==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE(ENDORIBONUCLEASE) 20-AUG-91 6RNT . COMPND 2 MOLECULE: RIBONUCLEASE T1; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR J.DING,G.KOELLNER,H.-P.GRUNERT,W.SAENGER . 104 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5428.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 54.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 26 25.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 14.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 151 0, 0.0 2,-0.4 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 149.1 6.2 -4.8 15.2 2 2 A a - 0 0 47 1,-0.1 10,-0.2 10,-0.1 3,-0.2 -0.813 360.0-155.0-100.5 140.0 7.7 -1.6 13.6 3 3 A D S S+ 0 0 88 8,-1.8 2,-0.4 -2,-0.4 9,-0.2 0.794 92.3 18.7 -81.3 -25.7 6.2 1.7 14.1 4 4 A Y E -A 11 0A 63 7,-2.0 7,-2.9 -3,-0.1 2,-0.5 -0.994 69.9-161.2-143.2 133.2 7.8 2.8 10.8 5 5 A T E -A 10 0A 45 -2,-0.4 99,-2.5 5,-0.2 2,-0.7 -0.998 4.9-174.5-117.0 120.4 9.2 0.5 8.1 6 6 A b E > -A 9 0A 1 3,-2.5 3,-2.3 -2,-0.5 2,-0.5 -0.955 67.9 -59.8-113.5 91.6 11.7 2.1 5.7 7 7 A G T 3 S- 0 0 47 -2,-0.7 97,-0.1 1,-0.3 84,-0.0 -0.570 123.0 -16.9 73.2-119.3 12.4 -0.7 3.0 8 8 A S T 3 S+ 0 0 124 -2,-0.5 2,-0.3 -3,-0.1 -1,-0.3 0.452 117.4 103.6-100.6 -2.0 13.7 -3.5 5.2 9 9 A N E < -A 6 0A 49 -3,-2.3 -3,-2.5 -7,-0.0 2,-0.4 -0.655 55.5-155.0 -84.8 135.5 14.6 -1.2 8.2 10 10 A a E -A 5 0A 64 -2,-0.3 2,-0.4 -5,-0.2 -5,-0.2 -0.936 11.3-173.4-114.6 130.0 12.3 -1.3 11.3 11 11 A Y E -A 4 0A 2 -7,-2.9 -7,-2.0 -2,-0.4 -8,-1.8 -0.978 13.5-147.7-127.0 141.7 12.0 1.6 13.7 12 12 A S > - 0 0 36 -2,-0.4 4,-1.9 -10,-0.2 3,-0.3 -0.489 35.7-106.9 -94.3 167.9 10.3 2.0 16.9 13 13 A S H > S+ 0 0 63 1,-0.2 4,-2.8 2,-0.2 5,-0.2 0.933 122.1 57.7 -58.9 -33.3 8.8 5.4 18.1 14 14 A S H > S+ 0 0 76 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.905 102.7 51.8 -62.9 -39.7 11.8 5.6 20.6 15 15 A D H > S+ 0 0 48 -3,-0.3 4,-2.0 2,-0.2 -1,-0.2 0.921 112.3 47.6 -62.3 -37.4 14.3 5.3 17.7 16 16 A V H X S+ 0 0 3 -4,-1.9 4,-3.1 1,-0.2 5,-0.2 