==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 22-SEP-98 1T1D . COMPND 2 MOLECULE: PROTEIN (POTASSIUM CHANNEL KV1.1); . SOURCE 2 ORGANISM_SCIENTIFIC: APLYSIA CALIFORNICA; . AUTHOR A.KREUSCH,P.J.PFAFFINGER,C.F.STEVENS,S.CHOE . 100 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6016.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 76 76.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 10.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 17 17.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 32.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 66 A E 0 0 157 0, 0.0 15,-2.6 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 120.6 9.9 31.7 107.7 2 67 A R E -A 15 0A 158 13,-0.2 2,-0.4 14,-0.1 13,-0.2 -0.687 360.0-160.8 -81.6 134.8 13.5 31.3 106.3 3 68 A V E -A 14 0A 9 11,-3.0 11,-2.0 -2,-0.4 2,-0.5 -0.935 6.3-151.1-115.7 137.2 14.4 27.9 104.8 4 69 A V E -A 13 0A 31 -2,-0.4 40,-2.6 38,-0.3 2,-0.6 -0.950 9.1-169.3-111.7 121.7 18.0 26.6 104.3 5 70 A I E -Ab 12 44A 1 7,-2.9 7,-2.9 -2,-0.5 2,-0.8 -0.969 6.7-159.8-110.9 112.1 18.4 24.2 101.4 6 71 A N E -Ab 11 45A 8 38,-2.9 40,-2.6 -2,-0.6 2,-0.9 -0.874 7.1-173.3 -98.3 107.7 21.9 22.5 101.4 7 72 A V E > S-Ab 10 46A 0 3,-2.8 3,-2.6 -2,-0.8 40,-0.2 -0.872 76.0 -40.7-101.8 97.8 22.8 21.1 98.0 8 73 A S T 3 S- 0 0 37 38,-2.0 -1,-0.2 -2,-0.9 3,-0.1 0.821 124.0 -41.3 55.4 37.4 26.0 19.2 98.4 9 74 A G T 3 S+ 0 0 40 1,-0.2 2,-0.7 37,-0.1 -1,-0.3 0.232 114.7 114.3 95.2 -13.9 27.4 22.0 100.7 10 75 A L E < -A 7 0A 63 -3,-2.6 -3,-2.8 2,-0.0 2,-0.4 -0.875 58.9-148.5 -92.2 114.7 26.1 24.9 98.7 11 76 A R E -A 6 0A 122 -2,-0.7 2,-0.4 -5,-0.2 -5,-0.2 -0.691 15.3-172.9 -93.5 128.3 23.5 26.6 100.9 12 77 A F E -A 5 0A 20 -7,-2.9 -7,-2.9 -2,-0.4 2,-0.4 -0.886 6.5-158.7-113.2 147.1 20.5 28.3 99.4 13 78 A E E +A 4 0A 107 -2,-0.4 2,-0.3 -9,-0.2 -9,-0.2 -0.990 22.4 144.8-128.6 141.9 18.1 30.4 101.5 14 79 A T E -A 3 0A 10 -11,-2.0 -11,-3.0 -2,-0.4 2,-0.4 -0.867 46.7 -89.4-155.6-179.4 14.5 31.4 100.7 15 80 A Q E >> -A 2 0A 71 -2,-0.3 4,-1.3 -13,-0.2 3,-0.8 -0.814 30.6-122.8 -97.9 150.6 11.2 31.9 102.3 16 81 A L H 3> S+ 0 0 40 -15,-2.6 4,-3.0 -2,-0.4 3,-0.5 0.920 112.9 59.5 -56.7 -40.1 8.6 29.1 102.9 17 82 A K H 3> S+ 0 0 104 1,-0.3 4,-0.9 -16,-0.2 -1,-0.3 0.838 99.5 57.8 -57.2 -35.2 6.1 31.2 100.9 18 83 A T H <4 S+ 0 0 30 -3,-0.8 3,-0.3 2,-0.2 -1,-0.3 