==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA EXCISION REPAIR 10-NOV-99 1QOJ . COMPND 2 MOLECULE: UVRB; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR M.SOHI,A.ALEXANDROVICH,G.MOOLENAAR,R.VISSE,N.GOOSEN, . 91 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5889.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 89 97.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 13.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 70 76.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 2 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 628 A S > 0 0 94 0, 0.0 4,-2.9 0, 0.0 3,-0.2 0.000 360.0 360.0 360.0 158.4 14.6 20.9 5.2 2 629 A P H > + 0 0 58 0, 0.0 4,-3.4 0, 0.0 5,-0.3 0.850 360.0 59.1 -46.2 -38.3 16.5 23.3 7.4 3 630 A K H > S+ 0 0 65 2,-0.2 4,-2.1 1,-0.2 5,-0.1 0.956 108.7 40.3 -60.0 -51.9 18.7 23.7 4.3 4 631 A A H > S+ 0 0 55 -3,-0.2 4,-4.1 2,-0.2 5,-0.3 0.962 116.1 51.3 -63.2 -48.0 15.9 24.9 2.1 5 632 A L H X S+ 0 0 31 -4,-2.9 4,-3.8 1,-0.3 5,-0.3 0.951 111.3 46.5 -51.0 -54.6 14.4 27.0 4.8 6 633 A Q H X S+ 0 0 107 -4,-3.4 4,-1.6 -5,-0.2 -1,-0.3 0.868 115.2 50.9 -54.2 -35.3 17.8 28.6 5.4 7 634 A Q H X S+ 0 0 60 -4,-2.1 4,-2.1 -5,-0.3 -2,-0.3 0.991 113.1 40.8 -65.6 -61.1 17.8 29.0 1.7 8 635 A K H X S+ 0 0 109 -4,-4.1 4,-2.5 1,-0.2 5,-0.4 0.897 110.2 61.8 -52.5 -43.9 14.4 30.6 1.3 9 636 A I H X S+ 0 0 13 -4,-3.8 4,-1.9 -5,-0.3 -1,-0.2 0.916 109.4 38.3 -54.7 -49.2 15.0 32.7 4.4 10 637 A H H X S+ 0 0 135 -4,-1.6 4,-1.2 -5,-0.3 -1,-0.3 0.897 110.6 62.2 -72.9 -30.6 18.0 34.5 2.9 11 638 A E H >X S+ 0 0 57 -4,-2.1 4,-1.6 1,-0.2 3,-0.9 0.966 111.2 36.4 -56.0 -55.3 16.3 34.6 -0.6 12 639 A L H 3X S+ 0 0 19 -4,-2.5 4,-4.7 1,-0.2 5,-0.3 0.893 109.0 65.6 -63.4 -39.7 13.4 36.8 0.7 13 640 A E H 3X S+ 0 0 40 -4,-1.9 4,-1.4 -5,-0.4 -1,-0.2 0.769 105.4 44.5 -56.7 -25.3 15.7 38.7 3.0 14 641 A G H <>S+ 0 0 41 -4,-2.9 5,-2.1 2,-0.2 3,-1.3 0.965 112.4 50.4 -54.1 -59.0 12.4 46.6 -2.2 20 647 A A H ><5S+ 0 0 16 -4,-1.9 3,-2.4 1,-0.3 -1,-0.2 0.858 105.3 59.1 -46.7 -43.2 12.7 48.7 0.9 21 648 A Q H 3<5S+ 0 0 96 -4,-1.7 -1,-0.3 1,-0.3 -2,-0.2 0.896 108.4 43.9 -55.6 -40.6 15.8 50.2 -0.6 22 649 A N T <<5S- 0 0 89 -4,-1.6 -1,-0.3 -3,-1.3 -2,-0.2 0.192 121.0-111.4 -90.4 19.7 13.6 51.4 -3.5 23 650 A L T < 5S+ 0 0 52 -3,-2.4 2,-2.4 1,-0.2 -3,-0.2 0.548 73.5 142.4 67.2 5.3 11.0 52.5 -1.0 24 651 