==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 07-JUN-99 1QQI . COMPND 2 MOLECULE: PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR H.OKAMURA,S.HANAOKA,A.NAGADOI,K.MAKINO,Y.NISHIMURA,RIKEN . 104 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6617.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 80 76.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 20.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 14 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 31 29.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 166 0, 0.0 2,-0.2 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 86.2 -15.9 -38.9 20.5 2 2 A A + 0 0 96 3,-0.0 2,-0.2 0, 0.0 3,-0.1 -0.778 360.0 146.8-167.7 118.3 -13.8 -40.0 17.4 3 3 A V - 0 0 45 -2,-0.2 14,-0.3 1,-0.2 15,-0.1 -0.771 68.3 -64.3-160.1 107.8 -13.6 -43.3 15.6 4 4 A E S S- 0 0 166 -2,-0.2 2,-0.7 1,-0.2 -1,-0.2 -0.274 115.3 -8.4 50.2-119.2 -13.1 -43.7 11.8 5 5 A E - 0 0 119 -3,-0.1 2,-0.8 2,-0.0 -1,-0.2 -0.846 68.8-170.0-113.3 94.5 -16.1 -42.1 10.1 6 6 A V - 0 0 26 -2,-0.7 2,-1.1 9,-0.1 9,-0.2 -0.752 15.6-146.5 -85.0 110.0 -18.8 -41.2 12.7 7 7 A I E -A 14 0A 17 7,-1.9 7,-2.8 -2,-0.8 2,-0.9 -0.679 15.9-172.2 -83.9 100.8 -21.9 -40.3 10.6 8 8 A E E +A 13 0A 119 -2,-1.1 2,-0.5 5,-0.3 5,-0.2 -0.820 16.0 161.6 -96.6 99.8 -23.6 -37.6 12.7 9 9 A M E > S-A 12 0A 40 3,-1.8 3,-2.0 -2,-0.9 -2,-0.0 -0.982 70.6 -14.2-125.7 121.3 -27.0 -36.9 11.0 10 10 A Q T 3 S- 0 0 91 -2,-0.5 -1,-0.1 1,-0.3 3,-0.1 0.787 126.5 -58.9 60.5 28.8 -29.9 -35.2 12.8 11 11 A G T 3 S+ 0 0 39 1,-0.2 13,-2.1 13,-0.1 2,-1.2 0.251 110.9 127.3 84.6 -12.9 -28.0 -35.8 16.1 12 12 A L E < -AB 9 23A 0 -3,-2.0 -3,-1.8 11,-0.2 2,-0.8 -0.663 48.5-159.3 -80.6 96.1 -28.1 -39.5 15.3 13 13 A S E -AB 8 22A 9 9,-2.8 9,-2.1 -2,-1.2 2,-0.4 -0.705 8.2-167.9 -83.8 107.2 -24.4 -40.4 15.6 14 14 A L E -AB 7 21A 0 -7,-2.8 -7,-1.9 -2,-0.8 7,-0.2 -0.816 8.1-163.2 -98.9 134.9 -23.8 -43.7 13.7 15 15 A D E >> - B 0 20A 4 5,-2.9 5,-1.7 -2,-0.4 4,-0.9 -0.925 7.3-173.0-120.2 101.4 -20.5 -45.6 14.2 16 16 A P T 45S+ 0 0 31 0, 0.0 -1,-0.1 0, 0.0 -10,-0.1 0.712 83.7 61.8 -65.7 -21.2 -19.9 -48.1 11.4 17 17 A T T 45S+ 0 0 54 -14,-0.3 -13,-0.1 1,-0.2 -11,-0.0 0.972 118.9 20.8 -69.8 -57.2 -16.9 -49.4 13.4 18 18 A S T 45S- 0 0 68 2,-0.1 -1,-0.2 -15,-0.1 3,-0.1 0.329 102.8-121.7 -94.9 5.2 -18.6 -50.6 16.5 19 19 A H T <5 + 0 0 101 -4,-0.9 2,-0.3 1,-0.2 