==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=3-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN/RNA 14-MAY-07 2PXL . COMPND 2 MOLECULE: SIGNAL RECOGNITION PARTICLE PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR A.Y.KEEL,R.P.RAMBO,R.T.BATEY,J.S.KIEFT . 69 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4789.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 51 73.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 14.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 36 52.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A F 0 0 92 0, 0.0 2,-0.1 0, 0.0 67,-0.1 0.000 360.0 360.0 360.0 105.6 -89.6 -18.7 20.9 2 2 A D > - 0 0 35 28,-0.0 4,-1.4 29,-0.0 27,-0.2 -0.404 360.0 -76.0-111.4-170.8 -91.2 -15.3 21.0 3 3 A L T 4 S+ 0 0 0 25,-2.1 4,-0.4 1,-0.2 26,-0.1 0.571 121.8 69.0 -65.6 -6.7 -89.8 -11.7 21.0 4 4 A N T >> S+ 0 0 37 24,-0.5 3,-1.6 2,-0.2 4,-1.1 0.984 100.2 38.8 -76.0 -62.0 -88.9 -12.3 24.6 5 5 A D H >> S+ 0 0 77 1,-0.3 4,-1.5 2,-0.2 3,-0.9 0.901 114.0 58.2 -54.3 -40.7 -86.1 -14.8 24.4 6 6 A F H 3< S+ 0 0 21 -4,-1.4 -1,-0.3 1,-0.3 -2,-0.2 0.762 99.6 60.4 -60.3 -24.2 -84.9 -12.9 21.3 7 7 A L H <4 S+ 0 0 35 -3,-1.6 -1,-0.3 -4,-0.4 -2,-0.2 0.847 102.0 49.9 -72.7 -34.7 -84.7 -9.9 23.7 8 8 A E H << 0 0 163 -4,-1.1 -2,-0.2 -3,-0.9 -1,-0.2 0.804 360.0 360.0 -72.9 -29.4 -82.2 -11.6 25.9 9 9 A Q < 0 0 139 -4,-1.5 -3,-0.1 0, 0.0 -2,-0.1 0.596 360.0 360.0 -77.3 360.0 -80.1 -12.5 22.8 10 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 11 23 A K 0 0 135 0, 0.0 4,-0.5 0, 0.0 3,-0.4 0.000 360.0 360.0 360.0 16.7 -74.5 -1.1 19.3 12 24 A V > + 0 0 75 1,-0.2 4,-2.0 2,-0.2 3,-0.4 0.666 360.0 79.0 -76.3 -16.3 -77.5 -1.5 17.0 13 25 A L H > S+ 0 0 66 1,-0.2 4,-2.4 2,-0.2 5,-0.3 0.905 79.6 61.8 -57.6 -46.8 -78.7 -3.6 19.9 14 26 A V H > S+ 0 0 71 -3,-0.4 4,-2.2 1,-0.2 -1,-0.2 0.891 109.1 44.3 -49.0 -41.9 -79.7 -0.7 22.1 15 27 A R H > S+ 0 0 41 -4,-0.5 4,-2.5 -3,-0.4 -1,-0.2 0.914 110.5 52.5 -70.5 -43.7 -82.2 0.3 19.4 16 28 A X H X S+ 0 0 43 -4,-2.0 4,-1.2 1,-0.2 -1,-0.2 0.787 112.5 47.3 -63.7 -25.2 -83.5 -3.3 18.9 17 29 A E H X S+ 0 0 107 -4,-2.4 4,-2.4 -5,-0.2 -1,-0.2 0.904 109.2 52.9 -80.0 -44.3 -84.1 -3.5 22.6 18 30 A A H < S+ 0 0 37 -4,-2.2 4,-0.2 -5,-0.3 -2,-0.2 0.890 107.6 52.1 -57.5 -42.0 -85.8 -0.1 22.7 19 31 A I H >< S+ 0 0 6 -4,-2.5 3,-1.6 1,-0.2 4,-0.3 0.952 112.3 43.7 -60.8 -50.7 -88.2 -1.2 20.0 20 32 A I H >< S+ 0 0 2 -4,-1.2 3,-1.5 1,-0.3 -1,-0.2 0.839 105.8 66.1 -64.0 -31.2 -89.2 -4.4 21.7 21 33 A N T 3< S+ 