,-0.1 -5,-0.0 -0.084 53.9-112.0 60.5-170.8 -13.8 5.2 -2.8 32 32 A R S S+ 0 0 245 1,-0.3 2,-0.5 0, 0.0 -1,-0.0 0.566 88.4 14.0-118.2 -73.9 -16.8 3.4 -4.3 33 33 A R - 0 0 217 2,-0.0 2,-1.2 5,-0.0 -1,-0.3 -0.936 65.8-146.1-112.2 121.9 -16.0 -0.3 -4.9 34 34 A W + 0 0 60 -2,-0.5 2,-0.2 -3,-0.1 -3,-0.0 -0.722 27.9 177.4 -85.2 93.8 -12.9 -1.8 -3.5 35 35 A V > - 0 0 83 -2,-1.2 4,-2.9 1,-0.1 5,-0.2 -0.515 45.0 -98.5 -90.8 167.5 -11.8 -4.4 -6.1 36 36 A A H > S+ 0 0 69 1,-0.2 4,-3.1 2,-0.2 5,-0.3 0.940 126.4 44.2 -49.8 -57.0 -8.7 -6.5 -5.8 37 37 A S H > S+ 0 0 94 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.849 114.0 53.0 -57.1 -34.3 -6.6 -4.2 -8.0 38 38 A R H > S+ 0 0 44 2,-0.2 4,-0.9 1,-0.2 -1,-0.2 0.913 113.2 41.7 -68.9 -43.4 -8.1 -1.2 -6.2 39 39 A K H >X S+ 0 0 67 -4,-2.9 4,-1.6 2,-0.2 3,-0.9 0.942 114.9 49.2 -68.6 -50.5 -7.1 -2.6 -2.8 40 40 A I H 3X S+ 0 0 39 -4,-3.1 4,-2.3 1,-0.3 5,-0.3 0.844 106.3 59.2 -58.7 -34.3 -3.6 -3.8 -3.9 41 41 A A H 3X S+ 0 0 8 -4,-1.8 4,-2.0 -5,-0.3 -1,-0.3 0.822 103.1 53.4 -64.6 -31.8 -3.1 -0.4 -5.4 42 42 A V H S+ 0 0 1 -4,-1.6 4,-1.7 1,-0.2 5,-0.5 0.893 121.8 42.7 -59.3 -42.8 -1.0 -0.8 -0.1 44 44 A R H X>S+ 0 0 47 -4,-2.3 4,-1.3 -5,-0.2 5,-0.6 0.884 117.6 48.1 -70.4 -37.1 1.5 -0.7 -2.9 45 45 A G H X>S+ 0 0 0 -4,-2.0 5,-1.6 -5,-0.3 4,-1.1 0.954 118.2 36.1 -69.4 -50.6 0.8 3.0 -3.6 46 46 A V H <>S+ 0 0 0 -4,-3.4 5,-1.0 3,-0.2 4,-0.4 0.957 125.1 37.5 -69.8 -49.5 1.0 4.3 -0.0 47 47 A I H <5S+ 0 0 20 -4,-1.7 -3,-0.2 -5,-0.4 -2,-0.2 0.903 129.9 27.8 -73.1 -44.6 3.8 2.1 1.3 48 48 A Y H < - 0 0 70 -2,-0.2 4,-2.5 1,-0.1 3,-0.4 -0.358 47.5-103.0 -86.1 171.1 4.6 5.6 6.0 53 53 A L H > S+ 0 0 52 1,-0.2 4,-1.0 2,-0.2 5,-0.2 0.630 116.7 70.4 -72.4 -12.1 2.0 3.4 7.5 54 54 A A H > S+ 0 0 48 2,-0.2 4,-1.6 3,-0.2 -1,-0.2 0.966 110.8 29.1 -65.3 -51.9 1.4 6.0 10.1 55 55 A E H >>S+ 0 0 93 -3,-0.4 4,-3.1 1,-0.2 5,-0.5 0.888 118.7 57.8 -73.8 -39.6 -0.2 8.4 7.6 56 56 A A H <5S+ 0 0 0 -4,-2.5 -1,-0.2 1,-0.2 -2,-0.2 0.690 109.9 45.9 -66.3 -18.5 -1.5 5.5 5.5 57 57 A K H X5S+ 0 0 113 -4,-1.0 4,-0.8 3,-0.2 -1,-0.2 0.835 114.2 45.6 -89.8 -38.5 -3.4 4.3 8.5 58 58 A Q H <5S+ 0 0 148 -4,-1.6 -2,-0.2 -5,-0.2 -3,-0.2 0.860 131.7 22.5 -71.7 -36.4 -4.8 7.6 9.5 59 59 A T T <5S+ 0 0 66 -4,-3.1 3,-0.4 -5,-0.1 -3,-0.2 0.899 144.3 16.4 -92.2 -57.5 -5.8 8.4 6.0 60 60 A Y T 4 S- 0 0 67 -3,-0.2 4,-2.7 1,-0.1 5,-0.2 -0.968 