==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DE NOVO PROTEIN 17-NOV-03 1RIK . COMPND 2 MOLECULE: E6APC1 PEPTIDE; . SOURCE 2 SYNTHETIC: YES; . AUTHOR Y.LIU,Z.LIU,E.ANDROPHY,J.CHEN,J.D.BALEJA . 29 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2974.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 15 51.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 10.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 17.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 5 17.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A Y 0 0 194 0, 0.0 12,-0.2 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 108.0 -8.3 13.4 4.8 2 2 A K + 0 0 145 10,-0.7 11,-0.2 1,-0.1 2,-0.2 0.885 360.0 24.0 -95.2 -54.8 -5.9 14.5 2.0 3 3 A F E -A 12 0A 114 9,-3.0 9,-0.9 11,-0.2 2,-0.3 -0.616 63.5-156.0-109.8 170.8 -5.2 11.4 -0.0 4 4 A A E -A 11 0A 67 7,-0.2 7,-0.2 -2,-0.2 14,-0.0 -0.987 23.6-112.3-150.0 136.9 -7.1 8.1 -0.5 5 5 A C - 0 0 12 5,-2.1 14,-0.0 -2,-0.3 13,-0.0 -0.474 14.5-147.3 -70.8 135.7 -5.9 4.6 -1.5 6 6 A P S S+ 0 0 130 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.681 99.5 35.0 -74.8 -18.5 -7.1 3.4 -5.0 7 7 A E S S+ 0 0 139 1,-0.1 -2,-0.0 3,-0.1 15,-0.0 0.836 123.7 30.5-100.7 -48.8 -7.3 -0.2 -3.7 8 8 A C S S- 0 0 22 2,-0.1 -1,-0.1 1,-0.0 -3,-0.1 -0.588 81.5-110.4-109.5 171.8 -8.4 0.1 -0.1 9 9 A P S S+ 0 0 109 0, 0.0 2,-0.2 0, 0.0 -1,-0.0 0.060 70.7 129.8 -89.7 25.4 -10.6 2.6 1.8 10 10 A K - 0 0 85 8,-0.0 -5,-2.1 2,-0.0 2,-0.4 -0.506 38.3-164.0 -81.6 150.4 -7.7 4.1 3.8 11 11 A R E -A 4 0A 122 -7,-0.2 2,-0.3 -2,-0.2 -7,-0.2 -0.998 6.4-176.1-137.2 136.6 -7.1 7.9 4.0 12 12 A F E -A 3 0A 55 -9,-0.9 -9,-3.0 -2,-0.4 -10,-0.7 -0.983 30.0-141.7-135.8 146.9 -4.1 9.9 5.0 13 13 A M S S+ 0 0 136 -2,-0.3 2,-0.2 -11,-0.2 -1,-0.1 0.783 90.5 60.8 -74.0 -28.1 -3.2 13.6 5.5 14 14 A R - 0 0 148 1,-0.1 4,-0.4 -12,-0.1 -11,-0.2 -0.636 68.5-150.1 -99.7 158.9 0.3 13.0 4.1 15 15 A S S > S+ 0 0 63 -2,-0.2 4,-1.9 2,-0.1 -1,-0.1 0.855 96.6 43.1 -92.6 -44.2 1.3 11.7 0.6 16 16 A D H > S+ 0 0 129 2,-0.2 4,-1.9 1,-0.2 5,-0.1 0.940 116.4 47.0 -67.9 -49.0 4.6 10.0 1.5 17 17 A H H > S+ 0 0 92 1,-0.2 4,-1.2 2,-0.2 -1,-0.2 0.908 111.6 52.2 -59.4 -43.5 3.2 8.4 4.7 18 18 A L H >> S+ 0 0 4 -4,-0.4 4,-1.5 1,-0.2 3,-0.8 0.925 108.9 49.2 -58.5 -46.9 0.1 7.2 2.9 19 19 A T H 3X S+ 0 0 73 -4,-1.9 4,-0.5 1,-0.3 -1,-0.2 0.848 101.6 64.2 -62.3 -33.2 2.2 5.6 0.1 20 20 A L H >< S+ 0 0 113 -4,-1.9 3,-0.7 1,-0.2 4,-0.3 0.856 102.7 50.6 -57.6 -34.5 4.3 3.9 2.9 21 21 A H H X< S+ 0 0 18 -4,-1.2 3,-1.8 -3,-0.8 4,-0.4 0.924 101.9 58.2 -67.3 -49.2 1.1 2.1 3.8 22 22 A I H 3< S+ 0 0 48 -4,-1.5 4,-0.4 1,-0.3 3,-0.4 0.537 84.8 84.5 -63.1 -4.1 0.4 0.9 0.2 23 23 A L T X< S+ 0 0 97 -3,-0.7 3,-0.8 -4,-0.5 -1,-0.3 0.852 88.1 51.8 -66.4 -33.3 3.8 -0.8 0.3 24 24 A L G X S+ 0 0 108 -3,-1.8 3,-1.5 -4,-0.3 -1,-0.2 0.698 89.5 79.9 -75.4 -19.8 2.1 -3.8 2.0 25 25 A H G 3 S+ 0 0 44 -3,-0.4 -1,-0.2 -4,-0.4 -2,-0.2 0.778 73.1 79.2 -57.6 -27.8 -0.6 -4.0 -0.8 26 26 A E G < S+ 0 0 160 -3,-0.8 2,-0.7 -4,-0.4 -1,-0.3 0.856 84.2 69.0 -48.8 -39.5 2.0 -5.7 -3.0 27 27 A N S < S- 0 0 131 -3,-1.5 2,-0.3 -4,-0.2 -1,-0.1 -0.755 73.7-172.9 -88.1 114.0 1.2 -9.0 -1.1 28 28 A K 0 0 173 -2,-0.7 -2,-0.0 1,-0.1 -3,-0.0 -0.748 360.0 360.0-107.2 155.2 -2.3 -10.2 -1.9 29 29 A K 0 0 243 -2,-0.3 -1,-0.1 0, 0.0 0, 0.0 0.804 360.0 360.0 72.3 360.0 -4.3 -13.0 -0.3