0 0 79 -4,-2.4 -1,-0.3 1,-0.3 -2,-0.2 0.491 97.0 54.4 -70.0 -2.9 -89.4 -2.3 25.0 22 34 A S T < S+ 0 0 35 -3,-1.6 -1,-0.3 -4,-0.2 -2,-0.2 0.460 91.1 94.3-106.8 -5.2 -92.4 -0.4 23.6 23 35 A X S < S- 0 0 7 -3,-1.5 2,-0.1 -4,-0.3 -3,-0.0 -0.388 76.9-116.0 -83.3 163.4 -94.5 -3.4 22.8 24 36 A T > - 0 0 62 -2,-0.1 4,-1.6 1,-0.1 5,-0.1 -0.335 33.6-100.5 -88.0 176.7 -97.1 -4.9 25.1 25 37 A X H > S+ 0 0 127 1,-0.2 4,-1.3 2,-0.2 5,-0.1 0.912 124.4 51.7 -66.0 -37.8 -96.7 -8.4 26.6 26 38 A K H > S+ 0 0 155 1,-0.2 4,-2.7 2,-0.2 7,-0.2 0.821 107.0 52.1 -66.5 -34.3 -99.1 -9.7 23.9 27 39 A E H 4 S+ 0 0 0 1,-0.2 -1,-0.2 2,-0.2 -2,-0.2 0.863 110.0 49.0 -71.2 -34.4 -97.2 -8.2 21.1 28 40 A R H < S+ 0 0 38 -4,-1.6 -25,-2.1 1,-0.2 -24,-0.5 0.757 118.4 40.7 -74.6 -24.8 -94.0 -9.8 22.3 29 41 A A H < S+ 0 0 55 -4,-1.3 -2,-0.2 1,-0.2 -1,-0.2 0.807 126.5 29.8 -92.9 -34.4 -95.7 -13.1 22.7 30 42 A K S >< S+ 0 0 114 -4,-2.7 3,-2.5 -5,-0.1 -1,-0.2 -0.566 70.1 177.4-127.5 66.9 -97.8 -13.2 19.5 31 43 A P G > S+ 0 0 22 0, 0.0 3,-1.4 0, 0.0 -1,-0.1 0.642 71.9 71.0 -41.6 -28.1 -95.7 -11.1 17.1 32 44 A E G 3 S+ 0 0 119 1,-0.3 -5,-0.1 -3,-0.1 -2,-0.0 0.812 82.4 69.5 -66.6 -29.2 -98.2 -11.6 14.2 33 45 A I G < S+ 0 0 42 -3,-2.5 2,-1.2 -7,-0.2 -1,-0.3 0.492 75.9 104.4 -69.0 2.4 -100.8 -9.4 15.8 34 46 A I < + 0 0 10 -3,-1.4 -1,-0.1 -4,-0.2 2,-0.1 -0.682 46.4 147.6 -90.4 95.1 -98.5 -6.5 15.0 35 47 A K > - 0 0 145 -2,-1.2 4,-2.9 4,-0.0 5,-0.2 -0.223 60.5 -56.6-106.6-160.5 -99.9 -4.6 12.1 36 48 A G H > S+ 0 0 44 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.891 127.4 43.3 -45.7 -64.6 -100.0 -1.0 10.9 37 49 A S H > S+ 0 0 85 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.911 116.7 47.7 -55.0 -47.6 -101.5 0.9 13.8 38 50 A R H > S+ 0 0 89 1,-0.2 4,-2.9 2,-0.2 -1,-0.2 0.944 109.1 55.2 -61.7 -44.0 -99.5 -1.0 16.4 39 51 A K H X S+ 0 0 49 -4,-2.9 4,-3.8 1,-0.2 5,-0.2 0.922 107.8 48.7 -54.5 -46.4 -96.3 -0.4 14.4 40 52 A R H X S+ 0 0 156 -4,-2.4 4,-2.6 2,-0.2 5,-0.3 0.923 111.1 49.8 -60.6 -43.6 -96.9 3.3 14.4 41 53 A R H X S+ 0 0 104 -4,-2.2 4,-2.7 2,-0.2 -2,-0.2 0.947 117.1 42.2 -58.2 -49.3 -97.5 3.3 18.2 42 54 A I H X S+ 0 0 0 -4,-2.9 4,-2.2 2,-0.2 6,-0.4 0.969 111.8 52.6 -60.8 -59.6 -94.3 1.3 18.6 43 55 A A H <>S+ 0 0 4 -4,-3.8 5,-2.6 1,-0.3 3,-0.5 0.920 118.0 38.5 -43.2 -55.4 -92.2 3.3 16.2 44 56 A A H ><5S+ 0 0 77 -4,-2.6 3,-1.7 1,-0.2 -1,-0.3 0.868 110.1 61.2 -66.2 -38.6 -93.2 6.5 17.9 45 57 A G H 3<5S+ 0 0 53 -4,-2.7 -1,-0.2 -5,-0.3 -2,-0.2 0.817 113.3 36.2 -59.7 -30.8 -93.0 5.0 