==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=3-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN/RNA 14-MAY-07 2PXE . COMPND 2 MOLECULE: SIGNAL RECOGNITION PARTICLE PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR A.Y.KEEL,R.P.RAMBO,R.T.BATEY,J.S.KIEFT . 69 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4716.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 51 73.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 14.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 37 53.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A F 0 0 88 0, 0.0 2,-0.2 0, 0.0 63,-0.0 0.000 360.0 360.0 360.0 129.3 32.7 34.3 28.6 2 2 A D > - 0 0 25 28,-0.1 4,-1.9 29,-0.0 3,-0.5 -0.766 360.0 -71.6-143.7-171.4 32.3 30.6 28.4 3 3 A L H > S+ 0 0 0 25,-2.1 4,-3.1 1,-0.3 5,-0.2 0.804 125.6 60.7 -58.3 -30.0 33.9 27.2 28.4 4 4 A N H > S+ 0 0 46 24,-0.4 4,-1.3 1,-0.2 -1,-0.3 0.939 109.9 41.2 -61.8 -44.8 35.1 27.9 24.8 5 5 A D H 4 S+ 0 0 70 -3,-0.5 -2,-0.2 2,-0.2 -1,-0.2 0.755 115.2 50.9 -73.7 -26.0 37.0 30.9 26.2 6 6 A F H >< S+ 0 0 24 -4,-1.9 3,-1.5 1,-0.2 -2,-0.2 0.879 107.3 53.6 -77.2 -38.8 38.2 28.9 29.2 7 7 A L H 3< S+ 0 0 37 -4,-3.1 -2,-0.2 1,-0.3 -1,-0.2 0.839 98.3 66.3 -62.3 -32.4 39.4 26.1 26.9 8 8 A E T 3< 0 0 147 -4,-1.3 -1,-0.3 -5,-0.2 -2,-0.1 0.242 360.0 360.0 -75.4 14.6 41.4 28.7 25.1 9 9 A Q < 0 0 156 -3,-1.5 -3,-0.0 0, 0.0 0, 0.0 -0.878 360.0 360.0-137.0 360.0 43.6 29.2 28.1 10 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 11 23 A K >> 0 0 118 0, 0.0 4,-1.8 0, 0.0 3,-1.5 0.000 360.0 360.0 360.0 -45.1 49.0 17.4 32.6 12 24 A V H 3> + 0 0 84 1,-0.3 4,-1.6 2,-0.2 5,-0.1 0.855 360.0 54.8 -52.0 -29.8 46.3 18.8 34.8 13 25 A L H 3> S+ 0 0 60 2,-0.2 4,-1.8 1,-0.2 -1,-0.3 0.791 101.2 57.0 -74.8 -27.4 45.7 20.9 31.7 14 26 A V H <> S+ 0 0 61 -3,-1.5 4,-2.6 2,-0.2 -2,-0.2 0.939 107.7 45.2 -69.9 -46.6 45.3 17.8 29.5 15 27 A R H X S+ 0 0 37 -4,-1.8 4,-2.4 2,-0.2 5,-0.2 0.932 108.6 57.4 -62.6 -46.2 42.5 16.3 31.5 16 28 A X H X S+ 0 0 52 -4,-1.6 4,-2.0 -5,-0.3 3,-0.4 0.943 108.9 45.4 -49.8 -51.8 40.7 19.6 31.8 17 29 A E H X S+ 0 0 98 -4,-1.8 4,-3.0 1,-0.2 3,-0.4 0.961 108.0 59.2 -54.8 -50.6 40.6 19.8 28.0 18 30 A A H < S+ 0 0 30 -4,-2.6 -1,-0.2 1,-0.3 -2,-0.2 0.847 105.5 48.8 -46.0 -42.3 39.5 16.2 28.0 19 31 A I H >< S+ 0 0 6 -4,-2.4 3,-1.0 -3,-0.4 -1,-0.3 0.903 113.6 45.6 -68.0 -40.1 36.5 17.1 30.0 20 32 A I H >< S+ 0 0 2 -4,-2.0 3,-1.4 -3,-0.4 -2,-0.2 0.838 103.5 63.1 -74.2 -29.1 35.6 20.0 27.7 21 33 A N T 