0.925 112.7 47.9 -66.5 -51.3 12.5 8.3 15.9 17 17 A S H X S+ 0 0 72 -4,-2.8 4,-2.4 -5,-0.2 -1,-0.2 0.903 111.4 50.0 -58.2 -39.1 12.3 10.4 19.1 18 18 A T H X S+ 0 0 77 -4,-2.3 4,-1.6 -5,-0.2 -1,-0.2 0.942 113.9 44.5 -68.1 -45.9 16.0 9.8 19.9 19 19 A A H X S+ 0 0 7 -4,-2.0 4,-2.4 -5,-0.2 5,-0.2 0.917 113.6 51.1 -66.5 -40.2 17.1 10.8 16.3 20 20 A Q H X S+ 0 0 21 -4,-3.1 4,-2.8 1,-0.2 5,-0.2 0.892 107.5 53.0 -62.2 -43.7 14.8 13.8 16.2 21 21 A A H X S+ 0 0 58 -4,-2.4 4,-2.0 -5,-0.2 -1,-0.2 0.914 111.8 45.1 -57.3 -44.3 16.2 15.0 19.5 22 22 A A H X S+ 0 0 28 -4,-1.6 4,-1.7 2,-0.2 -1,-0.2 0.911 114.1 47.9 -64.8 -47.8 19.8 14.9 18.3 23 23 A G H X S+ 0 0 0 -4,-2.4 4,-2.0 1,-0.2 -1,-0.2 0.869 110.5 51.1 -65.3 -41.6 19.1 16.5 15.0 24 24 A Y H X S+ 0 0 31 -4,-2.8 4,-2.4 -5,-0.2 -2,-0.2 0.909 107.1 55.5 -61.7 -37.1 17.0 19.4 16.5 25 25 A K H X S+ 0 0 106 -4,-2.0 4,-1.9 1,-0.2 -1,-0.2 0.894 107.0 47.7 -65.0 -42.3 19.8 20.1 19.0 26 26 A L H X>S+ 0 0 29 -4,-1.7 5,-2.5 1,-0.2 4,-0.5 0.912 110.1 54.6 -63.3 -40.1 22.4 20.5 16.1 27 27 A H H ><5S+ 0 0 42 -4,-2.0 3,-1.0 1,-0.2 -2,-0.2 0.889 108.8 47.7 -56.3 -48.8 19.8 22.9 14.3 28 28 A E H 3<5S+ 0 0 124 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.891 112.7 49.2 -61.3 -35.6 19.6 25.0 17.5 29 29 A D H 3<5S- 0 0 90 -4,-1.9 -1,-0.2 -5,-0.2 -2,-0.2 0.546 110.1-121.7 -78.1 -12.3 23.4 25.1 17.7 30 30 A G T <<5S+ 0 0 70 -3,-1.0 2,-0.3 -4,-0.5 -3,-0.2 0.792 70.7 131.1 70.8 35.0 23.8 26.1 14.0 31 31 A E < - 0 0 104 -5,-2.5 2,-0.3 -6,-0.1 -1,-0.2 -0.850 38.0-171.1-126.5 161.6 25.9 23.0 13.6 32 32 A T - 0 0 61 -2,-0.3 2,-0.3 -3,-0.1 5,-0.1 -0.929 6.8-153.5-143.6 165.5 26.1 20.0 11.2 33 33 A V B > +B 38 0B 38 5,-2.6 5,-2.2 -2,-0.3 37,-0.2 -0.977 50.0 38.2-139.9 149.2 27.8 16.8 10.8 34 34 A G T > 5S- 0 0 28 -2,-0.3 3,-1.7 35,-0.2 38,-0.1 0.063 90.3 -77.3 96.1 153.2 28.8 14.6 7.9 35 35 A S T 3 5S+ 0 0 108 1,-0.3 -1,-0.1 36,-0.3 37,-0.1 0.858 133.2 50.1 -59.9 -32.5 30.2 15.2 4.4 36 36 A N T 3 5S- 0 0 90 -3,-0.1 -1,-0.3 4,-0.0 -2,-0.1 0.216 112.8-119.6 -90.9 9.0 26.6 16.1 3.4 37 37 A S T < 5 - 0 0 53 -3,-1.7 -3,-0.2 1,-0.2 -2,-0.1 0.966 37.7-133.8 49.2 72.0 26.0 18.5 6.3 38 38 A Y B + 0 0 45 -2,-0.5 3,-1.4 1,-0.2 -2,-0.0 -0.356 46.4 145.3 -90.2 60.3 8.6 18.7 0.0 45 45 A Y T 3 + 0 0 135 -2,-1.8 -1,-0.2 1,-0.3 0, 0.0 0.726 68.6 63.5 -68.1 -19.3 8.5 18.7 -3.7 46 46 A E T 3 S- 0 0 77 -3,-0.4 -1,-0.3 1,-0.0 -2,-0.1 0.611 107.0-127.7 -80.4 -4.0 7.0 15.2 -3.6 47 47 A G < - 0 0 55 -3,-1.4 -2,-0.1 1,-0.1 -3,-0.1 0.851 35.7-177.9 70.1 33.2 4.0 16.6 -1.8 48 48 A F - 0 0 26 1,-0.1 2,-1.5 53,-0.0 -1,-0.1 -0.364 37.2-111.7 -61.7 147.8 3.8 14.3 1.3 49 49 A D + 0 0 107 2,-0.0 2,-0.5 0, 0.0 -1,-0.1 -0.683 47.2 172.0 -83.6 89.5 0.9 15.0 3.5 50 50 A F - 0 0 24 -2,-1.5 38,-0.1 1,-0.1 37,-0.1 -0.878 24.3-155.1 -97.3 134.5 2.8 16.4 6.5 51 51 A S S S+ 0 0 124 -2,-0.5 2,-0.3 36,-0.4 -1,-0.1 0.310 73.3 72.4 -92.3 8.7 0.3 17.8 9.0 52 52 A V S S- 0 0 19 35,-0.1 2,-0.1 33,-0.1 -2,-0.1 -0.860 87.6-106.9-116.2 151.4 2.9 20.2 10.6 53 53 A S - 0 0 83 -2,-0.3 29,-0.3 1,-0.1 30,-0.2 -0.425 41.8 -92.1 -83.6 157.3 4.2 23.4 8.8 54 54 A S S S+ 0 0 74 27,-0.1 2,-0.2 -2,-0.1 -1,-0.1 -0.152 77.9 104.4 -81.9-178.2 7.5 24.0 7.2 55 55 A P - 0 0 52 0, 0.0 27,-1.1 0, 0.0 2,-0.3 0.507 67.5-165.9 -56.4 154.3 10.3 25.0 7.2 56 56 A Y E -CD 42 81C 22 -14,-0.6 -14,-2.3 25,-0.2 2,-0.3 -0.813 10.9-164.8-118.6 154.5 11.3 21.3 7.4 57 57 A Y E -CD 41 80C 30 23,-2.7 23,-2.3 -16,-0.3 2,-0.4 -0.977 9.1-143.8-135.8 146.3 14.7 19.8 8.1 58 58 A E E +CD 40 79C 13 -18,-2.8 -18,-1.5 -2,-0.3 21,-0.2 -0.923 16.0 177.7-119.5 150.2 16.0 16.3 7.6 59 59 A W E - D 0 78C 4 19,-2.1 19,-2.7 -2,-0.4 2,-0.1 -0.990 36.5-102.3-144.8 134.0 18.4 14.1 9.8 60 60 A P E - D 0 77C 1 0, 0.0 8,-0.5 0, 0.0 2,-0.4 -0.356 24.8-158.7 -64.0 144.0 19.6 10.6 9.2 61 61 A I - 0 0 7 15,-1.4 15,-0.4 12,-0.2 2,-0.3 -0.965 18.9-142.0-115.1 128.8 17.9 7.8 11.3 62 62 A L > - 0 0 34 4,-0.6 3,-1.9 -2,-0.4 12,-0.1 -0.786 12.5-137.5-100.1 134.6 20.3 4.7 11.4 63 63 A S T 3 S+ 0 0 84 -2,-0.3 -53,-0.2 1,-0.3 -1,-0.1 0.758 102.5 66.6 -60.5 -24.6 19.0 1.1 11.3 64 64 A S T 3 S- 0 0 75 1,-0.1 -1,-0.3 2,-0.1 3,-0.1 0.535 109.8-118.6 -68.1 -21.2 21.6 0.2 14.0 65 65 A G S < S+ 0 0 44 -3,-1.9 2,-0.1 1,-0.4 -2,-0.1 0.221 74.0 128.2 95.6 -8.1 19.8 2.4 16.6 66 66 A D - 0 0 111 1,-0.1 -4,-0.6 -5,-0.0 -1,-0.4 -0.497 67.8-109.6 -78.8 152.9 23.0 4.6 16.9 67 67 A V - 0 0 64 -2,-0.1 2,-0.2 -3,-0.1 -6,-0.1 -0.658 43.3-102.0 -85.2 138.5 22.7 8.4 16.6 68 68 A Y + 0 0 9 -8,-0.5 -1,-0.1 -2,-0.4 3,-0.1 -0.333 46.5 168.9 -62.9 132.1 24.3 9.6 13.4 69 69 A S - 0 0 107 1,-0.5 -35,-0.2 -2,-0.2 2,-0.2 0.238 59.7 -63.4-131.0 15.9 27.7 11.1 13.9 70 70 A G S S+ 0 0 26 -37,-0.2 -1,-0.5 1,-0.1 2,-0.1 -0.628 95.9 80.9 120.6 174.3 29.3 11.5 10.4 71 71 A G S S- 0 0 57 -2,-0.2 -36,-0.3 -3,-0.1 -1,-0.1 -0.573 96.2 -5.4 85.6-176.1 30.1 8.7 8.1 72 72 A S - 0 0 101 1,-0.1 -2,-0.1 -2,-0.1 -38,-0.0 -0.514 56.1-160.0 -62.8 127.7 27.5 7.0 5.9 73 73 A P - 0 0 22 0, 0.0 3,-0.3 0, 0.0 -12,-0.2 0.475 25.1-147.3 -83.7 -7.7 24.0 8.4 6.5 74 74 A G - 0 0 44 1,-0.2 -12,-0.1 -14,-0.1 0, 0.0 -0.209 36.6 -70.4 69.9-166.1 22.3 5.4 5.0 75 75 A A S S+ 0 0 25 -14,-0.1 17,-2.2 -69,-0.1 18,-0.3 0.511 97.7 93.0-106.6 -6.0 19.0 6.1 3.2 76 76 A D E - E 0 91C 2 -15,-0.4 -15,-1.4 -3,-0.3 2,-0.3 -0.729 47.5-175.7 -99.5 147.9 16.5 6.9 6.0 77 77 A R E -DE 60 90C 6 13,-3.0 13,-2.0 -17,-0.3 2,-0.4 -0.971 22.8-144.6-142.7 151.2 15.6 10.2 7.4 78 78 A V E -DE 59 89C 0 -19,-2.7 -19,-2.1 -2,-0.3 2,-0.5 -0.877 23.4-152.6-105.1 142.6 13.5 11.9 10.1 79 79 A V E +DE 58 88C 0 9,-2.6 8,-3.2 -2,-0.4 9,-1.6 -0.996 20.3 169.3-117.6 128.2 11.9 15.2 9.1 80 80 A F E -DE 57 86C 0 -23,-2.3 -23,-2.7 -2,-0.5 6,-0.2 -0.867 22.0-129.6-132.8 168.0 11.1 17.8 11.7 81 81 A N E > -D 56 0C 2 4,-2.0 3,-1.6 -2,-0.3 -25,-0.2 -0.362 39.5 -84.1-106.9-174.1 10.1 21.5 11.5 82 82 A E T 3 S+ 0 0 70 -27,-1.1 -26,-0.1 -29,-0.3 -28,-0.1 0.732 125.8 54.1 -62.7 -23.9 11.3 24.7 13.1 83 83 A N T 3 S- 0 0 126 -30,-0.2 -1,-0.3 2,-0.1 3,-0.1 0.073 119.1-106.9 -96.4 18.9 9.2 24.0 16.3 84 84 A N S < S+ 0 0 65 -3,-1.6 2,-0.4 1,-0.2 -2,-0.1 0.909 71.8 146.4 57.8 39.1 10.7 20.6 16.8 85 85 A Q - 0 0 91 -32,-0.1 -4,-2.0 -4,-0.1 2,-0.3 -0.895 54.3-112.3-106.0 139.9 7.5 18.8 15.7 86 86 A L E +E 80 0C 56 -2,-0.4 -6,-0.2 -6,-0.2 3,-0.1 -0.577 31.9 179.6 -73.0 127.9 7.9 15.5 13.9 87 87 A A E - 0 0 16 -8,-3.2 -36,-0.4 1,-0.4 2,-0.3 0.860 55.1 -68.8 -98.9 -40.4 6.7 15.7 10.2 88 88 A G E -E 79 0C 11 -9,-1.6 -9,-2.6 -38,-0.1 2,-0.4 -0.956 38.3 -93.9 172.2-177.6 7.4 12.1 9.1 89 89 A V E +E 78 0C 5 -2,-0.3 14,-2.4 -11,-0.2 2,-0.3 -0.997 45.6 171.4-125.6 119.1 10.0 9.4 8.3 90 90 A I E -EF 77 102C 0 -13,-2.0 -13,-3.0 -2,-0.4 2,-0.3 -0.804 12.7-157.2-127.5 172.7 11.0 9.0 4.7 91 91 A T E -EF 76 101C 1 10,-3.0 10,-2.7 -2,-0.3 -15,-0.2 -0.997 29.4-140.2-151.6 152.8 13.6 7.1 2.8 92 92 A H S > S+ 0 0 44 -17,-2.2 3,-2.1 -2,-0.3 7,-0.1 0.604 74.2 112.7 -80.6 -18.0 15.6 7.1 -0.5 93 93 A T T 3 S+ 0 0 63 1,-0.3 -86,-0.2 -18,-0.3 -2,-0.1 -0.339 87.9 8.5 -59.8 128.4 15.1 3.2 -0.5 94 94 A G T 3 S+ 0 0 78 1,-0.3 2,-0.4 -2,-0.1 -1,-0.3 0.627 109.4 105.3 76.5 12.8 12.8 2.3 -3.4 95 95 A A S < S- 0 0 23 -3,-2.1 -1,-0.3 4,-0.2 2,-0.1 -0.939 78.3-104.0-124.3 145.0 12.9 5.8 -4.9 96 96 A S S > S- 0 0 92 -2,-0.4 3,-2.3 4,-0.1 -3,-0.0 -0.491 75.7 -34.4 -73.9 144.7 14.9 6.8 -8.0 97 97 A G T 3 S- 0 0 70 1,-0.3 -2,-0.2 -2,-0.1 0, 0.0 -0.241 125.5 -19.4 53.3-128.6 18.1 8.7 -7.5 98 98 A N T 3 S+ 0 0 121 2,-0.1 -1,-0.3 0, 0.0 -2,-0.1 0.054 108.2 112.0 -99.9 18.1 18.0 11.1 -4.6 99 99 A N < - 0 0 47 -3,-2.3 2,-0.3 -7,-0.1 -4,-0.2 -0.268 56.5-135.5 -80.8 178.7 14.2 11.2 -4.4 100 100 A F - 0 0 14 -6,-0.1 2,-0.3 -2,-0.0 -8,-0.2 -0.937 16.9-162.8-136.4 166.1 12.2 9.8 -1.5 101 101 A V E -F 91 0C 59 -10,-2.7 -10,-3.0 -2,-0.3 2,-0.2 -0.919 39.0-100.2-132.0 161.9 9.1 7.7 -0.6 102 102 A E E -F 90 0C 86 -2,-0.3 -12,-0.3 -12,-0.2 2,-0.2 -0.562 31.1-115.8 -87.2 153.5 7.5 7.7 2.9 103 103 A b 0 0 16 -14,-2.4 -97,-0.2 -2,-0.2 -14,-0.2 -0.557 360.0 360.0 -76.9 153.6 8.2 4.9 5.4 104 104 A T 0 0 139 -99,-2.5 -98,-0.1 -2,-0.2 -1,-0.1 0.509 360.0 360.0-112.1 360.0 5.1 2.9 6.3