==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 23-MAR-04 1SRZ . COMPND 2 MOLECULE: GAMMA-AMINOBUTYRIC ACID TYPE B RECEPTOR, SUBUNIT . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR S.BLEIN,D.UHRIN,B.O.SMITH,J.H.WHITE,P.N.BARLOW . 68 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4952.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 40 58.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 19 27.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 14.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 11.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 92 A E 0 0 215 0, 0.0 5,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-148.2 21.8 -3.9 -7.5 2 93 A A - 0 0 69 1,-0.1 2,-0.2 4,-0.0 4,-0.1 -0.234 360.0 -91.5 55.8-139.8 18.0 -3.9 -8.2 3 94 A E - 0 0 165 2,-0.2 -1,-0.1 1,-0.1 2,-0.1 -0.841 67.5 -28.4-173.8 133.7 17.0 -2.0 -11.3 4 95 A F S S+ 0 0 188 -2,-0.2 2,-0.3 2,-0.1 -1,-0.1 -0.336 121.5 23.2 57.7-129.0 15.9 1.5 -12.3 5 96 A V S S- 0 0 76 1,-0.1 2,-1.5 2,-0.1 -2,-0.2 -0.513 74.0-138.2 -71.1 128.9 14.2 3.2 -9.3 6 97 A R S S+ 0 0 130 -2,-0.3 23,-0.6 20,-0.1 2,-0.3 -0.222 74.2 93.0 -80.7 47.6 15.2 1.6 -6.0 7 98 A I S S- 0 0 33 -2,-1.5 3,-0.2 49,-0.2 23,-0.1 -0.999 81.6-103.2-145.3 141.2 11.6 1.8 -4.7 8 99 A a - 0 0 1 -2,-0.3 49,-0.2 21,-0.3 48,-0.1 -0.185 69.9 -61.9 -57.3 149.3 8.6 -0.5 -4.7 9 100 A S > - 0 0 64 47,-0.3 3,-1.3 1,-0.2 4,-0.3 -0.063 44.8-153.4 -38.3 113.5 6.0 0.2 -7.3 10 101 A K G >> S+ 0 0 147 1,-0.3 3,-1.2 -3,-0.2 4,-0.7 0.649 83.2 86.9 -67.2 -14.3 4.7 3.7 -6.5 11 102 A S G >4 S+ 0 0 60 1,-0.3 3,-0.9 2,-0.2 -1,-0.3 0.861 76.6 65.1 -53.5 -38.9 1.4 2.7 -8.1 12 103 A Y G <4 S+ 0 0 41 -3,-1.3 -1,-0.3 1,-0.3 -2,-0.2 0.856 89.9 66.9 -53.3 -37.9 0.3 1.2 -4.7 13 104 A L G <4 S+ 0 0 65 -3,-1.2 7,-0.8 -4,-0.3 2,-0.4 0.895 97.7 59.0 -50.9 -45.4 0.4 4.7 -3.3 14 105 A T E << +A 19 0A 99 -3,-0.9 2,-0.3 -4,-0.7 5,-0.1 -0.755 67.6 168.4 -92.5 131.3 -2.6 5.7 -5.6 15 106 A L E > -A 18 0A 26 3,-0.7 3,-1.4 -2,-0.4 2,-0.2 -0.987 38.5-111.6-145.3 132.3 -5.8 3.8 -5.3 16 107 A E T 3 S- 0 0 147 -2,-0.3 49,-0.2 1,-0.3 3,-0.1 -0.417 103.9 -3.1 -63.0 127.0 -9.3 4.4 -6.6 17 108 A N T 3 S+ 0 0 74 -2,-0.2 23,-1.5 1,-0.2 -1,-0.3 0.915 126.8 80.3 55.1 45.7 -11.7 5.2 -3.8 18 109 A G E < -AB 15 39A 11 -3,-1.4 -3,-0.7 21,-0.3 2,-0.4 -0.965 64.1-139.4-173.0 157.4 -8.9 4.7 -1.3 19 110 A K E -AB 14 38A 145 19,-2.3 19,-0.8 -2,-0.3 2,-0.4 -0.983 13.7-143.6-130.6 139.7 -5.8 6.1 0.4 20 111 A V E - B 0 37A 20 -7,-0.8 2,-1.2 -2,-0.4 17,-0.2 -0.873 7.0-145.9-106.5 132.9 -2.4 4.5 1.2 21 112 A F E - B 0 36A 115 15,-1.8 15,-1.0 -2,-0.4 13,-0.1 -0.609 27.6-169.5 -94.8 73.4 -0.5 5.4 4.4 22 113 A L - 0 0 87 -2,-1.2 13,-0.2 13,-0.2 11,-0.0 -0.166 13.4-177.7 -60.9 157.0 3.1 5.1 3.0 23 114 A T + 0 0 93 2,-0.1 11,-0.9 12,-0.0 -1,-0.1 -0.392 60.8 56.8-158.5 69.5 6.0 5.1 5.5 24 115 A G - 0 0 28 9,-0.3 2,-0.6 7,-0.0 3,-0.2 0.291 66.3-159.6-163.0 -44.9 9.4 4.9 3.8 25 116 A G - 0 0 45 1,-0.2 -2,-0.1 5,-0.1 -3,-0.0 -0.767 59.1 -40.3 91.4-121.8 10.0 7.6 1.2 26 117 A D S S+ 0 0 129 -2,-0.6 -1,-0.2 -19,-0.1 -20,-0.1 -0.268 80.3 147.4-144.8 52.0 12.7 7.0 -1.4 27 118 A L - 0 0 98 -3,-0.2 6,-0.1 1,-0.2 -2,-0.0 -0.502 65.6 -63.4 -88.1 158.1 15.6 5.3 0.4 28 119 A P S > S- 0 0 107 0, 0.0 2,-1.3 0, 0.0 3,-0.8 -0.158 117.1 -25.1 -44.0 111.0 17.9 2.6 -1.3 29 120 A A T 3 S- 0 0 14 -23,-0.6 27,-2.5 1,-0.2 -21,-0.3 -0.004 89.9-120.9 70.8 -33.5 15.6 -0.3 -2.1 30 121 A L T > + 0 0 12 -2,-1.3 2,-2.2 1,-0.2 3,-0.7 0.913 44.5 174.9 64.3 43.9 13.3 0.9 0.7 31 122 A D T < S+ 0 0 103 -3,-0.8 23,-0.2 1,-0.2 -1,-0.2 -0.358 72.0 39.0 -79.4 59.1 13.6 -2.3 2.6 32 123 A G T 3 S+ 0 0 50 -2,-2.2 -1,-0.2 21,-0.4 22,-0.1 0.281 77.5 123.6-172.3 -29.5 11.7 -1.0 5.6 33 124 A A < - 0 0 5 -3,-0.7 20,-1.5 19,-0.1 2,-0.4 -0.085 40.5-160.8 -49.7 147.5 8.8 1.1 4.4 34 125 A R E - C 0 52A 108 -11,-0.9 2,-0.5 18,-0.2 18,-0.2 -0.991 4.3-164.1-138.7 126.8 5.3 0.1 5.5 35 126 A V E - C 0 51A 1 16,-2.0 16,-1.7 -2,-0.4 2,-0.7 -0.944 8.1-152.1-116.7 130.3 2.0 1.1 3.9 36 127 A E E -BC 21 50A 105 -15,-1.0 -15,-1.8 -2,-0.5 14,-0.2 -0.868 16.1-148.0-102.5 109.8 -1.4 0.8 5.5 37 128 A F E +B 20 0A 10 12,-2.4 2,-0.3 -2,-0.7 -17,-0.2 -0.452 22.6 169.6 -75.5 147.1 -4.2 0.4 2.9 38 129 A R E -B 19 0A 125 -19,-0.8 -19,-2.3 -2,-0.1 2,-0.2 -0.884 23.5-140.0-162.3 125.9 -7.6 1.8 3.7 39 130 A b E -B 18 0A 10 -2,-0.3 -21,-0.3 -21,-0.2 6,-0.1 -0.603 36.6 -93.0 -89.3 149.1 -10.8 2.2 1.5 40 131 A D > - 0 0 55 -23,-1.5 2,-3.2 -2,-0.2 3,-1.0 0.015 54.9 -80.9 -52.6 163.3 -13.0 5.3 1.7 41 132 A P T 3 S+ 0 0 123 0, 0.0 -1,-0.2 0, 0.0 3,-0.1 -0.246 126.7 48.8 -67.6 57.3 -16.1 5.3 4.1 42 133 A D T 3 S+ 0 0 100 -2,-3.2 26,-1.3 1,-0.5 2,-0.4 0.272 103.4 53.0-158.1 -43.3 -18.2 3.4 1.5 43 134 A F E < S-D 67 0B 64 -3,-1.0 2,-0.5 24,-0.2 -1,-0.5 -0.875 73.1-138.3-108.9 138.8 -16.1 0.4 0.4 44 135 A H E -D 66 0B 80 22,-2.5 22,-1.7 -2,-0.4 2,-0.1 -0.850 