==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 09-JUN-04 1TL6 . COMPND 2 MOLECULE: 10 KDA ANTI-SIGMA FACTOR; . SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE T4; . AUTHOR L.J.LAMBERT,Y.WEI,V.SCHIRF,B.DEMELER,M.H.WERNER . 88 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7246.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 66 75.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 11.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 48 54.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 0 0 0 0 2 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A N 0 0 200 0, 0.0 2,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -10.1 16.9 24.1 30.9 2 3 A K > - 0 0 94 1,-0.1 4,-1.2 62,-0.0 58,-0.1 -0.205 360.0-118.2 -87.2 179.1 17.6 26.2 27.8 3 4 A N H > S+ 0 0 38 56,-0.2 4,-3.1 2,-0.2 5,-0.2 0.660 115.8 64.6 -84.5 -18.0 20.3 26.5 25.2 4 5 A I H > S+ 0 0 8 2,-0.2 4,-3.6 3,-0.2 5,-0.3 0.955 100.9 49.2 -65.6 -52.1 20.9 29.9 26.6 5 6 A D H > S+ 0 0 56 2,-0.2 4,-1.2 1,-0.2 -2,-0.2 0.915 115.8 44.0 -43.4 -59.5 22.0 28.3 29.8 6 7 A T H X S+ 0 0 45 -4,-1.2 4,-1.4 1,-0.2 3,-0.3 0.961 118.1 42.7 -49.6 -62.3 24.3 26.0 27.9 7 8 A V H X S+ 0 0 14 -4,-3.1 4,-2.7 1,-0.2 5,-0.3 0.842 107.6 56.6 -63.1 -41.3 25.7 28.6 25.5 8 9 A R H X S+ 0 0 81 -4,-3.6 4,-3.0 1,-0.2 5,-0.3 0.880 107.2 52.2 -65.3 -31.3 26.3 31.4 28.0 9 10 A E H X S+ 0 0 94 -4,-1.2 4,-1.5 -3,-0.3 5,-0.3 0.883 110.7 47.9 -65.8 -40.1 28.4 29.0 30.0 10 11 A I H X S+ 0 0 26 -4,-1.4 4,-2.3 2,-0.2 -2,-0.2 0.989 118.7 38.9 -57.4 -61.1 30.4 28.3 26.8 11 12 A I H X S+ 0 0 57 -4,-2.7 4,-3.3 1,-0.2 -2,-0.2 0.894 117.0 47.6 -61.3 -47.2 30.9 31.9 25.9 12 13 A T H X S+ 0 0 65 -4,-3.0 4,-2.5 -5,-0.3 -1,-0.2 0.907 114.8 44.3 -67.9 -40.1 31.4 33.4 29.3 13 14 A V H X S+ 0 0 31 -4,-1.5 4,-1.8 -5,-0.3 -1,-0.2 0.901 116.5 48.8 -73.6 -36.0 34.0 30.8 30.4 14 15 A A H X S+ 0 0 10 -4,-2.3 4,-2.2 -5,-0.3 -2,-0.2 0.957 110.8 50.6 -56.3 -54.7 35.6 31.1 27.1 15 16 A S H X S+ 0 0 23 -4,-3.3 4,-2.7 1,-0.2 -2,-0.2 0.903 109.2 50.4 -51.9 -50.3 35.6 34.9 27.4 16 17 A I H X S+ 0 0 120 -4,-2.5 4,-0.6 1,-0.2 -1,-0.2 0.890 112.7 46.8 -58.5 -42.3 37.2 34.9 30.8 17 18 A L H <>S+ 0 0 29 -4,-1.8 5,-2.6 -5,-0.2 -1,-0.2 0.785 122.4 35.4 -77.8 -22.7 40.0 32.5 29.6 18 19 A I H ><5S+ 0 0 9 -4,-2.2 3,-1.2 3,-0.2 -2,-0.2 