21.3 46 58 A S T 3<5S- 0 0 19 -4,-2.2 -1,-0.3 -3,-0.5 -2,-0.2 0.046 114.4-109.8-111.1 26.2 -89.3 4.2 20.8 47 59 A G T < 5S+ 0 0 64 -3,-1.7 -3,-0.2 1,-0.2 -4,-0.1 0.666 79.8 127.8 56.8 17.3 -88.4 7.3 18.8 48 60 A X < - 0 0 65 -5,-2.6 2,-0.4 -6,-0.4 -1,-0.2 -0.305 63.6-106.7 -96.2-179.0 -88.0 5.0 15.8 49 61 A Q >> - 0 0 113 1,-0.1 4,-1.8 -3,-0.1 3,-1.3 -0.842 28.8-119.9-107.1 144.7 -89.3 5.0 12.2 50 62 A V H 3> S+ 0 0 46 -2,-0.4 4,-2.4 1,-0.3 5,-0.2 0.914 116.2 59.7 -51.3 -42.6 -91.9 2.5 11.3 51 63 A Q H 3> S+ 0 0 139 1,-0.2 4,-1.8 2,-0.2 -1,-0.3 0.843 103.1 51.9 -53.9 -35.6 -89.5 1.2 8.7 52 64 A D H <> S+ 0 0 69 -3,-1.3 4,-2.6 2,-0.2 -1,-0.2 0.923 106.8 51.9 -67.2 -44.8 -87.1 0.4 11.6 53 65 A V H X S+ 0 0 0 -4,-1.8 4,-2.8 1,-0.2 5,-0.2 0.933 108.5 51.4 -56.2 -47.5 -89.7 -1.5 13.5 54 66 A N H X S+ 0 0 51 -4,-2.4 4,-3.4 1,-0.2 -1,-0.2 0.895 108.0 52.4 -57.0 -41.1 -90.4 -3.6 10.3 55 67 A R H X S+ 0 0 42 -4,-1.8 4,-3.0 2,-0.2 -1,-0.2 0.940 109.3 49.8 -59.6 -46.2 -86.6 -4.3 10.1 56 68 A L H X S+ 0 0 3 -4,-2.6 4,-2.4 1,-0.2 -2,-0.2 0.906 114.1 44.0 -57.6 -46.6 -86.8 -5.5 13.7 57 69 A L H X S+ 0 0 28 -4,-2.8 4,-1.8 2,-0.2 -1,-0.2 0.884 111.1 56.3 -66.8 -38.2 -89.7 -7.7 12.9 58 70 A K H X S+ 0 0 114 -4,-3.4 4,-1.9 -5,-0.2 -2,-0.2 0.939 110.3 43.8 -58.3 -50.1 -88.0 -8.8 9.8 59 71 A Q H X S+ 0 0 93 -4,-3.0 4,-3.3 1,-0.2 5,-0.3 0.970 110.7 52.3 -60.9 -56.2 -84.9 -10.0 11.7 60 72 A F H X S+ 0 0 20 -4,-2.4 4,-2.4 1,-0.2 -1,-0.2 0.812 108.3 55.4 -50.2 -33.5 -86.8 -11.7 14.5 61 73 A D H X S+ 0 0 64 -4,-1.8 4,-2.5 2,-0.2 -1,-0.2 0.959 110.3 41.4 -66.6 -51.6 -88.7 -13.6 11.8 62 74 A D H X S+ 0 0 62 -4,-1.9 4,-2.3 1,-0.2 -2,-0.2 0.919 116.0 52.3 -61.1 -41.8 -85.6 -15.0 10.1 63 75 A X H X S+ 0 0 59 -4,-3.3 4,-0.7 1,-0.2 -1,-0.2 0.895 108.1 52.2 -59.4 -40.9 -84.2 -15.6 13.6 64 76 A Q H >X S+ 0 0 24 -4,-2.4 4,-1.8 -5,-0.3 3,-1.3 0.948 108.3 49.3 -60.9 -51.5 -87.4 -17.5 14.4 65 77 A R H 3< S+ 0 0 156 -4,-2.5 -2,-0.2 1,-0.3 -1,-0.2 0.929 102.6 60.4 -53.2 -52.0 -87.2 -19.8 11.4 66 78 A X H 3< S+ 0 0 135 -4,-2.3 3,-0.3 1,-0.2 -1,-0.3 0.753 107.2 50.0 -49.0 -26.0 -83.6 -20.6 12.1 67 79 A X H X< S+ 0 0 74 -3,-1.3 2,-3.4 -4,-0.7 3,-0.8 0.954 98.0 63.8 -77.7 -55.8 -84.9 -22.0 15.4 68 80 A K T 3< S+ 0 0 89 -4,-1.8 -1,-0.2 1,-0.3 -2,-0.1 -0.261 91.6 70.8 -68.9 57.3 -87.8 -24.1 13.9 69 81 A K T 3 0 0 174 -2,-3.4 -1,-0.3 -3,-0.3 -2,-0.1 0.065 360.0 360.0-159.3 24.6 -85.2 -26.3 12.1 70 82 A X < 0 0 233 -3,-0.8 -2,-0.1 0, 0.0 -3,-0.1 -0.041 360.0 360.0 174.2 360.0 -83.6 -28.2 15.0