70.1-139.3-113.1 133.8 -10.2 -1.0 9.0 64 64 A D H > S+ 0 0 116 -2,-0.4 4,-2.0 1,-0.3 -1,-0.1 0.886 106.1 45.3 -60.8 -40.0 -6.9 -2.4 10.4 65 65 A E H > S+ 0 0 122 2,-0.2 4,-2.2 1,-0.2 -1,-0.3 0.859 111.1 55.3 -70.5 -33.6 -7.8 -6.0 9.6 66 66 A E H > S+ 0 0 59 2,-0.2 4,-1.1 1,-0.2 -2,-0.2 0.940 108.3 46.9 -61.8 -48.4 -9.0 -4.9 6.2 67 67 A F H >X S+ 0 0 10 -4,-2.7 4,-1.6 -6,-0.4 3,-0.5 0.895 111.5 52.4 -60.3 -41.5 -5.6 -3.3 5.4 68 68 A N H 3X S+ 0 0 79 -4,-2.0 4,-3.0 1,-0.2 -1,-0.2 0.876 102.2 59.3 -62.0 -38.9 -3.9 -6.5 6.7 69 69 A S H 3X S+ 0 0 65 -4,-2.2 4,-1.4 1,-0.2 -1,-0.2 0.802 103.4 52.4 -63.5 -28.9 -6.1 -8.6 4.4 70 70 A W H > - 0 0 9 1,-0.1 4,-3.9 -3,-0.1 3,-0.8 -0.587 68.1-128.8 -70.0 123.4 6.7 -9.9 2.1 85 85 A T H 3> S+ 0 0 75 -2,-0.4 4,-1.8 -11,-0.3 5,-0.2 0.835 103.4 40.3 -44.5 -54.4 7.9 -7.7 -0.7 86 86 A A H 3> S+ 0 0 17 1,-0.2 4,-1.4 2,-0.2 -1,-0.3 0.825 123.0 41.4 -67.9 -29.4 6.2 -4.5 0.3 87 87 A L H <> S+ 0 0 51 -3,-0.8 4,-1.2 2,-0.2 -2,-0.2 0.873 110.4 54.8 -89.5 -39.6 6.8 -5.0 4.0 88 88 A K H X S+ 0 0 77 -4,-3.9 4,-3.2 2,-0.2 5,-0.3 0.881 112.5 45.4 -60.5 -39.0 10.4 -6.3 3.7 89 89 A K H X S+ 0 0 94 -4,-1.8 4,-2.2 -5,-0.4 -1,-0.2 0.916 111.9 50.3 -72.3 -41.9 11.3 -3.1 1.8 90 90 A Y H < S+ 0 0 62 -4,-1.4 -1,-0.2 -5,-0.2 -2,-0.2 0.656 120.1 39.1 -69.4 -15.0 9.4 -0.9 4.3 91 91 A R H >< S+ 0 0 125 -4,-1.2 3,-0.5 -9,-0.1 4,-0.4 0.836 117.8 43.7-100.0 -44.8 11.3 -2.6 7.0 92 92 A Q H >< S+ 0 0 107 -4,-3.2 3,-1.8 1,-0.2 -3,-0.2 0.862 103.2 66.1 -70.6 -36.3 14.8 -3.0 5.6 93 93 A L T 3< S+ 0 0 88 -4,-2.2 -1,-0.2 1,-0.3 -3,-0.1 0.768 91.6 63.9 -59.5 -27.7 15.0 0.5 4.1 94 94 A L T < S+ 0 0 93 -3,-0.5 2,-1.1 1,-0.2 -1,-0.3 0.765 92.4 68.2 -69.5 -23.9 15.0 1.9 7.6 95 95 A E S < S- 0 0 120 -3,-1.8 -1,-0.2 -4,-0.4 -4,-0.0 -0.739 129.0 -28.0 -99.7 86.7 18.3 0.2 8.3 96 96 A H - 0 0 180 -2,-1.1 -1,-0.3 -3,-0.0 3,-0.1 0.888 61.9-152.3 68.9 103.1 20.7 2.2 5.9 97 97 A H - 0 0 120 1,-0.2 2,-0.2 -3,-0.2 -2,-0.1 0.998 56.1 -70.3 -64.5 -67.5 18.8 3.6 2.9 98 98 A H - 0 0 177 2,-0.0 -1,-0.2 -5,-0.0 2,-0.2 -0.824 39.8-109.9-161.9-160.6 21.8 3.6 0.5 99 99 A H - 0 0 162 -2,-0.2 2,-0.4 -3,-0.1 0, 0.0 -0.745 22.8-142.2-154.8 108.1 25.1 5.4 -0.0 100 100 A H 0 0 184 -2,-0.2 -2,-0.0 0, 0.0 0, 0.0 -0.536 360.0 360.0 -74.1 123.9 25.5 7.8 -3.0 101 101 A H 0 0 219 -2,-0.4 -2,-0.1 0, 0.0 0, 0.0 -1.000 360.0 360.0-135.4 360.0 29.0 7.7 -4.5