0.960 102.8 71.6 -85.7 -57.4 40.6 34.6 26.5 19 20 A K H 3<5S- 0 0 121 -4,-2.7 -3,-0.1 1,-0.3 -2,-0.1 0.713 123.3 -2.5 -29.6 -79.1 40.1 38.2 27.6 20 21 A F T 3<5S+ 0 0 195 -4,-0.6 -1,-0.3 -5,-0.1 -2,-0.1 0.245 138.5 40.7-103.3 18.3 43.0 39.0 29.9 21 22 A S T < 5S+ 0 0 80 -3,-1.2 2,-0.4 -5,-0.2 -3,-0.2 0.732 108.3 5.1-125.2 -76.9 44.6 35.6 29.7 22 23 A R < + 0 0 123 -5,-2.6 3,-0.4 1,-0.1 4,-0.2 -0.801 45.5 154.5-140.8 91.4 45.1 33.2 26.8 23 24 A E >> + 0 0 64 -2,-0.4 3,-1.8 1,-0.2 4,-1.0 0.808 65.0 78.1 -88.4 -31.5 44.1 34.0 23.3 24 25 A D H 3> S+ 0 0 109 1,-0.3 4,-0.6 2,-0.2 -1,-0.2 0.515 90.8 56.3 -56.9 -13.8 46.4 31.7 21.5 25 26 A I H 34 S+ 0 0 12 -3,-0.4 7,-1.7 2,-0.2 6,-0.3 0.650 97.5 59.1 -96.1 -22.0 44.2 28.7 22.2 26 27 A V H <4 S+ 0 0 28 -3,-1.8 3,-0.4 -4,-0.2 -2,-0.2 0.745 97.9 65.8 -76.4 -23.6 41.1 30.3 20.6 27 28 A E H < S+ 0 0 142 -4,-1.0 2,-0.8 1,-0.3 -2,-0.2 0.948 111.2 31.3 -49.8 -58.9 43.3 30.4 17.5 28 29 A N S >X S- 0 0 87 -4,-0.6 3,-2.3 1,-0.1 4,-0.8 -0.835 90.9-158.8-106.8 89.4 43.4 26.6 17.3 29 30 A R H 3> S+ 0 0 154 -2,-0.8 4,-1.5 -3,-0.4 -1,-0.1 0.475 80.7 65.7 -68.0 -5.3 39.9 26.2 18.8 30 31 A A H 3> S+ 0 0 47 2,-0.2 4,-1.9 1,-0.1 -1,-0.3 0.831 100.2 53.3 -77.2 -32.0 40.4 22.6 20.0 31 32 A N H <> S+ 0 0 81 -3,-2.3 4,-1.2 -6,-0.3 -2,-0.2 0.920 108.0 51.5 -66.3 -45.2 42.9 23.8 22.5 32 33 A F H >X S+ 0 0 32 -7,-1.7 4,-1.8 -4,-0.8 3,-0.6 0.919 106.9 53.8 -48.0 -51.8 40.4 26.3 23.7 33 34 A I H 3X S+ 0 0 27 -4,-1.5 4,-2.4 1,-0.3 3,-0.3 0.931 109.1 46.2 -56.9 -53.3 37.7 23.6 24.1 34 35 A A H 3X S+ 0 0 66 -4,-1.9 4,-1.1 1,-0.3 -1,-0.3 0.679 112.0 50.2 -73.9 -13.1 39.8 21.4 26.3 35 36 A F H S+ 0 0 1 -4,-1.8 5,-0.6 -3,-0.3 3,-0.4 0.832 109.5 49.7 -77.9 -33.0 37.4 25.3 28.9 37 38 A N H >X5S+ 0 0 22 -4,-2.4 3,-1.9 1,-0.2 4,-0.7 0.919 98.7 68.7 -72.4 -39.5 36.3 21.8 29.8 38 39 A E H 3<5S+ 0 0 154 -4,-1.1 -1,-0.2 1,-0.3 -2,-0.2 0.784 89.1 67.1 -33.6 -43.5 39.1 21.6 32.4 39 40 A I T 3<5S- 0 0 97 -4,-0.6 -1,-0.3 -3,-0.4 -2,-0.2 0.806 124.7 -93.8 -51.2 -37.5 37.2 24.3 34.4 40 41 A G T <45S+ 0 0 56 -3,-1.9 2,-0.7 -4,-0.4 -2,-0.2 0.513 70.4 156.2 111.4 23.5 34.3 22.0 35.2 41 42 A V << - 0 0 9 -4,-0.7 2,-0.3 -5,-0.6 7,-0.2 -0.741 21.2-175.7 -83.3 109.7 32.1 23.0 32.3 42 43 A T + 0 0 101 -2,-0.7 5,-0.1 1,-0.1 2,-0.1 -0.801 16.5 165.8-117.3 155.9 29.7 