==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA-BINDING PROTEIN 25-APR-95 1SAP . COMPND 2 MOLECULE: SAC7D; . SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS ACIDOCALDARIUS; . AUTHOR S.P.EDMONDSON,J.W.SHRIVER . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4679.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 43 65.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 31.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 7.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 12.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 18.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 195 0, 0.0 4,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 21.4 -6.1 -11.7 -6.9 2 2 A V + 0 0 72 2,-0.1 2,-0.2 51,-0.1 0, 0.0 0.079 360.0 112.5-135.1 24.1 -4.5 -8.3 -6.4 3 3 A K S S- 0 0 90 13,-0.1 2,-0.8 1,-0.1 13,-0.2 -0.443 89.3 -78.9 -69.9 167.5 -6.5 -6.3 -3.9 4 4 A V E -A 15 0A 3 11,-3.1 11,-1.9 -2,-0.2 2,-0.3 -0.680 44.5-160.6 -90.2 107.2 -4.2 -6.0 -0.9 5 5 A K E +A 14 0A 102 -2,-0.8 9,-0.2 9,-0.2 2,-0.2 -0.692 38.3 119.3 -78.7 135.9 -4.2 -9.0 1.4 6 6 A F E -A 13 0A 17 7,-2.6 7,-2.4 -2,-0.3 2,-0.3 -0.759 59.1 -78.1-165.9-149.5 -2.9 -8.2 5.0 7 7 A K E +A 12 0A 136 37,-0.3 2,-0.3 5,-0.3 37,-0.2 -0.998 50.8 134.4-141.3 135.1 -4.2 -8.3 8.6 8 8 A Y E > +A 11 0A 86 3,-2.2 3,-2.5 -2,-0.3 35,-0.1 -0.931 59.3 36.7-167.9 169.1 -6.6 -5.9 10.6 9 9 A K T 3 S- 0 0 119 1,-0.3 3,-0.1 -2,-0.3 0, 0.0 0.725 129.4 -65.8 46.5 29.7 -9.6 -6.2 13.0 10 10 A G T 3 S+ 0 0 84 1,-0.3 -1,-0.3 3,-0.0 2,-0.3 0.801 122.2 71.6 63.1 33.6 -7.9 -9.3 14.5 11 11 A E E < S-A 8 0A 133 -3,-2.5 -3,-2.2 0, 0.0 -1,-0.3 -0.904 96.7 -68.8-152.1-179.1 -8.3 -11.3 11.2 12 12 A E E -A 7 0A 88 -2,-0.3 2,-0.4 -5,-0.2 -5,-0.3 -0.518 53.4-158.9 -70.9 148.1 -7.0 -11.5 7.6 13 13 A K E -A 6 0A 22 -7,-2.4 -7,-2.6 -2,-0.2 2,-0.4 -0.998 15.7-163.3-139.6 138.1 -8.1 -8.4 5.6 14 14 A E E -A 5 0A 91 -2,-0.4 2,-0.4 -9,-0.2 -9,-0.2 -0.984 15.5-170.8-118.3 128.1 -8.4 -7.8 1.8 15 15 A V E -A 4 0A 2 -11,-1.9 -11,-3.1 -2,-0.4 2,-0.3 -0.989 12.9-142.4-128.0 136.3 -8.6 -4.1 0.6 16 16 A D > - 0 0 78 -2,-0.4 3,-2.4 -13,-0.2 4,-0.4 -0.659 28.7-114.0 -90.0 150.7 -9.4 -2.6 -2.8 17 17 A T G > S+ 0 0 62 1,-0.3 3,-1.5 -2,-0.3 -1,-0.1 0.777 111.4 74.3 -48.6 -37.1 -7.6 0.5 -4.2 18 18 A S G 3 S+ 0 0 98 1,-0.3 -1,-0.3 3,-0.0 -3,-0.0 0.798 105.8 38.3 -48.1 -32.1 -11.0 2.3 -4.0 19 19 A K G < S+ 0 0 83 -3,-2.4 16,-2.1 16,-0.1 -1,-0.3 0.495 87.0 115.7 -97.0 -10.5 -10.4 2.4 -0.2 20 20 A I E < +B 34 0B 31 -3,-1.5 14,-0.3 -4,-0.4 3,-0.1 -0.503 33.7 177.0 -78.1 134.2 -6.6 3.0 -0.1 21 21 A K E - 0 0 148 12,-2.3 2,-0.3 1,-0.4 13,-0.2 0.781 61.2 -15.5-104.5 -40.7 -5.6 6.4 1.5 22 22 A K E -B 33 0B 115 11,-2.3 11,-2.1 2,-0.0 -1,-0.4 -0.957 49.3-163.7-161.9 152.5 -1.8 6.4 1.6 23 23 A V E +B 32 0B 16 -2,-0.3 2,-0.3 9,-0.3 9,-0.3 -0.980 25.2 143.2-141.6 140.5 1.2 4.0 1.3 24 24 A W E -B 31 0B 73 7,-2.9 7,-2.9 -2,-0.3 2,-0.7 -0.922 51.8 -88.2-156.9 173.2 4.8 4.7 2.4 25 25 A R E -B 30 0B 60 -2,-0.3 2,-2.1 5,-0.2 5,-0.2 -0.881 21.6-156.2 -93.3 113.7 7.8 2.9 4.0 26 26 A V E > -B 29 0B 63 3,-2.4 3,-1.9 -2,-0.7 2,-1.4 -0.561 62.6 -87.6 -78.3 73.1 7.9 2.9 7.8 27 27 A G T 3 S+ 0 0 64 -2,-2.1 -1,-0.1 1,-0.3 4,-0.0 -0.382 118.2 13.0 62.6 -90.4 11.6 2.4 7.5 28 28 A K T 3 S+ 0 0 184 -2,-1.4 19,-0.3 -3,-0.0 -1,-0.3 0.835 125.0 58.7 -79.1 -42.8 11.7 -1.4 7.3 29 29 A M E < S-B 26 0B 64 -3,-1.9 -3,-2.4 17,-0.1 2,-0.5 -0.644 82.0-114.2-105.1 152.0 8.0 -2.1 6.7 30 30 A V E -BC 25 45B 0 15,-2.5 15,-2.0 -2,-0.2 2,-0.4 -0.745 41.8-171.1 -78.5 123.0 5.5 -1.2 4.0 31 31 A S E +BC 24 44B 0 -7,-2.9 -7,-2.9 -2,-0.5 2,-0.3 -0.958 9.6 168.0-119.3 135.1 2.9 1.0 5.9 32 32 A F E -BC 23 43B 0 11,-2.9 11,-2.3 -2,-0.4 2,-0.4 -0.956 29.8-138.9-136.3 161.9 -0.4 2.2 4.5 33 33 A T E +BC 22 42B 34 -11,-2.1 -12,-2.3 -2,-0.3 -11,-2.3 -0.964 29.3 177.2-110.6 137.9 -3.6 3.8 5.6 34 34 A Y E -B 20 0B 0 7,-1.9 7,-0.4 -2,-0.4 2,-0.3 -0.866 24.0-116.1-131.4 164.9 -6.7 2.3 3.9 35 35 A D - 0 0 37 -16,-2.1 2,-0.4 -2,-0.3 5,-0.2 -0.763 13.8-163.6-105.0 149.8 -10.4 3.1 4.5 36 36 A D B > S-D 39 0C 38 3,-3.1 3,-2.0 -2,-0.3 -21,-0.0 -0.910 76.9 -41.9-131.4 106.0 -13.3 1.0 5.8 37 37 A N T 3 S- 0 0 122 -2,-0.4 3,-0.1 1,-0.3 -18,-0.0 0.761 124.5 -37.6 44.8 41.0 -16.7 2.5 5.0 38 38 A G T 3 S+ 0 0 60 1,-0.4 -1,-0.3 -19,-0.1 2,-0.2 -0.071 121.0 94.9 108.4 -30.7 -15.6 6.0 5.8 39 39 A K B < S-D 36 0C 104 -3,-2.0 -3,-3.1 1,-0.1 -1,-0.4 -0.615 71.9-124.5 -86.4 155.1 -13.3 5.5 8.8 40 40 A T + 0 0 80 -5,-0.2 2,-0.3 -2,-0.2 -5,-0.2 -0.053 28.3 178.9 -81.5-167.5 -9.6 5.1 8.2 41 41 A G - 0 0 10 -7,-0.4 -7,-1.9 -6,-0.1 2,-0.4 -0.866 25.6-114.8 172.0 159.1 -7.3 2.2 9.3 42 42 A R E -C 33 0B 134 -2,-0.3 2,-0.3 -9,-0.3 -9,-0.3 -0.944 27.8-178.8-115.9 132.3 -3.6 1.2 9.1 43 43 A G E +C 32 0B 3 -11,-2.3 -11,-2.9 -2,-0.4 2,-0.3 -0.844 5.1 174.3-122.3 163.1 -2.3 -1.8 7.1 44 44 A A E -C 31 0B 20 -2,-0.3 -37,-0.3 -13,-0.2 2,-0.3 -0.971 9.0-178.6-164.4 158.0 1.3 -3.0 6.7 45 45 A V E -C 30 0B 7 -15,-2.0 -15,-2.5 -2,-0.3 2,-0.4 -0.957 29.0-116.6-150.6 160.9 3.4 -5.9 5.3 46 46 A S > - 0 0 37 -2,-0.3 3,-2.6 -17,-0.2 -17,-0.1 -0.910 35.2-117.0 -99.1 138.1 7.0 -7.0 5.0 47 47 A E G > S+ 0 0 78 -2,-0.4 3,-2.4 -19,-0.3 -1,-0.1 0.783 110.1 66.1 -39.1 -49.0 8.4 -7.1 1.4 48 48 A K G 3 S+ 0 0 182 1,-0.3 -1,-0.3 -3,-0.0 0, 0.0 0.718 116.0 28.3 -51.5 -29.0 9.1 -10.9 1.6 49 49 A D G < S+ 0 0 82 -3,-2.6 -1,-0.3 2,-0.1 -2,-0.2 -0.044 92.5 113.3-126.3 29.2 5.3 -11.4 1.8 50 50 A A < - 0 0 7 -3,-2.4 5,-0.1 -5,-0.1 -44,-0.1 -0.858 60.4-141.7-104.1 94.6 4.1 -8.3 -0.1 51 51 A P >> - 0 0 58 0, 0.0 4,-1.6 0, 0.0 3,-1.1 -0.137 29.9 -91.7 -57.6 153.8 2.4 -9.4 -3.4 52 52 A K H 3> S+ 0 0 161 1,-0.3 4,-3.3 2,-0.2 5,-0.1 0.687 117.0 51.8 -43.7 -52.6 2.9 -7.4 -6.6 53 53 A E H 3> S+ 0 0 40 2,-0.2 4,-2.4 1,-0.2 -1,-0.3 0.918 111.2 49.5 -60.2 -38.5 -0.1 -4.8 -6.6 54 54 A L H <> S+ 0 0 8 -3,-1.1 4,-2.5 1,-0.2 -1,-0.2 0.944 114.5 46.4 -61.5 -44.3 0.7 -3.7 -3.1 55 55 A L H X S+ 0 0 59 -4,-1.6 4,-2.2 2,-0.2 -2,-0.2 0.940 106.8 57.9 -58.8 -48.3 4.3 -3.3 -4.2 56 56 A D H X S+ 0 0 67 -4,-3.3 4,-1.6 2,-0.2 -2,-0.2 0.896 111.0 41.8 -54.6 -47.3 3.2 -1.5 -7.5 57 57 A M H X S+ 0 0 57 -4,-2.4 4,-1.2 1,-0.2 3,-0.2 0.976 122.4 39.8 -63.5 -52.9 1.4 1.2 -5.5 58 58 A L H X S+ 0 0 1 -4,-2.5 4,-3.3 -5,-0.2 -2,-0.2 0.733 108.4 69.5 -60.5 -19.3 4.3 1.4 -2.9 59 59 A A H X S+ 0 0 21 -4,-2.2 4,-3.0 2,-0.2 5,-0.3 0.933 96.8 45.1 -79.3 -47.9 6.7 1.0 -5.8 60 60 A R H X S+ 0 0 131 -4,-1.6 4,-2.7 -3,-0.2 -1,-0.2 0.953 118.3 47.9 -55.2 -46.2 6.3 4.3 -7.5 61 61 A A H X S+ 0 0 15 -4,-1.2 4,-2.7 -5,-0.2 -2,-0.2 0.954 115.5 42.2 -56.5 -57.3 6.5 5.9 -4.0 62 62 A E H X S+ 0 0 40 -4,-3.3 4,-3.1 2,-0.2 -2,-0.2 0.909 116.5 47.1 -62.1 -47.9 9.6 4.0 -2.9 63 63 A R H < S+ 0 0 164 -4,-3.0 -1,-0.2 2,-0.2 -2,-0.2 0.939 113.2 49.7 -60.3 -48.1 11.5 4.4 -6.2 64 64 A E H < S+ 0 0 159 -4,-2.7 -2,-0.2 -5,-0.3 -1,-0.2 0.929 115.7 42.6 -55.1 -50.3 10.6 8.1 -6.3 65 65 A K H < 0 0 107 -4,-2.7 -2,-0.2 1,-0.3 -1,-0.2 0.923 360.0 360.0 -62.2 -47.3 11.8 8.5 -2.7 66 66 A K < 0 0 177 -4,-3.1 -1,-0.3 -5,-0.2 -2,-0.2 -0.007 360.0 360.0 -95.7 360.0 14.9 6.3 -3.3