A E >< + 0 0 66 -5,-2.1 4,-1.5 -6,-0.2 -1,-0.2 -0.425 21.4 163.5 -71.9 68.8 8.7 49.8 -2.3 25 652 A F T >4 + 0 0 0 -2,-2.4 2,-2.1 2,-0.2 3,-0.8 0.316 52.5 60.4 -69.0-143.4 7.2 48.9 1.1 26 653 A E T 3> S+ 0 0 92 1,-0.3 4,-3.6 2,-0.1 5,-0.2 -0.420 114.0 43.1 62.1 -87.3 4.0 46.8 0.9 27 654 A E H 3>>S+ 0 0 58 -2,-2.1 4,-4.1 2,-0.3 5,-0.5 0.941 112.5 54.3 -44.4 -54.6 5.9 44.0 -0.9 28 655 A A H 5S+ 0 0 12 2,-0.2 4,-1.7 3,-0.1 -2,-0.3 0.935 114.3 45.7 -66.5 -49.2 5.7 44.2 4.2 30 657 A Q H X5S+ 0 0 115 -4,-3.6 4,-2.0 1,-0.2 3,-0.5 0.957 115.2 46.1 -64.7 -48.6 4.5 41.0 2.5 31 658 A I H X5S+ 0 0 14 -4,-4.1 4,-2.5 1,-0.2 -1,-0.2 0.889 107.7 61.9 -58.1 -35.8 7.9 39.5 2.1 32 659 A R H XX S+ 0 0 98 -4,-2.0 4,-1.9 1,-0.2 3,-0.5 0.979 105.0 48.7 -55.4 -52.8 6.7 35.5 4.7 35 662 A L H 3X S+ 0 0 2 -4,-2.5 4,-2.1 1,-0.3 -1,-0.2 0.836 103.1 66.0 -52.3 -34.0 10.0 35.5 6.5 36 663 A H H 3X S+ 0 0 96 -4,-0.9 4,-1.3 -5,-0.2 -1,-0.3 0.952 105.2 39.5 -57.5 -49.5 7.9 35.5 9.7 37 664 A Q H XX S+ 0 0 86 -4,-1.9 4,-2.8 -3,-0.5 3,-0.6 0.989 112.5 54.2 -67.2 -52.1 6.5 32.1 9.0 38 665 A L H 3X S+ 0 0 25 -4,-1.9 4,-3.4 1,-0.3 -1,-0.2 0.826 103.9 55.3 -48.3 -43.9 9.7 30.5 7.6 39 666 A R H 3X S+ 0 0 106 -4,-2.1 4,-2.6 2,-0.2 -1,-0.3 0.945 113.2 44.7 -51.7 -50.2 11.7 31.4 10.7 40 667 A E H - 0 0 54 1,-0.1 4,-3.8 0, 0.0 5,-0.2 -0.695 360.0-102.6-105.3 159.8 5.6 78.2 4.1 49 629 B P H > S+ 0 0 50 0, 0.0 4,-3.5 0, 0.0 5,-0.2 0.849 126.1 53.3 -46.3 -39.0 8.3 76.6 2.0 50 630 B K H > S+ 0 0 68 2,-0.2 4,-2.2 1,-0.2 5,-0.1 0.959 111.6 42.2 -64.3 -52.0 10.4 76.8 5.1 51 631 B A H > S+ 0 0 50 2,-0.2 4,-2.5 1,-0.2 5,-0.3 0.960 117.4 49.0 -58.3 -47.2 7.8 75.0 7.2 52 632 B L H X S+ 0 0 21 -4,-3.8 4,-3.7 1,-0.2 5,-0.3 0.950 110.4 48.8 -54.6 -55.3 7.2 72.6 4.3 53 633 B Q H X S+ 0 0 97 -4,-3.5 4,-2.7 -5,-0.2 5,-0.3 0.860 111.5 53.4 -55.1 -35.7 10.9 71.9 3.8 54 634 B Q H X S+ 0 0 61 -4,-2.2 4,-3.1 2,-0.2 -2,-0.2 0.990 116.5 33.1 -66.4 -61.8 11.2 71.3 7.5 55 635 B K H X S+ 0 0 47 -4,-2.5 4,-3.8 1,-0.2 5,-0.3 0.929 118.5 57.4 -59.5 -45.5 8.5 68.7 8.0 56 636 B I H X S+ 0 0 7 -4,-3.7 4,-1.5 -5,-0.3 -1,-0.2 0.921 113.0 38.2 -48.7 -47.5 9.3 67.4 4.5 57 637 B H H X S+ 0 0 97 -4,-2.7 4,-0.6 -5,-0.3 -1,-0.2 0.915 115.6 53.8 -79.6 -32.7 12.9 66.8 5.4 58 638 B E H >X S+ 0 0 116 -4,-3.1 3,-2.1 -5,-0.3 4,-1.7 0.973 108.0 49.7 -55.5 -56.0 12.0 65.6 8.9 59 639 B L