20.1 31.7 43 44 A H - 0 0 51 3,-1.4 2,-2.1 -2,-0.3 4,-0.1 0.007 64.7 -2.9-128.0-125.5 27.1 19.3 29.2 44 45 A E S S- 0 0 163 1,-0.2 3,-0.1 3,-0.1 -2,-0.0 -0.413 116.5 -65.1 -86.4 66.2 25.2 16.2 28.3 45 46 A G S S+ 0 0 82 -2,-2.1 -1,-0.2 1,-0.2 2,-0.2 0.298 123.3 63.7 77.5 -11.2 26.9 13.7 30.6 46 47 A R S S- 0 0 173 1,-0.1 -3,-1.4 3,-0.0 -1,-0.2 -0.690 91.4 -81.4-136.7 174.7 30.0 14.3 28.7 47 48 A K - 0 0 152 -2,-0.2 2,-0.2 -5,-0.1 -3,-0.1 -0.356 63.1 -77.9 -79.5 171.3 32.6 16.9 27.6 48 49 A L - 0 0 37 -7,-0.2 2,-0.4 -15,-0.2 -1,-0.1 -0.490 39.2-162.4 -81.2 132.3 32.0 19.3 24.8 49 50 A N > - 0 0 79 -2,-0.2 3,-1.2 1,-0.1 4,-0.1 -0.930 20.3-137.6-108.0 139.1 32.3 18.2 21.2 50 51 A Q G > S+ 0 0 129 -2,-0.4 3,-1.1 1,-0.3 -1,-0.1 0.721 98.1 72.1 -70.7 -18.7 32.6 20.9 18.5 51 52 A N G > S+ 0 0 124 1,-0.2 3,-1.1 2,-0.1 -1,-0.3 0.744 79.7 75.1 -63.7 -28.3 30.2 18.9 16.3 52 53 A S G <> + 0 0 40 -3,-1.2 4,-0.8 1,-0.3 3,-0.5 0.429 59.9 100.8 -78.8 7.4 27.3 19.9 18.5 53 54 A F H <> S+ 0 0 138 -3,-1.1 4,-2.2 1,-0.2 5,-0.3 0.819 79.6 59.2 -55.7 -28.8 27.1 23.5 17.2 54 55 A R H <> S+ 0 0 168 -3,-1.1 4,-1.4 1,-0.2 5,-0.3 0.929 104.9 48.6 -60.7 -43.7 24.2 22.2 15.1 55 56 A K H 4 S+ 0 0 117 -3,-0.5 -2,-0.2 -4,-0.2 -1,-0.2 0.573 112.9 53.0 -69.1 -13.8 22.5 21.3 18.4 56 57 A I H < S+ 0 0 17 -4,-0.8 3,-0.3 -3,-0.3 4,-0.3 0.941 114.2 29.5 -82.3 -69.5 23.4 24.8 19.6 57 58 A V H >< S+ 0 0 76 -4,-2.2 3,-0.8 1,-0.2 -2,-0.1 0.769 113.9 56.4 -77.5 -27.7 22.1 27.2 17.1 58 59 A S T 3< S+ 0 0 70 -4,-1.4 -1,-0.2 -5,-0.3 -3,-0.1 0.884 104.7 54.0 -72.7 -37.5 19.1 25.5 15.6 59 60 A E T 3 S+ 0 0 104 -5,-0.3 -1,-0.2 -3,-0.3 2,-0.2 0.418 89.3 93.2 -77.6 -4.2 17.4 25.0 19.0 60 61 A L < - 0 0 38 -3,-0.8 2,-0.2 -4,-0.3 3,-0.0 -0.589 63.4-151.9 -87.0 157.6 17.5 28.6 19.9 61 62 A T > - 0 0 71 -2,-0.2 4,-1.3 1,-0.1 5,-0.1 -0.536 32.3-101.4-114.6-177.1 14.5 30.8 19.1 62 63 A Q H > S+ 0 0 140 2,-0.2 4,-2.1 -2,-0.2 5,-0.2 0.887 123.7 59.2 -71.4 -36.0 14.3 34.6 18.4 63 64 A E H > S+ 0 0 144 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.894 108.3 43.9 -50.6 -47.7 13.0 34.9 22.0 64 65 A D H > S+ 0 0 12 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.792 107.3 59.0 -72.3 -38.3 16.3 33.4 23.2 65 66 A K H X S+ 0 0 114 -4,-1.3 4,-1.5 2,-0.2 -2,-0.2 0.953 109.5 43.8 -52.9 -50.7 18.4 35.5 