0.929 113.1 37.7 -63.1 -42.1 8.4 31.2 97.9 19 84 A L H >< S+ 0 0 0 -4,-1.3 3,-1.7 -3,-0.5 -2,-0.2 0.891 110.2 61.4 -74.1 -39.3 8.4 27.4 97.8 20 85 A N H 3< S+ 0 0 66 -4,-3.0 -1,-0.2 1,-0.3 -2,-0.2 0.631 82.7 78.3 -67.1 -13.7 4.8 26.9 98.8 21 86 A Q T 3< S+ 0 0 89 -4,-0.9 -1,-0.3 -3,-0.3 -2,-0.1 0.742 97.2 47.6 -68.7 -20.1 3.5 28.7 95.7 22 87 A F S X S+ 0 0 53 -3,-1.7 3,-0.6 -4,-0.2 6,-0.3 -0.726 71.7 168.8-115.1 81.4 4.2 25.6 93.6 23 88 A P T 3 + 0 0 69 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.710 65.7 67.0 -69.9 -20.3 2.6 22.9 95.9 24 89 A D T 3 S+ 0 0 142 -3,-0.1 2,-0.3 62,-0.1 3,-0.1 -0.280 89.3 82.8 -96.0 42.5 2.7 20.1 93.4 25 90 A T S <> S- 0 0 3 -3,-0.6 4,-0.7 -2,-0.3 60,-0.2 -0.889 91.6-105.8-132.3 168.1 6.5 20.0 93.4 26 91 A L T >4 S+ 0 0 4 58,-2.0 3,-1.2 -2,-0.3 7,-0.8 0.977 119.9 39.1 -61.1 -54.7 9.0 18.3 95.8 27 92 A L T 34 S+ 0 0 1 57,-0.5 -1,-0.2 1,-0.3 -8,-0.1 0.762 114.5 54.3 -72.6 -18.2 10.1 21.5 97.5 28 93 A G T 34 S+ 0 0 2 -6,-0.3 -1,-0.3 1,-0.1 -2,-0.2 0.502 96.9 74.2 -89.6 -6.2 6.6 23.0 97.5 29 94 A N XX - 0 0 42 -3,-1.2 4,-3.1 -4,-0.7 3,-1.1 -0.942 67.5-155.8-112.2 110.9 5.1 20.0 99.3 30 95 A P H 3> S+ 0 0 44 0, 0.0 4,-2.5 0, 0.0 5,-0.2 0.898 94.7 57.4 -48.7 -42.3 5.9 19.7 103.0 31 96 A Q H 34 S+ 0 0 139 2,-0.2 4,-0.3 1,-0.2 -5,-0.1 0.850 115.6 34.9 -60.3 -36.2 5.3 15.9 102.9 32 97 A K H X4 S+ 0 0 82 -3,-1.1 3,-1.2 -6,-0.2 4,-0.3 0.917 118.4 49.1 -84.7 -47.1 7.9 15.4 100.1 33 98 A R H >< S+ 0 0 12 -4,-3.1 3,-2.1 -7,-0.8 4,-0.2 0.865 102.3 64.0 -64.1 -32.9 10.4 18.1 101.2 34 99 A N G >< S+ 0 0 76 -4,-2.5 3,-1.3 -5,-0.4 -1,-0.3 0.766 86.2 70.7 -68.1 -14.1 10.4 16.9 104.8 35 100 A R G < S+ 0 0 198 -3,-1.2 -1,-0.3 -4,-0.3 -2,-0.2 0.734 101.8 48.4 -65.9 -21.1 11.9 13.5 103.7 36 101 A Y G < S+ 0 0 81 -3,-2.1 9,-2.5 -4,-0.3 -1,-0.3 0.380 82.1 126.1-103.3 7.4 15.0 15.6 103.1 37 102 A Y E < -C 44 0A 91 -3,-1.3 7,-0.2 7,-0.2 3,-0.1 -0.377 49.4-150.4 -70.2 136.9 15.1 17.4 106.4 38 103 A D E >> -C 43 0A 25 5,-3.1 4,-1.7 1,-0.1 5,-1.1 -0.920 6.5-166.6-108.1 101.5 18.4 17.2 108.4 39 104 A P T 45S+ 0 0 106 0, 0.0 -1,-0.1 0, 0.0 5,-0.0 0.770 84.2 58.6 -64.4 -24.0 17.5 17.5 112.1 40 105 A L T 45S+ 0 0 136 1,-0.2 -3,-0.0 -3,-0.1 -2,-0.0 0.848 121.1 24.6 -73.6 -33.5 21.1 18.0 113.2 41 106 A R T 45S- 0 0 135 -3,-0.5 -1,-0.2 2,-0.2 3,-0.1 0.437 97.3-125.4-111.2 -1.6 21.5 21.1 111.0 42 