3< S+ 0 0 91 -4,-3.0 -1,-0.2 1,-0.2 -2,-0.2 0.504 100.2 56.5 -72.7 -0.4 36.1 17.9 24.6 22 34 A S T < S+ 0 0 34 -3,-1.0 -1,-0.2 -5,-0.3 -2,-0.2 0.462 90.0 89.9-106.8 -2.9 33.3 15.7 25.7 23 35 A X S < S- 0 0 10 -3,-1.4 2,-0.1 -4,-0.2 -3,-0.0 -0.460 77.1-115.0 -89.5 165.4 30.6 18.4 26.0 24 36 A T > - 0 0 60 -2,-0.1 4,-2.1 1,-0.1 5,-0.2 -0.445 33.6-102.5 -90.0 170.4 28.3 19.6 23.2 25 37 A X H > S+ 0 0 137 1,-0.2 4,-2.3 2,-0.2 5,-0.3 0.943 123.3 54.0 -59.7 -44.7 28.5 23.1 21.8 26 38 A K H > S+ 0 0 163 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.866 107.5 50.4 -57.3 -39.2 25.4 24.1 23.8 27 39 A E H 4 S+ 0 0 0 2,-0.2 6,-0.2 1,-0.2 -1,-0.2 0.945 110.2 48.5 -66.4 -47.3 27.1 22.9 27.1 28 40 A R H < S+ 0 0 43 -4,-2.1 -25,-2.1 1,-0.2 -24,-0.4 0.900 116.4 43.2 -58.8 -43.0 30.3 24.9 26.4 29 41 A A H < S+ 0 0 55 -4,-2.3 -1,-0.2 1,-0.3 -2,-0.2 0.813 128.6 26.9 -74.0 -33.4 28.4 28.1 25.6 30 42 A K S >< S+ 0 0 111 -4,-2.0 3,-1.7 -5,-0.3 -1,-0.3 -0.566 70.6 173.1-133.9 70.0 25.9 27.8 28.4 31 43 A P G > + 0 0 12 0, 0.0 3,-2.5 0, 0.0 -1,-0.1 0.702 66.6 77.5 -46.5 -35.0 27.6 25.8 31.2 32 44 A E G 3 S+ 0 0 124 1,-0.3 -5,-0.1 -5,-0.0 -2,-0.0 0.544 83.2 67.0 -62.0 -5.1 24.8 26.3 33.7 33 45 A I G < S+ 0 0 41 -3,-1.7 2,-1.1 -6,-0.2 -1,-0.3 0.552 73.4 105.5 -90.0 -9.4 22.8 23.7 31.9 34 46 A I < + 0 0 8 -3,-2.5 2,-0.1 -7,-0.2 -1,-0.0 -0.628 47.1 147.6 -78.8 101.8 25.2 21.0 33.0 35 47 A K > - 0 0 137 -2,-1.1 4,-2.7 0, 0.0 5,-0.3 -0.311 60.0 -50.0-115.4-162.2 23.5 19.0 35.7 36 48 A G H > S+ 0 0 45 1,-0.2 4,-2.0 2,-0.2 5,-0.2 0.862 128.6 42.5 -39.6 -64.4 23.4 15.4 36.9 37 49 A S H > S+ 0 0 80 1,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.844 118.9 43.6 -59.4 -39.6 22.8 13.5 33.7 38 50 A R H > S+ 0 0 96 -3,-0.3 4,-4.1 2,-0.2 5,-0.3 0.935 108.6 55.5 -74.4 -46.7 25.2 15.5 31.6 39 51 A K H X S+ 0 0 56 -4,-2.7 4,-3.3 1,-0.3 -2,-0.2 0.929 111.7 47.9 -49.0 -45.7 28.1 15.6 34.1 40 52 A R H X S+ 0 0 146 -4,-2.0 4,-2.2 -5,-0.3 5,-0.4 0.913 111.4 47.9 -63.0 -43.4 27.8 11.9 34.1 41 53 A R H X S+ 0 0 103 -4,-1.7 4,-2.0 1,-0.2 -2,-0.2 0.935 116.1 46.1 -63.2 -42.3 27.7 11.7 30.3 42 54 A I H X S+ 0 0 0 -4,-4.1 4,-0.8 2,-0.2 -2,-0.2 0.877 111.8 49.8 -67.5 -40.4 30.7 14.1 30.3 43 55 A A H ><>S+ 0 0 3 -4,-3.3 5,-3.0 -5,-0.3 3,-1.1 0.974 115.3 41.0 -65.1 -54.3 32.7 12.2 33.0 44 56 A A H ><5S+ 0 0 81 -4,-2.2 3,-1.3 1,-0.3 -2,-0.2 0.920 112.9 56.5 -60.2 -40.9 32.4 8.8 31.4 45 57 A G H 3<5S+ 0 0 54 -4,-2.0 -1,-0.3 -5,-0.4 -2,-0.2 0.693 115.5 36.8 -64.9 -17.3 32.9 