20.8 66 67 A K H X S+ 0 0 124 -4,-2.1 4,-3.5 1,-0.2 3,-0.3 0.949 114.6 50.1 -62.9 -56.0 17.1 38.7 22.3 67 68 A T H X S+ 0 0 34 -4,-1.9 4,-3.1 2,-0.2 5,-0.4 0.802 104.1 57.0 -39.0 -53.2 17.4 37.4 25.8 68 69 A L H X S+ 0 0 39 -4,-2.3 4,-1.3 1,-0.2 -1,-0.2 0.916 117.0 36.1 -57.1 -45.5 21.0 36.2 25.5 69 70 A I H < S+ 0 0 60 -4,-1.5 7,-0.3 -3,-0.3 -2,-0.2 0.948 118.0 50.8 -67.9 -58.6 22.0 39.7 24.5 70 71 A D H >< S+ 0 0 104 -4,-3.5 3,-0.5 1,-0.2 -2,-0.2 0.858 113.7 42.1 -56.7 -43.8 19.6 41.6 26.8 71 72 A E H 3< S+ 0 0 122 -4,-3.1 2,-0.2 1,-0.2 -1,-0.2 0.931 130.4 23.9 -71.6 -45.7 20.5 39.8 30.0 72 73 A F T 3X S+ 0 0 108 -4,-1.3 4,-1.7 -5,-0.4 3,-0.3 -0.482 70.0 147.4-121.9 63.4 24.2 39.7 29.5 73 74 A N H <> S+ 0 0 78 -3,-0.5 4,-2.9 1,-0.2 5,-0.3 0.827 72.9 61.9 -69.3 -29.2 24.9 42.6 27.2 74 75 A E H > S+ 0 0 178 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.907 108.0 43.1 -55.0 -45.3 28.2 43.1 28.9 75 76 A G H > S+ 0 0 32 -3,-0.3 4,-2.1 2,-0.2 -2,-0.2 0.802 112.6 52.8 -75.3 -31.3 29.2 39.7 27.7 76 77 A F H X S+ 0 0 61 -4,-1.7 4,-2.9 -7,-0.3 5,-0.2 0.975 113.9 41.1 -66.2 -55.9 27.8 40.1 24.3 77 78 A E H X S+ 0 0 104 -4,-2.9 4,-2.5 1,-0.2 5,-0.2 0.895 112.5 59.1 -57.9 -41.9 29.7 43.4 23.7 78 79 A G H X S+ 0 0 24 -4,-2.1 4,-1.5 -5,-0.3 -1,-0.2 0.932 114.6 32.6 -47.4 -57.7 32.7 41.8 25.3 79 80 A V H X S+ 0 0 42 -4,-2.1 4,-3.1 2,-0.2 -2,-0.2 0.839 114.8 59.4 -76.6 -30.4 32.9 38.9 22.8 80 81 A Y H X S+ 0 0 93 -4,-2.9 4,-1.7 2,-0.2 -2,-0.2 0.877 107.2 48.0 -62.2 -38.1 31.6 41.0 19.9 81 82 A R H X S+ 0 0 176 -4,-2.5 4,-1.5 -5,-0.2 5,-0.2 0.912 112.7 48.0 -67.0 -41.8 34.5 43.3 20.4 82 83 A Y H X>S+ 0 0 22 -4,-1.5 4,-3.2 -5,-0.2 5,-0.6 0.934 108.5 57.6 -59.8 -47.2 36.9 40.4 20.6 83 84 A L H <5S+ 0 0 71 -4,-3.1 -2,-0.2 1,-0.2 -1,-0.2 0.894 110.7 38.1 -52.8 -52.9 35.3 38.9 17.4 84 85 A E H <5S+ 0 0 142 -4,-1.7 -1,-0.2 1,-0.2 -2,-0.2 0.834 123.9 41.4 -71.3 -30.9 35.9 41.8 15.1 85 86 A M H <5S+ 0 0 128 -4,-1.5 -2,-0.2 -5,-0.2 -3,-0.2 0.860 125.3 25.0 -89.0 -42.7 39.3 42.6 16.5 86 87 A Y T <5S- 0 0 105 -4,-3.2 2,-0.3 1,-0.2 -3,-0.2 0.934 119.3 -42.1 -87.1 -74.1 40.9 39.2 17.0 87 88 A T < 0 0 84 -5,-0.6 -1,-0.2 -4,-0.0 -2,-0.1 -0.977 360.0 360.0-168.2 139.4 39.5 36.6 14.8 88 89 A N 0 0 163 -2,-0.3 -4,-0.1 -4,-0.1 -5,-0.0 -0.767 360.0 360.0 -92.3 360.0 36.2 35.4 13.4