20.8-120.7-101.6 127.5 -14.5 -2.1 2.8 45 136 A L E -D 65 0B 20 -2,-0.5 20,-0.2 20,-0.2 2,-0.1 -0.422 30.0-179.3 -65.0 131.2 -11.0 -3.3 2.1 46 137 A V + 0 0 67 18,-1.5 2,-0.2 -2,-0.1 -1,-0.1 -0.495 53.7 21.8-133.4 65.4 -10.9 -7.1 1.7 47 138 A G S S+ 0 0 47 16,-0.1 2,-2.9 -2,-0.1 3,-0.1 -0.789 111.9 8.6-179.3-135.6 -7.3 -8.2 1.1 48 139 A S + 0 0 20 13,-0.3 -11,-0.2 -2,-0.2 12,-0.1 -0.352 59.4 164.9 -73.4 62.1 -3.7 -7.1 1.5 49 140 A S + 0 0 61 -2,-2.9 -12,-2.4 13,-0.1 2,-0.4 0.576 68.2 47.5 -57.6 -7.0 -4.7 -4.2 3.7 50 141 A R E +C 36 0A 144 -14,-0.2 2,-0.3 -3,-0.1 -14,-0.2 -0.998 62.6 171.0-140.6 134.4 -1.0 -4.2 4.7 51 142 A S E -C 35 0A 1 -16,-1.7 -16,-2.0 -2,-0.4 2,-0.6 -0.942 18.7-150.9-146.4 119.5 2.2 -4.3 2.5 52 143 A V E -C 34 0A 41 -2,-0.3 7,-1.7 -18,-0.2 -18,-0.2 -0.813 20.4-130.8 -96.0 121.6 5.7 -3.8 3.7 53 144 A a E +E 58 0C 0 -20,-1.5 -21,-0.4 -2,-0.6 2,-0.3 -0.436 37.8 159.5 -69.2 138.3 8.1 -2.5 1.1 54 145 A S E > +E 57 0C 30 3,-2.0 3,-1.4 -23,-0.2 -23,-0.2 -0.908 58.2 2.8-164.5 133.1 11.4 -4.4 0.7 55 146 A Q T 3 S- 0 0 134 -2,-0.3 -25,-0.2 1,-0.3 -26,-0.1 0.880 128.0 -58.9 57.4 40.8 14.1 -4.8 -1.9 56 147 A G T 3 S+ 0 0 22 -27,-2.5 2,-0.3 -50,-0.3 -47,-0.3 0.684 124.7 92.9 63.9 18.3 12.3 -2.3 -4.1 57 148 A Q E < S-E 54 0C 141 -3,-1.4 -3,-2.0 -49,-0.2 2,-0.2 -0.999 78.2-114.1-145.3 139.8 9.3 -4.5 -4.1 58 149 A W E -E 53 0C 16 -2,-0.3 -5,-0.2 -5,-0.2 -24,-0.0 -0.475 20.3-135.6 -72.1 139.0 6.1 -4.8 -1.9 59 150 A S S S+ 0 0 72 -7,-1.7 -1,-0.1 -2,-0.2 -8,-0.1 0.969 89.8 30.0 -57.5 -57.7 5.8 -7.9 0.2 60 151 A T S S- 0 0 44 -12,-0.1 -1,-0.1 -10,-0.1 -2,-0.0 -0.851 93.0-106.0-109.4 143.1 2.1 -8.5 -0.7 61 152 A P - 0 0 90 0, 0.0 -13,-0.3 0, 0.0 -1,-0.0 -0.255 49.8 -83.4 -63.0 148.1 0.3 -7.6 -4.0 62 153 A K - 0 0 71 1,-0.1 -13,-0.1 -15,-0.1 -50,-0.0 -0.214 49.0-146.8 -53.3 135.6 -2.1 -4.6 -4.0 63 154 A P - 0 0 17 0, 0.0 2,-0.3 0, 0.0 -16,-0.1 0.204 10.6-116.3 -85.4-151.9 -5.6 -5.5 -2.8 64 155 A H - 0 0 108 -20,-0.1 -18,-1.5 -49,-0.0 2,-0.5 -0.994 12.5-119.5-153.7 151.1 -9.0 -4.1 -3.9 65 156 A b E -D 45 0B 30 -2,-0.3 2,-0.4 -20,-0.2 -20,-0.2 -0.812 25.1-156.9 -97.3 129.8 -12.0 -2.2 -2.4 66 157 A Q E -D 44 0B 96 -22,-1.7 -22,-2.5 -2,-0.5 2,-0.1 -0.885 20.9-115.2-108.8 135.4 -15.4 -3.9 -2.3 67 158 A V E D 43 0B 80 -2,-0.4 -24,-0.2 -24,-0.2 -1,-0.0 -0.387 360.0 360.0 -66.8 140.2 -18.7 -2.0 -2.1 68 159 A N 0 0 157 -26,-1.3 -1,-0.1 -2,-0.1 -25,-0.1 0.705 360.0 360.0 -59.7 360.0 -20.7 -2.6 1.0