16,-0.1 0.953 66.1 144.7 50.1 53.5 -22.1 -50.9 14.8 20 20 A R E < -B 15 0A 111 -5,-1.7 -5,-2.9 9,-0.1 2,-0.4 -0.931 37.6-161.9-126.2 146.7 -23.4 -48.4 17.4 21 21 A V E -BC 14 28A 2 7,-0.5 7,-3.0 -2,-0.3 2,-0.4 -0.997 3.5-171.5-131.4 134.4 -25.9 -45.6 17.3 22 22 A M E -BC 13 27A 61 -9,-2.1 -9,-2.8 -2,-0.4 2,-2.1 -0.970 19.7-145.7-130.1 116.1 -26.3 -42.7 19.7 23 23 A A E > S-BC 12 26A 16 3,-2.5 2,-1.6 -2,-0.4 3,-1.1 -0.550 83.7 -53.0 -78.7 78.3 -29.3 -40.3 19.5 24 24 A G T 3 S- 0 0 57 -13,-2.1 -1,-0.2 -2,-2.1 -13,-0.1 -0.312 126.6 -24.5 82.5 -51.9 -27.3 -37.3 20.6 25 25 A E T 3 S+ 0 0 156 -2,-1.6 -1,-0.3 1,-0.2 -2,-0.0 0.318 112.0 103.1-155.8 -40.1 -26.1 -39.3 23.7 26 26 A E E < S-C 23 0A 117 -3,-1.1 -3,-2.5 -4,-0.1 -1,-0.2 -0.419 72.0-127.6 -61.1 118.4 -28.7 -42.0 24.4 27 27 A P E -C 22 0A 94 0, 0.0 2,-0.5 0, 0.0 -5,-0.2 -0.470 20.4-159.9 -69.8 137.6 -27.3 -45.4 23.1 28 28 A L E -C 21 0A 22 -7,-3.0 -7,-0.5 -2,-0.2 2,-0.2 -0.932 7.1-167.7-125.1 105.6 -29.7 -47.2 20.7 29 29 A E + 0 0 184 -2,-0.5 2,-0.3 -9,-0.1 -9,-0.1 -0.646 20.6 141.0 -93.0 149.4 -29.0 -51.0 20.3 30 30 A M - 0 0 50 -2,-0.2 47,-0.0 50,-0.0 -2,-0.0 -0.947 50.9 -57.3-169.1 179.1 -30.7 -53.1 17.6 31 31 A G > - 0 0 15 -2,-0.3 4,-2.1 1,-0.1 5,-0.1 -0.214 47.6-112.5 -69.5 162.4 -30.0 -56.0 15.2 32 32 A P H > S+ 0 0 89 0, 0.0 4,-2.6 0, 0.0 5,-0.1 0.883 118.8 53.9 -61.8 -40.5 -27.2 -55.9 12.6 33 33 A T H > S+ 0 0 31 2,-0.2 4,-2.6 1,-0.2 5,-0.1 0.914 108.1 49.3 -61.0 -44.3 -29.8 -55.8 9.8 34 34 A E H > S+ 0 0 3 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.906 111.1 50.4 -61.5 -41.7 -31.5 -52.8 11.4 35 35 A F H X S+ 0 0 6 -4,-2.1 4,-3.0 2,-0.2 -2,-0.2 0.908 109.1 51.6 -62.2 -42.7 -28.1 -51.1 11.7 36 36 A K H X S+ 0 0 101 -4,-2.6 4,-3.3 2,-0.2 5,-0.3 0.947 107.6 51.8 -60.4 -50.4 -27.4 -51.8 8.0 37 37 A L H X S+ 0 0 0 -4,-2.6 4,-2.7 1,-0.2 -1,-0.2 0.934 114.3 44.0 -48.1 -53.2 -30.8 -50.2 7.0 38 38 A L H X S+ 0 0 0 -4,-2.2 4,-2.4 2,-0.2 -2,-0.2 0.924 114.4 48.4 -61.2 -48.0 -29.9 -47.1 9.0 39 39 A H H X S+ 0 0 60 -4,-3.0 4,-2.3 2,-0.2 -2,-0.2 0.928 114.4 46.2 -58.6 -47.2 -26.3 -47.0 7.7 40 40 A F H X S+ 0 0 23 -4,-3.3 4,-0.8 1,-0.2 -1,-0.2 0.898 111.9 51.7 -62.2 -41.9 -27.5 -47.4 4.1 41 41 A F H < S+ 0 0 0 -4,-2.7 3,-0.3 -5,-0.3 -1,-0.2 0.874 109.9 49.9 -62.5 -38.3 -30.2 -44.8 4.7 42 42 A M H < S+ 0 0 5 -4,-2.4 -2,-0.2 1,-0.2 -1,-0.2 0.905 110.0 48.5 -68.4 -42.7 -27.6 -42.4 