==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 22-MAR-04 1SRK . COMPND 2 MOLECULE: ZINC FINGER PROTEIN ZFPM1; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR R.J.Y.SIMPSON,S.H.Y.LEE,N.BARTLE,J.M.MATTHEWS,J.P.MACKAY, . 35 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2954.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 20 57.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 8.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 11.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 14.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 20.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 137 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-140.5 -16.0 -5.4 9.3 2 2 A S - 0 0 103 1,-0.5 2,-0.2 2,-0.0 18,-0.1 0.175 360.0 -28.0-174.8 -42.1 -12.3 -6.2 8.9 3 3 A S S S+ 0 0 45 1,-0.1 -1,-0.5 16,-0.1 16,-0.2 -0.790 76.1 105.3-162.4-152.9 -11.1 -5.4 5.4 4 4 A G + 0 0 53 -2,-0.2 2,-0.3 1,-0.2 15,-0.3 0.962 63.6 118.4 61.2 52.7 -12.4 -5.2 1.8 5 5 A K - 0 0 135 13,-2.5 3,-0.4 12,-0.2 -1,-0.2 -0.937 69.4-116.9-151.2 158.9 -12.4 -1.4 1.5 6 6 A R S S+ 0 0 178 -2,-0.3 2,-0.6 1,-0.2 11,-0.2 0.771 94.6 76.6 -75.1 -31.7 -10.8 1.3 -0.5 7 7 A P + 0 0 96 0, 0.0 2,-0.9 0, 0.0 -1,-0.2 0.131 62.1 112.8 -72.3 28.2 -8.7 3.4 2.1 8 8 A F E +A 17 0A 30 -2,-0.6 9,-1.7 9,-0.5 2,-0.2 -0.415 45.2 164.7 -94.3 53.2 -6.1 0.6 2.1 9 9 A V E -A 16 0A 69 -2,-0.9 7,-0.3 7,-0.3 6,-0.1 -0.499 46.0 -91.5 -77.3 142.7 -3.4 2.8 0.5 10 10 A C - 0 0 4 5,-1.9 -1,-0.1 -2,-0.2 6,-0.1 -0.266 22.7-141.9 -56.4 137.6 0.1 1.6 0.7 11 11 A R S S+ 0 0 197 1,-0.1 -1,-0.1 -3,-0.1 -2,-0.1 0.815 100.7 34.6 -65.8 -36.7 2.1 2.8 3.7 12 12 A I S S+ 0 0 95 3,-0.1 -1,-0.1 0, 0.0 -2,-0.0 0.941 134.4 6.5 -88.8 -55.8 5.3 3.2 1.5 13 13 A C S S- 0 0 43 2,-0.1 -4,-0.0 0, 0.0 0, 0.0 0.365 89.5 -98.6 -95.2-128.5 4.0 4.3 -1.8 14 14 A L + 0 0 146 -5,-0.1 2,-0.6 2,-0.0 -3,-0.1 -0.003 64.1 139.7-153.7 36.2 0.3 5.2 -2.6 15 15 A S - 0 0 48 -6,-0.1 -5,-1.9 8,-0.0 2,-0.4 -0.705 42.9-144.7 -83.3 122.3 -1.1 2.1 -4.2 16 16 A A E -A 9 0A 32 -2,-0.6 2,-0.3 -7,-0.3 -7,-0.3 -0.723 17.2-168.9 -90.4 135.7 -4.6 1.5 -2.9 17 17 A F E -A 8 0A 43 -9,-1.7 -9,-0.5 -2,-0.4 -12,-0.2 -0.926 27.4-133.9-125.0 149.9 -5.7 -2.1 -2.3 18 18 A T S S+ 0 0 83 -2,-0.3 -13,-2.5 -14,-0.1 2,-0.4 0.901 91.6 32.6 -64.7 -45.9 -9.1 -3.6 -1.6 19 19 A T S >> S- 0 0 44 -15,-0.3 4,-1.4 -16,-0.2 3,-0.8 -0.913 74.5-128.1-119.2 148.0 -7.9 -5.9 1.1 20 20 A K H 3> S+ 0 0 134 -2,-0.4 4,-2.4 1,-0.3 5,-0.1 0.828 109.6 64.9 -53.9 -37.4 -5.2 -5.6 3.7 21 21 A A H 3> S+ 0 0 70 1,-0.2 4,-1.9 2,-0.2 -1,-0.3 0.893 99.6 50.5 -59.0 -38.9 -3.9 -8.9 2.6 22 22 A N H <> S+ 0 0 32 -3,-0.8 4,-2.2 1,-0.2 -1,-0.2 0.914 110.1 50.0 -63.6 -43.2 -3.1 -7.5 -0.8 23 23 A C H X S+ 0 0 24 -4,-1.4 4,-1.7 1,-0.2 -2,-0.2 0.881 107.1 56.1 -62.4 -39.8 -1.2 -4.6 0.8 24 24 A A H X S+ 0 0 69 -4,-2.4 4,-0.5 2,-0.2 3,-0.3 0.940 111.2 40.9 -59.5 -50.7 0.8 -7.0 3.0 25 25 A R H >< S+ 0 0 175 -4,-1.9 3,-0.9 1,-0.2 4,-0.3 0.887 113.4 56.4 -66.6 -36.0 2.1 -9.1 0.0 26 26 A H H >< S+ 0 0 24 -4,-2.2 3,-2.0 1,-0.2 4,-0.4 0.811 90.6 74.4 -57.4 -41.6 2.7 -5.9 -1.9 27 27 A L H >< S+ 0 0 62 -4,-1.7 3,-1.6 -3,-0.3 -1,-0.2 0.793 80.5 70.0 -48.4 -37.7 4.9 -4.5 0.9 28 28 A K G XX S+ 0 0 112 -3,-0.9 4,-2.8 -4,-0.5 3,-0.6 0.767 84.2 71.1 -53.3 -32.0 7.8 -6.8 -0.0 29 29 A V G <4 S+ 0 0 9 -3,-2.0 2,-1.2 1,-0.3 -1,-0.3 0.824 81.6 73.7 -56.1 -35.3 8.4 -4.8 -3.3 30 30 A H G <4 S+ 0 0 58 -3,-1.6 -1,-0.3 -4,-0.4 -2,-0.1 -0.063 122.5 2.3 -77.7 42.2 9.7 -1.8 -1.3 31 31 A T T <4 S+ 0 0 130 -2,-1.2 -2,-0.2 -3,-0.6 -1,-0.2 0.020 131.3 51.5 175.9 -45.2 13.0 -3.6 -0.5 32 32 A D S < S- 0 0 107 -4,-2.8 2,-0.3 1,-0.3 -3,-0.2 0.994 123.9 -38.5 -72.2 -66.8 13.1 -7.0 -2.2 33 33 A T - 0 0 89 -5,-0.4 2,-0.3 0, 0.0 -1,-0.3 -0.928 58.5-111.2-163.2 136.8 12.2 -6.1 -5.8 34 34 A L 0 0 134 -2,-0.3 -4,-0.1 1,-0.2 -6,-0.0 -0.552 360.0 360.0 -76.1 132.1 9.8 -3.6 -7.3 35 35 A S 0 0 144 -2,-0.3 -1,-0.2 -9,-0.2 -9,-0.0 0.254 360.0 360.0-161.9 360.0 6.8 -5.2 -9.1