==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL ADHESION 30-JAN-96 1SUH . COMPND 2 MOLECULE: EPITHELIAL CADHERIN; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR M.OVERDUIN,K.I.TONG,C.M.KAY,M.IKURA . 104 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6542.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 59.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 10 9.6 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 26 25.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A D 0 0 156 0, 0.0 2,-1.5 0, 0.0 29,-0.0 0.000 360.0 360.0 360.0 148.9 10.7 -12.5 -5.1 2 2 A W + 0 0 56 25,-0.1 2,-0.1 1,-0.1 27,-0.1 -0.604 360.0 117.7 -81.3 90.3 7.5 -10.9 -6.4 3 3 A V + 0 0 104 -2,-1.5 23,-0.1 1,-0.1 24,-0.1 -0.575 24.9 111.0-156.7 87.1 5.0 -11.9 -3.7 4 4 A I + 0 0 83 21,-0.4 21,-0.2 22,-0.2 -1,-0.1 -0.547 28.1 179.6-162.3 89.0 3.3 -9.2 -1.7 5 5 A P + 0 0 91 0, 0.0 90,-1.4 0, 0.0 2,-0.1 0.903 69.7 73.1 -58.7 -43.7 -0.4 -8.5 -2.1 6 6 A P E +a 95 0A 75 0, 0.0 2,-0.3 0, 0.0 90,-0.2 -0.449 65.0 179.9 -74.6 145.4 -0.5 -5.7 0.5 7 7 A I E -a 96 0A 24 88,-1.8 90,-2.9 -2,-0.1 2,-0.4 -0.888 20.7-130.2-139.4 169.4 1.1 -2.3 -0.4 8 8 A S E -a 97 0A 56 -2,-0.3 90,-0.2 88,-0.2 65,-0.0 -0.988 17.1-176.4-129.4 132.8 1.7 1.1 1.2 9 9 A C E -a 98 0A 0 88,-2.7 90,-1.2 -2,-0.4 65,-0.1 -0.975 22.0-131.4-130.8 120.9 1.0 4.5 -0.3 10 10 A P E -a 99 0A 31 0, 0.0 56,-1.1 0, 0.0 2,-0.3 -0.087 22.2-132.0 -61.9 166.3 1.8 7.8 1.4 11 11 A E B S+e 66 0B 10 88,-0.7 56,-0.2 54,-0.2 91,-0.2 -0.873 76.4 15.2-122.9 155.6 -0.7 10.6 1.8 12 12 A N S S- 0 0 67 54,-2.1 -1,-0.2 -2,-0.3 2,-0.1 0.829 79.1-176.8 55.1 32.4 -0.6 14.4 1.1 13 13 A E - 0 0 49 -3,-0.2 2,-0.4 53,-0.1 -1,-0.2 -0.414 5.6-162.1 -64.0 132.6 2.6 13.8 -0.9 14 14 A K + 0 0 156 -3,-0.1 2,-0.2 -2,-0.1 -1,-0.0 -0.950 44.8 67.7-121.2 138.6 3.9 17.2 -2.2 15 15 A G S S- 0 0 63 -2,-0.4 2,-0.5 4,-0.0 4,-0.0 -0.762 94.5 -9.6 162.7-110.9 6.4 17.8 -5.0 16 16 A E S S- 0 0 159 -2,-0.2 -2,-0.0 2,-0.0 0, 0.0 -0.935 76.5-117.3-127.3 110.4 5.9 17.2 -8.7 17 17 A F S S+ 0 0 79 -2,-0.5 2,-0.2 2,-0.1 46,-0.1 -0.724 93.4 45.7 -97.9 147.9 2.8 15.4 -9.9 18 18 A P S S+ 0 0 82 0, 0.0 2,-0.3 0, 0.0 45,-0.2 0.557 88.0 175.6 -68.3 155.8 2.3 12.9 -11.3 19 19 A K E -F 62 0C 45 43,-2.6 43,-2.8 -2,-0.2 2,-0.1 -0.969 30.7-112.7-134.4 150.0 4.8 11.2 -9.0 20 20 A N E +F 61 0C 73 -2,-0.3 41,-0.3 41,-0.3 3,-0.1 -0.404 30.7 171.2 -75.7 154.1 6.0 7.7 -8.4 21 21 A L E - 0 0 34 39,-2.5 2,-0.3 1,-0.3 40,-0.2 0.613 56.3 -14.0-127.8 -60.3 5.2 5.8 -5.2 22 22 A V E -F 60 0C 42 38,-1.5 38,-2.7 36,-0.1 -1,-0.3 -0.999 61.3-108.3-151.9 152.4 6.1 2.1 -5.2 23 23 A Q E -F 59 0C 49 -2,-0.3 2,-0.2 36,-0.2 36,-0.2 -0.449 35.8-123.6 -78.4 153.1 7.1 -0.6 -7.6 24 24 A I - 0 0 6 34,-1.9 2,-0.4 33,-0.2 -1,-0.1 -0.636 19.2-163.5 -97.9 156.6 4.7 -3.4 -8.4 25 25 A K + 0 0 100 -2,-0.2 -21,-0.4 -21,-0.2 33,-0.0 -0.963 12.7 167.8-141.7 122.1 5.3 -7.1 -8.0 26 26 A S - 0 0 10 -2,-0.4 -22,-0.2 8,-0.1 -1,-0.0 0.443 34.3-122.4-100.3-121.3 3.2 -10.0 -9.6 27 27 A N S > S+ 0 0 75 -24,-0.1 3,-0.6 -26,-0.0 -25,-0.1 0.289 93.6 73.1-158.4 -47.8 4.1 -13.6 -9.7 28 28 A R G >> S+ 0 0 46 1,-0.3 3,-2.2 60,-0.1 4,-1.4 0.648 72.5 98.3 -56.4 -8.9 4.3 -14.9 -13.3 29 29 A D G 34 + 0 0 51 1,-0.3 -1,-0.3 2,-0.2 4,-0.1 0.290 66.5 75.2 -65.0 17.5 7.4 -12.9 -13.4 30 30 A K G <4 S+ 0 0 156 -3,-0.6 -1,-0.3 2,-0.1 -2,-0.1 0.337 105.7 26.5-109.7 3.4 9.1 -16.3 -12.7 31 31 A E T <4 S+ 0 0 139 -3,-2.2 2,-0.3 1,-0.4 -2,-0.2 0.548 129.4 5.3-134.1 -30.6 8.7 -17.6 -16.3 32 32 A T S < S- 0 0 42 -4,-1.4 -1,-0.4 52,-0.0 2,-0.2 -0.967 86.3 -85.2-159.9 141.4 8.5 -14.6 -18.6 33 33 A K - 0 0 146 -2,-0.3 50,-2.9 49,-0.1 2,-0.4 -0.256 54.0-157.9 -48.9 109.1 8.9 -10.8 -18.4 34 34 A V E -B 82 0A 6 48,-0.2 48,-0.2 -2,-0.2 2,-0.2 -0.796 5.6-151.6 -99.9 135.6 5.4 -9.9 -17.3 35 35 A F E -B 81 0A 46 46,-4.0 46,-2.2 -2,-0.4 21,-0.2 -0.639 16.6-127.3 -98.2 160.2 3.9 -6.4 -17.9 36 36 A Y E -B 80 0A 5 19,-1.2 2,-0.3 18,-0.3 44,-0.2 -0.549 