6.0 43 43 A T H < S+ 0 0 74 -4,-2.3 -1,-0.2 1,-0.3 -2,-0.2 0.625 123.1 37.1 -71.8 -12.4 -25.2 -42.9 3.0 44 44 A H S < S- 0 0 60 -4,-0.8 56,-0.3 -3,-0.3 3,-0.3 -0.567 83.4-179.7-139.4 71.0 -28.3 -42.3 0.8 45 45 A P + 0 0 57 0, 0.0 56,-0.2 0, 0.0 -3,-0.1 -0.334 63.6 14.0 -73.5 155.7 -30.5 -39.6 2.4 46 46 A E S S+ 0 0 54 54,-2.5 2,-0.3 1,-0.1 55,-0.1 0.927 93.7 125.6 43.1 65.5 -33.8 -38.4 0.8 47 47 A R - 0 0 131 -3,-0.3 53,-0.4 -6,-0.1 2,-0.3 -0.920 61.5-124.3-153.1 123.0 -34.0 -41.3 -1.7 48 48 A V - 0 0 94 -2,-0.3 2,-0.4 51,-0.1 51,-0.2 -0.533 31.2-172.0 -70.6 126.3 -37.0 -43.7 -2.1 49 49 A Y E -D 98 0B 4 49,-2.6 49,-2.5 -2,-0.3 2,-0.1 -0.987 11.1-144.6-125.3 128.5 -35.8 -47.3 -1.7 50 50 A S E > -D 97 0B 36 -2,-0.4 4,-2.3 47,-0.3 47,-0.2 -0.350 31.4-105.3 -83.1 167.7 -38.0 -50.4 -2.4 51 51 A R H > S+ 0 0 49 45,-0.7 4,-3.1 1,-0.2 5,-0.2 0.930 122.6 56.0 -56.6 -46.7 -37.9 -53.6 -0.5 52 52 A E H > S+ 0 0 128 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.872 107.4 48.7 -53.1 -43.4 -36.0 -55.2 -3.4 53 53 A Q H > S+ 0 0 74 2,-0.2 4,-0.6 1,-0.2 -1,-0.2 0.961 112.4 46.4 -64.9 -52.0 -33.3 -52.5 -3.2 54 54 A L H >X>S+ 0 0 0 -4,-2.3 4,-2.0 1,-0.2 3,-1.3 0.920 113.6 49.9 -56.1 -45.9 -32.8 -52.9 0.5 55 55 A L H 3<>S+ 0 0 18 -4,-3.1 6,-2.4 1,-0.3 5,-0.5 0.888 110.8 49.7 -58.9 -41.2 -32.7 -56.7 0.1 56 56 A N H 3<5S+ 0 0 91 -4,-2.2 -1,-0.3 4,-0.2 -2,-0.2 0.506 126.2 27.5 -77.1 -4.6 -30.2 -56.3 -2.7 57 57 A H H <<5S+ 0 0 90 -3,-1.3 -2,-0.2 -4,-0.6 -3,-0.2 0.699 129.6 27.7-117.7 -70.2 -28.1 -54.0 -0.5 58 58 A V T <5S+ 0 0 10 -4,-2.0 -3,-0.2 1,-0.2 -4,-0.1 0.956 136.4 30.4 -64.9 -53.7 -28.5 -54.6 3.3 59 59 A W T > > - 0 0 112 -2,-0.1 3,-1.1 1,-0.1 4,-0.6 -0.353 27.3-115.4 -74.0 157.4 -39.8 -62.6 1.9 67 67 A D H >> S+ 0 0 71 1,-0.3 3,-1.4 2,-0.2 4,-0.9 0.858 116.7 66.0 -57.8 -35.7 -40.6 -58.9 1.2 68 68 A R H 3> S+ 0 0 135 1,-0.3 4,-2.1 2,-0.2 -1,-0.3 0.828 87.5 67.6 -55.2 -36.4 -42.4 -58.9 4.5 69 69 A T H <> S+ 0 0 31 -3,-1.1 4,-2.3 1,-0.2 -1,-0.3 0.836 95.1 56.7 -56.4 -33.7 -39.0 -59.5 6.3 70 70 A V H X S+ 0 0 62 -4,-3.0 3,-0.8 1,-0.2 4,-0.5 0.921 112.1 50.3 -58.5 -45.6 -38.2 -47.6 13.7 79 79 A K H >< S+ 0 0 129 -4,-2.8 3,-0.9 1,-0.3 -1,-0.2 0.874 106.9 55.0 -61.7 -36.2 -39.0 -48.9 17.2 80 80 A A H 3< S+ 0 0 19 -4,-2.4 4,-0.3 1,-0.3 -1,-0.3 0.768 112.6 43.5 -66.6 -24.7 -35.3 -48.5 18.1 81 81 A L H S+ 0 0 1 -4,-1.2 5,-1.9 -3,-0.8 6,-1.0 0.423 90.5 