107 A N T <5S+ 0 0 109 -4,-1.7 -38,-0.3 1,-0.2 2,-0.3 0.951 74.6 108.7 54.2 53.3 17.9 22.4 110.6 43 108 A E E > S+ 0 0 107 1,-0.2 3,-1.4 2,-0.1 4,-0.5 0.947 79.5 57.0 -83.7 -47.9 25.1 22.0 92.5 51 116 A P T 34 S+ 0 0 58 0, 0.0 3,-0.5 0, 0.0 4,-0.4 0.801 102.0 58.2 -64.2 -22.5 25.1 24.2 89.4 52 117 A S T >> S+ 0 0 0 1,-0.2 4,-1.3 2,-0.1 3,-0.8 0.822 90.0 74.0 -72.0 -25.8 21.6 23.2 88.4 53 118 A F H <> S+ 0 0 0 -3,-1.4 4,-2.8 -4,-0.4 5,-0.4 0.818 80.6 67.2 -67.0 -29.6 20.1 24.4 91.7 54 119 A D H 3X S+ 0 0 113 -4,-0.5 4,-2.2 -3,-0.5 -1,-0.2 0.943 107.9 43.1 -47.2 -46.9 20.3 28.2 91.0 55 120 A A H <> S+ 0 0 8 -3,-0.8 4,-1.6 -4,-0.4 -1,-0.2 0.796 109.0 55.8 -73.6 -31.5 17.7 27.6 88.3 56 121 A I H X S+ 0 0 0 -4,-1.3 4,-1.0 2,-0.2 3,-0.2 0.953 112.9 42.2 -69.0 -43.2 15.5 25.3 90.4 57 122 A L H >X S+ 0 0 10 -4,-2.8 4,-2.0 1,-0.2 3,-0.7 0.939 111.6 54.8 -68.8 -40.7 15.2 28.0 93.1 58 123 A Y H 3X S+ 0 0 97 -4,-2.2 4,-2.7 -5,-0.4 7,-0.3 0.819 95.5 68.0 -63.6 -29.2 14.8 30.8 90.6 59 124 A F H 3<>S+ 0 0 6 -4,-1.6 5,-2.8 1,-0.2 6,-0.4 0.923 108.7 38.2 -52.6 -42.9 11.8 28.8 89.1 60 125 A Y H X<5S+ 0 0 0 -4,-1.0 3,-1.3 -3,-0.7 -2,-0.2 0.911 115.7 51.0 -72.8 -43.2 10.0 29.5 92.3 61 126 A Q H 3<5S+ 0 0 103 -4,-2.0 -2,-0.2 1,-0.3 -1,-0.2 0.868 112.4 46.6 -65.0 -35.3 11.3 33.1 92.8 62 127 A S T 3<5S- 0 0 40 -4,-2.7 -1,-0.3 3,-0.2 -2,-0.2 0.303 115.2-112.7 -87.7 -2.1 10.3 34.1 89.3 63 128 A G T < 5S- 0 0 44 -3,-1.3 -3,-0.2 1,-0.2 -4,-0.1 0.757 89.6 -21.2 72.9 30.6 6.8 32.5 89.5 64 129 A G S - 0 0 25 0, 0.0 3,-0.8 0, 0.0 8,-0.1 -0.261 19.1-127.5 -57.7 149.4 22.3 27.4 83.2 70 135 A V T 3 S+ 0 0 135 1,-0.2 -2,-0.0 3,-0.0 0, 0.0 0.800 106.2 62.1 -78.1 -24.7 24.8 27.2 80.4 71 136 A N T 3 S+ 0 0 120 -20,-0.1 -1,-0.2 1,-0.1 -19,-0.1 0.449 96.8 75.4 -75.3 0.7 27.5 25.6 82.5 72 137 A V S < S- 0 0 2 -3,-0.8 -1,-0.1 -21,-0.1 5,-0.0 -0.951 83.1-125.9-123.1 119.9 25.1 22.6 83.0 73 138 A P > - 0 0 66 0, 0.0 4,-2.8 0, 0.0 5,-0.3 -0.174 22.5-111.5 -66.5 153.7 24.4 20.1 80.2 74 139 A L H > S+ 0 0 60 1,-0.2 4,-2.4 2,-0.2 5,-0.1 0.848 114.6 45.6 -48.2 -53.1 21.0 19.2 78.9 75 140 A D H > S+ 0 0 105 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.913 112.8 50.7 -68.0 -39.3 20.8 15.6 80.3 76 141 A V H > S+ 0 0 38 2,-0.2 4,-1.9 1,-0.2 -2,-0.2 0.943 114.7 44.0 -58.2 -52.3 22.1 16.7 83.8 77 142 A F H X S+ 0 0 0 -4,-2.8 4,-2.6 1,-0.2 5,-0.2 