20.3-176.9-108.3 172.7 1.2 -4.8 -15.7 37 37 A S E -B 79 0A 34 42,-0.7 42,-1.6 -2,-0.2 2,-0.3 -0.960 12.4-149.5-159.5 148.1 -2.2 -3.1 -16.1 38 38 A I E +B 78 0A 41 -2,-0.3 2,-0.3 40,-0.2 40,-0.2 -0.956 18.2 162.1-132.3 150.7 -4.6 -1.5 -13.7 39 39 A T E +B 77 0A 45 38,-2.8 38,-2.3 -2,-0.3 2,-0.2 -0.977 30.9 70.4-160.0 146.8 -8.3 -1.0 -13.3 40 40 A G S >>>S- 0 0 8 -2,-0.3 3,-2.6 36,-0.2 4,-1.4 -0.687 87.2 -20.3 131.7 174.5 -10.8 -0.1 -10.6 41 41 A Q B 345S+h 45 0D 59 1,-0.3 7,-0.1 -2,-0.2 34,-0.1 -0.274 128.3 36.6 -53.2 130.5 -11.8 2.9 -8.5 42 42 A G T 345S+ 0 0 5 3,-2.7 9,-2.4 5,-0.5 8,-2.0 0.052 126.5 38.7 111.9 -22.9 -8.9 5.4 -8.5 43 43 A A T <45S- 0 0 22 -3,-2.6 6,-1.1 6,-0.2 -2,-0.2 0.668 139.6 -6.8-118.9 -67.9 -8.1 4.6 -12.2 44 44 A D T <5S+ 0 0 85 -4,-1.4 -3,-0.2 4,-0.2 4,-0.2 0.695 124.5 64.5-105.9 -27.3 -11.2 4.1 -14.3 45 45 A K B - 0 0 35 5,-1.9 4,-2.3 -2,-0.4 -18,-0.3 -0.735 15.1-156.6 -87.0 106.9 3.8 1.4 -15.8 55 55 A R T 4 S+ 0 0 141 -2,-0.9 -19,-1.2 2,-0.2 26,-0.2 0.694 91.5 48.3 -55.9 -15.7 2.9 -1.8 -17.6 56 56 A E T 4 S+ 0 0 105 -21,-0.2 -1,-0.2 3,-0.1 27,-0.1 0.936 128.7 13.6 -89.9 -69.3 6.6 -2.1 -18.3 57 57 A T T 4 S- 0 0 73 2,-0.1 -33,-0.2 -22,-0.1 -2,-0.2 0.747 96.0-127.3 -80.0 -22.3 8.6 -1.5 -15.1 58 58 A G < + 0 0 0 -4,-2.3 -34,-1.9 1,-0.2 2,-0.4 0.718 46.9 166.8 83.5 20.2 5.4 -1.9 -13.0 59 59 A W E -F 23 0C 96 -36,-0.2 -5,-1.9 -5,-0.2 2,-0.9 -0.558 30.7-141.0 -72.5 124.3 6.1 1.4 -11.3 60 60 A L E +FG 22 53C 1 -38,-2.7 -39,-2.5 -2,-0.4 -38,-1.5 -0.773 32.0 166.9 -90.9 109.3 3.1 2.6 -9.4 61 61 A K E -FG 20 52C 49 -9,-2.8 -9,-3.5 -2,-0.9 2,-0.3 -0.800 16.1-157.5-117.8 160.4 2.7 6.3 -9.7 62 62 A V E -FG 19 51C 1 -43,-2.8 -43,-2.6 -2,-0.3 -11,-0.2 -0.986 23.6-152.4-141.2 151.0 -0.2 8.6 -8.9 63 63 A T S S+ 0 0 51 -13,-2.8 -12,-0.1 -2,-0.3 -1,-0.1 0.675 93.3 39.6 -90.3 -20.7 -1.5 12.0 -9.9 64 64 A Q S S- 0 0 100 -14,-1.2 -1,-0.2 -45,-0.1 -15,-0.0 -0.991 81.8-132.7-133.8 127.9 -3.2 12.5 -6.6 65 65 A P - 0 0 44 0, 0.0 -54,-0.2 