92.3 -97.3 -2.5 -35.7 -44.9 17.1 82 82 A E T <<5S+ 0 0 103 -3,-0.9 3,-0.4 -4,-0.5 -2,-0.2 0.889 81.0 53.9 -59.7 -44.2 -39.1 -44.5 18.9 83 83 A P T 45S+ 0 0 96 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 0.934 116.2 38.3 -58.2 -47.3 -37.5 -43.3 22.2 84 84 A G T 45S- 0 0 27 -4,-0.3 -2,-0.2 -58,-0.1 -3,-0.1 0.577 109.0-128.5 -77.5 -10.4 -35.7 -40.5 20.4 85 85 A G T ><5S+ 0 0 25 -4,-0.8 3,-0.7 -3,-0.4 -3,-0.2 0.688 75.0 125.4 69.1 18.3 -38.8 -40.0 18.1 86 86 A H G >>< + 0 0 41 -5,-1.9 3,-2.0 1,-0.2 4,-0.6 0.537 41.3 93.7 -84.0 -8.2 -36.4 -40.3 15.2 87 87 A D G >4 S+ 0 0 18 -6,-1.0 3,-0.7 1,-0.3 -1,-0.2 0.792 72.0 70.4 -53.6 -30.1 -38.5 -43.1 13.7 88 88 A R G <4 S+ 0 0 162 -3,-0.7 -1,-0.3 1,-0.2 13,-0.2 0.807 87.2 64.6 -58.6 -31.5 -40.3 -40.4 11.7 89 89 A M G <4 S+ 0 0 9 -3,-2.0 12,-2.8 1,-0.2 2,-1.5 0.911 90.9 67.7 -59.4 -43.0 -37.1 -40.0 9.6 90 90 A V E << S-E 100 0B 0 -3,-0.7 2,-0.3 -4,-0.6 10,-0.2 -0.642 84.7-160.9 -79.7 90.3 -37.5 -43.6 8.3 91 91 A Q E -E 99 0B 64 8,-2.7 8,-1.2 -2,-1.5 2,-1.0 -0.608 11.8-142.5 -79.6 131.2 -40.7 -43.0 6.3 92 92 A T E -E 98 0B 63 -2,-0.3 2,-2.3 6,-0.2 6,-0.2 -0.813 8.8-157.7 -94.9 98.5 -42.7 -46.1 5.4 93 93 A V E >> -E 97 0B 50 4,-1.3 3,-2.3 -2,-1.0 4,-1.7 -0.500 48.7 -92.7 -77.9 75.4 -44.0 -45.4 1.9 94 94 A R T 34 S- 0 0 216 -2,-2.3 -1,-0.1 1,-0.3 3,-0.0 -0.200 82.2 -39.6 50.5-137.4 -46.9 -47.9 2.2 95 95 A G T 34 S+ 0 0 45 1,-0.1 -1,-0.3 -3,-0.1 -44,-0.2 0.070 130.6 80.3-103.1 21.0 -45.9 -51.3 0.9 96 96 A T T <4 S- 0 0 96 -3,-2.3 -45,-0.7 1,-0.3 2,-0.2 0.895 103.9 -64.6 -91.3 -52.4 -44.0 -49.7 -1.9 97 97 A G E < -DE 50 93B 0 -4,-1.7 -4,-1.3 -47,-0.2 -1,-0.3 -0.862 45.0-103.2-171.1-156.7 -40.7 -48.7 -0.2 98 98 A Y E -DE 49 92B 0 -49,-2.5 -49,-2.6 -2,-0.2 2,-0.3 -0.826 19.7-160.5-144.3 178.5 -39.1 -46.5 2.4 99 99 A R E - E 0 91B 72 -8,-1.2 -8,-2.7 -2,-0.2 2,-0.9 -0.949 22.9-127.7-167.5 146.8 -37.0 -43.3 2.7 100 100 A F E - E 0 90B 0 -53,-0.4 -54,-2.5 -56,-0.3 2,-1.1 -0.812 29.3-178.3-102.9 91.0 -34.7 -41.4 5.1 101 101 A S + 0 0 25 -12,-2.8 -2,-0.0 -2,-0.9 -11,-0.0 -0.758 13.8 160.3 -94.7 93.4 -36.2 -37.9 5.4 102 102 A T - 0 0 28 -2,-1.1 -1,-0.2 -13,-0.0 -12,-0.0 0.983 67.5 -80.0 -73.7 -63.2 -33.8 -36.0 7.7 103 103 A R 0 0 202 -14,-0.0 -2,-0.0 0, 0.0 0, 0.0 0.112 360.0 360.0-169.8 -53.4 -34.8 -32.5 6.8 104 104 A F 0 0 219 0, 0.0 -3,-0.0 0, 0.0 0, 0.0 0.728 360.0 360.0 63.3 360.0 -33.0 -31.5 3.5