H 3X S+ 0 0 19 -4,-3.8 4,-3.2 1,-0.3 5,-0.3 0.872 99.1 68.4 -53.2 -36.8 9.5 63.0 7.5 60 640 B E H 3X S+ 0 0 58 -4,-1.5 4,-0.9 -5,-0.3 -1,-0.3 0.759 105.6 40.4 -55.5 -25.8 12.2 61.8 5.2 61 641 B G H <>S+ 0 0 34 -4,-2.6 5,-1.9 1,-0.2 3,-1.1 0.965 110.1 55.0 -52.3 -57.7 10.7 52.8 10.4 67 647 B A H ><5S+ 0 0 11 -4,-2.1 3,-1.6 1,-0.3 -1,-0.2 0.828 103.5 57.0 -42.5 -43.3 11.8 51.1 7.2 68 648 B Q H 3<5S+ 0 0 155 -4,-2.0 -1,-0.3 1,-0.3 -2,-0.2 0.903 108.1 45.9 -59.6 -42.0 15.0 50.3 9.0 69 649 B N T <<5S- 0 0 92 -4,-1.6 -1,-0.3 -3,-1.1 -2,-0.2 0.135 120.4-109.5 -90.6 23.2 13.0 48.6 11.8 70 650 B L T < 5S+ 0 0 64 -3,-1.6 2,-2.3 1,-0.2 -3,-0.2 0.542 75.5 139.6 66.7 5.3 10.9 46.7 9.2 71 651 B E >< + 0 0 72 -5,-1.9 4,-1.6 -6,-0.2 -1,-0.2 -0.435 23.7 162.0 -73.2 68.4 7.9 48.9 10.1 72 652 B F T >4 + 0 0 1 -2,-2.3 2,-2.2 2,-0.2 3,-0.7 0.245 53.7 55.9 -68.7-149.5 6.7 49.3 6.5 73 653 B E T 3> S+ 0 0 69 1,-0.3 4,-4.3 2,-0.1 5,-0.2 -0.388 117.0 42.7 65.8 -87.5 3.1 50.5 6.1 74 654 B E H 3> S+ 0 0 65 -2,-2.2 4,-3.4 2,-0.3 5,-0.4 0.930 112.9 54.8 -40.8 -55.1 3.9 53.5 8.3 75 655 B A H S+ 0 0 5 2,-0.2 4,-1.9 1,-0.2 5,-0.3 0.933 113.0 51.0 -68.5 -49.2 4.8 53.6 3.2 77 657 B Q H X S+ 0 0 127 -4,-4.3 4,-2.4 1,-0.3 3,-0.4 0.946 110.8 48.5 -60.3 -46.4 2.2 56.1 4.6 78 658 B I H X S+ 0 0 16 -4,-3.4 4,-2.4 1,-0.2 -1,-0.3 0.887 108.2 58.9 -56.6 -35.9 5.0 58.6 5.5 79 659 B R H X S+ 0 0 27 -4,-1.2 4,-1.0 -5,-0.4 -1,-0.2 0.878 109.4 39.9 -63.0 -40.1 6.3 58.0 2.0 80 660 B D H X S+ 0 0 78 -4,-1.9 4,-1.6 -3,-0.4 -1,-0.2 0.789 109.4 61.2 -82.8 -23.9 3.1 59.2 0.3 81 661 B Q H >X S+ 0 0 79 -4,-2.4 4,-2.6 -5,-0.3 3,-0.6 0.977 105.3 48.7 -54.5 -53.7 2.7 62.0 2.9 82 662 B L H 3X S+ 0 0 4 -4,-2.4 4,-3.1 1,-0.3 -1,-0.2 0.823 102.4 63.2 -57.3 -34.9 6.0 63.3 1.6 83 663 B H H 3X S+ 0 0 104 -4,-1.0 4,-1.6 2,-0.2 -1,-0.3 0.945 111.7 35.7 -57.3 -48.5 4.7 63.0 -1.9 84 664 B Q H X S+ 0 0 83 -4,-3.0 3,-3.0 2,-0.2 4,-1.7 0.997 105.5 50.7 -61.2 -60.4 2.5 71.5 -1.6 89 669 B F H 3< S+ 0 0 69 -4,-2.6 -2,-0.2 1,-0.3 -1,-0.2 0.858 104.5 57.6 -38.3 -50.4 5.9 73.1 -1.1 90 670 B I H 3< S+ 0 0 144 -4,-2.0 -1,-0.3 1,-0.2 -2,-0.2 0.768 111.0 44.6 -62.3 -19.4 6.2 73.7 -4.8 91 671 B A H << 0 0 84 -3,-3.0 -2,-0.2 -4,-0.7 -1,-0.2 0.769 360.0 360.0 -92.7 -30.2 2.9 75.7 -4.5 92 672 B A < 0 0 66 -4,-1.7 -2,-0.2 -5,-0.1 -3,-0.2 0.749 360.0 360.0 -68.7 360.0 3.8 77.6 -1.4