0.924 109.7 56.1 -62.9 -39.8 19.6 19.5 84.0 78 143 A S H X S+ 0 0 19 -4,-2.4 4,-1.9 -5,-0.3 -1,-0.2 0.914 106.6 50.4 -59.8 -42.1 16.7 17.3 82.7 79 144 A E H X S+ 0 0 117 -4,-2.2 4,-2.4 1,-0.2 -1,-0.2 0.893 110.3 50.5 -65.7 -37.0 17.4 14.7 85.4 80 145 A E H X S+ 0 0 10 -4,-1.9 4,-2.6 2,-0.2 -2,-0.2 0.928 107.7 50.3 -69.7 -39.2 17.3 17.5 88.1 81 146 A I H <>S+ 0 0 4 -4,-2.6 5,-1.7 1,-0.2 4,-0.4 0.932 112.6 49.0 -64.8 -34.2 14.0 19.0 86.9 82 147 A K H ><5S+ 0 0 132 -4,-1.9 3,-1.2 -5,-0.2 -1,-0.2 0.948 110.8 50.2 -65.4 -45.4 12.4 15.5 87.0 83 148 A F H 3<5S+ 0 0 45 -4,-2.4 -2,-0.2 1,-0.3 -1,-0.2 0.907 111.2 47.6 -59.4 -44.2 13.8 14.9 90.5 84 149 A Y T 3<5S- 0 0 0 -4,-2.6 -58,-2.0 -5,-0.2 -57,-0.5 0.519 107.4-132.4 -78.8 -2.3 12.5 18.1 91.8 85 150 A E T < 5 + 0 0 75 -3,-1.2 -3,-0.2 -4,-0.4 -2,-0.1 0.911 37.7 172.0 54.8 55.1 9.1 17.3 90.2 86 151 A L < - 0 0 14 -5,-1.7 4,-0.3 1,-0.2 -1,-0.1 0.692 47.6-105.4 -72.3 -14.4 8.6 20.7 88.6 87 152 A G > - 0 0 37 -6,-0.2 4,-2.6 2,-0.1 -1,-0.2 -0.061 20.3 -89.7 108.5 151.4 5.6 19.4 86.6 88 153 A E H > S+ 0 0 134 2,-0.2 4,-2.7 1,-0.2 5,-0.2 0.871 122.4 59.8 -68.5 -31.0 4.7 18.4 83.1 89 154 A N H > S+ 0 0 60 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.941 111.4 39.9 -58.6 -49.8 3.7 22.0 82.2 90 155 A A H > S+ 0 0 3 -4,-0.3 4,-2.5 1,-0.2 -2,-0.2 0.917 113.7 54.0 -67.6 -40.6 7.2 23.2 83.1 91 156 A F H X S+ 0 0 36 -4,-2.6 4,-2.6 1,-0.2 -2,-0.2 0.861 107.4 52.4 -63.3 -35.2 8.8 20.2 81.4 92 157 A E H X S+ 0 0 118 -4,-2.7 4,-2.5 2,-0.2 -1,-0.2 0.957 109.2 48.0 -62.9 -51.2 6.9 20.9 78.2 93 158 A R H X S+ 0 0 110 -4,-1.9 4,-2.6 1,-0.2 -2,-0.2 0.944 113.4 49.0 -54.5 -48.9 8.1 24.5 78.1 94 159 A Y H X S+ 0 0 3 -4,-2.5 4,-1.4 1,-0.2 -1,-0.2 0.905 108.8 52.8 -57.2 -47.4 11.7 23.3 78.7 95 160 A R H >X S+ 0 0 75 -4,-2.6 4,-1.3 2,-0.2 3,-0.5 0.917 110.6 46.4 -59.9 -42.2 11.4 20.7 76.0 96 161 A E H >< S+ 0 0 75 -4,-2.5 3,-1.1 1,-0.2 -2,-0.2 0.985 109.7 55.9 -62.2 -50.8 10.3 23.3 73.4 97 162 A D H 3< S+ 0 0 113 -4,-2.6 -1,-0.2 1,-0.3 -2,-0.2 0.711 116.8 34.0 -51.6 -30.5 13.1 25.7 74.6 98 163 A E H << S- 0 0 60 -4,-1.4 2,-0.5 -3,-0.5 -1,-0.3 0.516 112.1-106.6-107.1 -6.0 15.9 23.1 73.9 99 164 A G << 0 0 49 -4,-1.3 -1,-0.2 -3,-1.1 0, 0.0 -0.969 360.0 360.0 122.0-109.0 14.6 21.1 70.9 100 165 A F 0 0 126 -2,-0.5 -5,-0.1 -3,-0.1 -1,-0.1 0.650 360.0 360.0 -18.5 360.0 13.4 17.6 71.8