0, 0.0 2,-0.2 0.020 32.1 -99.0 -65.2 179.4 -1.8 11.5 -3.1 66 66 A L B -e 11 0B 1 -56,-1.1 -54,-2.1 33,-0.1 2,-0.3 -0.503 25.5-148.5 -98.3 170.5 -3.9 9.7 -0.5 67 67 A D >> - 0 0 61 4,-0.3 4,-2.8 -56,-0.2 3,-1.8 -0.854 11.4-161.3-145.3 108.4 -5.7 11.1 2.5 68 68 A R T 34 S+ 0 0 149 -2,-0.3 -1,-0.1 1,-0.3 5,-0.1 0.845 96.2 63.0 -55.1 -32.4 -6.3 9.2 5.8 69 69 A E T 34 S+ 0 0 168 1,-0.1 -1,-0.3 -3,-0.1 3,-0.1 0.817 117.9 27.3 -63.4 -27.6 -9.1 11.7 6.5 70 70 A A T <4 S+ 0 0 69 -3,-1.8 2,-0.4 1,-0.3 -2,-0.2 0.882 137.1 1.3 -97.8 -58.0 -10.9 10.3 3.5 71 71 A I < - 0 0 66 -4,-2.8 -1,-0.3 1,-0.1 -4,-0.3 -0.997 45.2-166.3-136.7 138.9 -9.7 6.8 3.0 72 72 A A S S+ 0 0 62 -2,-0.4 26,-2.8 1,-0.3 2,-0.3 0.607 84.1 24.1 -96.8 -13.7 -7.3 4.7 5.1 73 73 A K E - C 0 97A 111 24,-0.3 2,-0.3 -5,-0.1 -1,-0.3 -0.898 66.7-157.4-155.8 122.7 -6.9 1.9 2.5 74 74 A Y E - C 0 96A 27 22,-2.7 22,-3.1 -2,-0.3 2,-0.4 -0.719 8.9-155.6 -99.7 150.3 -7.4 1.9 -1.3 75 75 A I E + C 0 95A 76 -2,-0.3 2,-0.3 20,-0.2 20,-0.2 -0.984 15.8 170.1-128.1 135.6 -8.1 -1.2 -3.4 76 76 A L E - C 0 94A 5 18,-2.8 18,-2.8 -2,-0.4 2,-0.3 -0.906 24.0-131.5-138.3 166.1 -7.4 -1.7 -7.1 77 77 A Y E -BC 39 93A 112 -38,-2.3 -38,-2.8 -2,-0.3 2,-0.3 -0.904 23.0-168.8-118.8 148.6 -7.4 -4.6 -9.6 78 78 A S E -BC 38 92A 4 14,-2.6 14,-1.5 -2,-0.3 2,-0.3 -0.949 12.1-149.1-139.0 160.2 -4.6 -5.4 -12.1 79 79 A H E -B 37 0A 60 -42,-1.6 -42,-0.7 -2,-0.3 2,-0.4 -0.912 13.1-143.8-124.7 151.5 -3.9 -7.6 -15.1 80 80 A A E -B 36 0A 0 -2,-0.3 8,-1.2 -44,-0.2 2,-0.3 -0.927 15.5-179.6-120.2 143.2 -0.7 -9.2 -16.3 81 81 A V E -BD 35 87A 49 -46,-2.2 -46,-4.0 -2,-0.4 2,-0.6 -0.971 31.1-112.4-137.1 151.1 0.7 -9.7 -19.9 82 82 A S E > -B 34 0A 5 4,-2.5 3,-2.6 -2,-0.3 4,-0.3 -0.735 18.9-136.7 -87.6 123.9 3.8 -11.3 -21.3 83 83 A S T 3 S+ 0 0 60 -50,-2.9 -1,-0.1 -2,-0.6 -49,-0.1 0.517 103.1 68.7 -55.1 1.5 6.2 -8.8 -22.9 84 84 A N T 3 S- 0 0 78 -51,-0.3 -1,-0.3 2,-0.2 3,-0.1 0.753 124.7 -93.7 -92.5 -26.3 6.4 -11.5 -25.6 85 85 A G S < S+ 