10.2 28.0 46 58 A S T <<5S- 0 0 17 -3,-1.1 -1,-0.3 -4,-0.8 -2,-0.2 0.247 113.2-111.6-116.5 9.1 36.2 11.7 29.1 47 59 A G T < 5S+ 0 0 62 -3,-1.3 2,-0.2 -4,-0.5 -3,-0.2 0.816 79.6 122.6 64.5 31.0 37.4 8.9 31.4 48 60 A X < - 0 0 50 -5,-3.0 2,-0.3 -6,-0.2 -1,-0.2 -0.725 65.0-107.2-119.7 169.3 36.9 11.2 34.4 49 61 A Q >> - 0 0 119 -2,-0.2 4,-1.7 1,-0.1 3,-1.2 -0.654 30.8-115.3 -95.2 152.7 34.9 11.1 37.6 50 62 A V H 3> S+ 0 0 53 1,-0.3 4,-2.3 -2,-0.3 3,-0.3 0.910 119.2 55.4 -52.6 -44.0 31.8 13.3 38.1 51 63 A Q H 3> S+ 0 0 138 1,-0.3 4,-2.0 2,-0.2 -1,-0.3 0.785 101.9 58.5 -61.9 -25.6 33.7 15.2 40.9 52 64 A D H <> S+ 0 0 66 -3,-1.2 4,-2.0 2,-0.2 -1,-0.3 0.929 108.2 45.2 -66.8 -42.8 36.4 15.8 38.3 53 65 A V H X S+ 0 0 0 -4,-1.7 4,-2.5 -3,-0.3 -2,-0.2 0.849 109.1 56.5 -67.9 -34.4 33.8 17.6 36.2 54 66 A N H X S+ 0 0 59 -4,-2.3 4,-1.8 2,-0.2 -1,-0.2 0.918 107.9 47.1 -64.8 -42.1 32.5 19.4 39.2 55 67 A R H X S+ 0 0 53 -4,-2.0 4,-2.8 2,-0.2 5,-0.2 0.931 110.8 52.8 -64.8 -43.0 35.9 20.9 40.0 56 68 A L H X S+ 0 0 3 -4,-2.0 4,-2.2 1,-0.2 -2,-0.2 0.936 109.8 47.4 -55.7 -51.2 36.4 21.8 36.3 57 69 A L H X S+ 0 0 22 -4,-2.5 4,-2.6 1,-0.2 -1,-0.2 0.832 111.2 52.5 -61.7 -33.3 33.1 23.7 36.3 58 70 A K H X S+ 0 0 108 -4,-1.8 4,-2.7 2,-0.2 -2,-0.2 0.933 107.6 49.4 -68.5 -47.3 34.0 25.4 39.5 59 71 A Q H X S+ 0 0 97 -4,-2.8 4,-1.6 1,-0.2 -2,-0.2 0.895 114.0 48.0 -59.4 -37.3 37.3 26.7 38.2 60 72 A F H X S+ 0 0 13 -4,-2.2 4,-3.0 -5,-0.2 -2,-0.2 0.933 108.8 52.7 -66.7 -46.5 35.4 27.9 35.2 61 73 A D H X S+ 0 0 76 -4,-2.6 4,-2.2 1,-0.2 -2,-0.2 0.944 105.7 54.6 -51.3 -54.9 32.8 29.6 37.3 62 74 A D H X S+ 0 0 57 -4,-2.7 4,-1.3 1,-0.2 -1,-0.2 0.896 113.0 42.7 -47.1 -49.3 35.4 31.5 39.3 63 75 A X H X S+ 0 0 44 -4,-1.6 4,-2.2 1,-0.2 -1,-0.2 0.896 107.7 57.9 -67.8 -41.9 36.9 32.9 36.1 64 76 A Q H < S+ 0 0 29 -4,-3.0 -1,-0.2 1,-0.2 -2,-0.2 0.864 105.3 54.2 -55.6 -35.0 33.5 33.7 34.6 65 77 A R H X S+ 0 0 156 -4,-2.2 4,-0.7 -5,-0.2 -1,-0.2 0.900 104.2 53.8 -64.8 -42.9 33.0 35.8 37.7 66 78 A X H >< S+ 0 0 84 -4,-1.3 3,-2.5 -5,-0.2 2,-1.0 0.950 87.9 85.6 -58.7 -48.0 36.2 37.7 37.0 67 79 A X T 3< S+ 0 0 93 -4,-2.2 -1,-0.1 1,-0.3 -4,-0.0 -0.384 105.5 19.1 -62.6 97.4 35.0 38.5 33.5 68 80 A K T 34 S+ 0 0 110 -2,-1.0 -1,-0.3 0, 0.0 -2,-0.2 -0.196 132.8 46.9 129.7 -29.4 33.0 41.7 34.3 69 81 A K << 0 0 188 -3,-2.5 -2,-0.2 -4,-0.7 -3,-0.1 -0.202 360.0 360.0-127.4 39.2 34.8 42.2 37.7 70 82 A X 0 0 188 -4,-0.2 -1,-0.2 -5,-0.0 -4,-0.0 -0.240 360.0 360.0-168.1 360.0 38.4 41.7 36.5