0 0 70 -3,-2.6 2,-0.5 1,-0.4 -2,-0.1 0.279 90.2 115.2 129.8 -5.0 2.9 -11.2 -26.9 86 86 A E - 0 0 131 -4,-0.3 -4,-2.5 2,-0.0 -1,-0.4 -0.837 64.6-126.9 -99.3 125.4 1.1 -13.9 -24.8 87 87 A A B +D 81 0A 73 -2,-0.5 -6,-0.2 -6,-0.2 -53,-0.0 -0.477 33.4 167.2 -70.8 135.6 -1.5 -12.7 -22.3 88 88 A V + 0 0 23 -8,-1.2 -7,-0.2 -2,-0.2 -60,-0.1 -0.060 27.0 139.4-137.9 32.1 -0.9 -13.9 -18.7 89 89 A E + 0 0 96 -10,-0.1 -10,-0.1 -7,-0.0 -8,-0.1 -0.366 23.5 177.0 -79.0 159.7 -3.4 -11.7 -16.9 90 90 A D - 0 0 66 -12,-0.3 2,-1.2 -2,-0.1 -12,-0.2 -0.974 48.3 -80.4-159.7 147.4 -5.6 -12.9 -14.1 91 91 A P + 0 0 124 0, 0.0 2,-0.5 0, 0.0 -12,-0.1 -0.281 61.3 175.1 -53.7 90.3 -8.1 -11.3 -11.7 92 92 A M E - C 0 78A 40 -14,-1.5 -14,-2.6 -2,-1.2 2,-0.7 -0.898 20.7-152.9-107.1 127.7 -5.5 -9.8 -9.3 93 93 A E E - C 0 77A 126 -2,-0.5 2,-0.6 -16,-0.2 -16,-0.2 -0.859 7.7-158.2-102.2 114.9 -6.6 -7.6 -6.4 94 94 A I E - C 0 76A 22 -18,-2.8 -18,-2.8 -2,-0.7 2,-0.6 -0.797 4.5-154.0 -94.1 123.9 -4.0 -5.1 -5.2 95 95 A V E -aC 6 75A 41 -90,-1.4 -88,-1.8 -2,-0.6 2,-0.6 -0.851 9.7-171.1 -99.9 122.6 -4.5 -3.8 -1.7 96 96 A I E -aC 7 74A 0 -22,-3.1 -22,-2.7 -2,-0.6 2,-0.3 -0.928 3.4-164.9-116.6 112.6 -3.0 -0.4 -0.9 97 97 A T E -aC 8 73A 52 -90,-2.9 -88,-2.7 -2,-0.6 -24,-0.3 -0.658 20.7-119.8 -93.4 150.5 -2.9 0.8 2.7 98 98 A V E -a 9 0A 15 -26,-2.8 2,-0.3 -2,-0.3 -26,-0.0 -0.610 27.9-166.2 -89.0 150.1 -2.3 4.4 3.6 99 99 A T E -a 10 0A 57 -90,-1.2 -88,-0.7 -2,-0.2 -31,-0.1 -0.977 33.8 -85.9-136.1 149.4 0.6 5.4 5.8 100 100 A D - 0 0 87 -2,-0.3 4,-0.1 -90,-0.1 -88,-0.0 -0.236 55.3-108.5 -52.1 131.8 1.6 8.6 7.7 101 101 A Q - 0 0 27 1,-0.2 -89,-0.1 2,-0.1 -1,-0.1 0.067 42.0 -85.5 -53.7 173.7 3.4 11.0 5.3 102 102 A N S S+ 0 0 135 -91,-0.2 2,-0.7 -3,-0.1 -1,-0.2 0.602 110.6 95.6 -60.9 -5.7 7.1 11.5 5.7 103 103 A D 0 0 85 0, 0.0 -2,-0.1 0, 0.0 -1,-0.0 -0.775 360.0 360.0 -91.2 115.1 6.0 14.1 8.3 104 104 A N 0 0 163 -2,-0.7 -2,-0.0 -4,-0.1 0, 0.0 -0.952 360.0 360.0-173.2 360.0 6.0 12.7 11.8