==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER UNKNOWN FUNCTION 25-JUN-04 1TUV . COMPND 2 MOLECULE: PROTEIN YGIN; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR M.A.ADAMS,Z.JIA . 103 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6786.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 76 73.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 27 26.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 9.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 9.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 29 28.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 184 0, 0.0 2,-0.4 0, 0.0 66,-0.2 0.000 360.0 360.0 360.0 -61.9 7.9 1.7 -20.6 2 2 A L E -A 66 0A 30 64,-2.7 64,-2.0 99,-0.1 2,-0.5 -0.773 360.0-156.3 -85.7 140.2 4.3 2.0 -22.2 3 3 A T E -AB 65 100A 40 97,-2.2 97,-3.5 -2,-0.4 2,-0.5 -0.942 6.3-160.6-110.6 132.8 3.0 5.5 -22.6 4 4 A V E -AB 64 99A 2 60,-2.4 60,-2.5 -2,-0.5 2,-0.5 -0.971 10.8-176.0-110.9 129.2 -0.7 5.9 -22.8 5 5 A I E -AB 63 98A 62 93,-2.2 93,-3.2 -2,-0.5 2,-0.4 -0.996 12.8-179.3-119.3 119.7 -2.4 9.0 -24.3 6 6 A A E -AB 62 97A 6 56,-1.9 56,-3.4 -2,-0.5 2,-0.6 -0.986 15.5-154.1-121.1 124.2 -6.2 8.8 -23.8 7 7 A E E -AB 61 96A 70 89,-3.0 89,-2.4 -2,-0.4 2,-0.6 -0.919 7.8-161.2 -98.5 121.9 -8.6 11.5 -25.1 8 8 A I E -AB 60 95A 3 52,-3.2 52,-2.1 -2,-0.6 2,-0.6 -0.924 6.3-153.2-101.9 114.8 -11.8 11.6 -23.2 9 9 A R E -AB 59 94A 110 85,-2.9 84,-3.2 -2,-0.6 85,-1.4 -0.818 15.0-160.6 -92.0 124.3 -14.5 13.4 -25.1 10 10 A T E - B 0 92A 1 48,-1.9 82,-0.2 -2,-0.6 7,-0.1 -0.644 27.4 -90.8-101.9 159.1 -17.1 15.0 -22.8 11 11 A R - 0 0 109 80,-2.6 6,-0.3 -2,-0.2 5,-0.2 -0.439 54.3-100.8 -63.6 134.1 -20.7 16.2 -23.4 12 12 A P S S- 0 0 86 0, 0.0 -1,-0.1 0, 0.0 46,-0.0 -0.268 76.9 -16.5 -54.9 143.3 -20.8 19.9 -24.5 13 13 A G S > S+ 0 0 49 1,-0.1 3,-2.1 -3,-0.1 4,-0.3 0.048 88.3 91.8 65.7-161.9 -21.8 22.6 -21.8 14 14 A Q T 3 S- 0 0 154 1,-0.3 -1,-0.1 2,-0.1 -3,-0.1 0.736 113.1 -78.1 50.2 38.2 -23.5 22.1 -18.4 15 15 A H T 3> S+ 0 0 153 1,-0.1 4,-2.2 3,-0.1 -1,-0.3 0.734 90.1 141.2 32.8 35.9 -20.1 21.7 -16.5 16 16 A H H <> + 0 0 36 -3,-2.1 4,-1.8 -5,-0.2 5,-0.1 0.902 69.7 48.3 -64.1 -42.9 -19.7 18.1 -17.8 17 17 A R H > S+ 0 0 64 -4,-0.3 4,-2.3 -6,-0.3 5,-0.2 0.934 111.7 49.6 -67.2 -39.7 -15.9 18.5 -18.4 18 18 A Q H > S+ 0 0 93 1,-0.2 4,-2.8 2,-0.2 -2,-0.2 0.904 106.5 56.6 -64.8 -37.5 -15.4 20.0 -15.0 19 19 A A H X S+ 0 0 26 -4,-2.2 4,-1.8 1,-0.2 -1,-0.2 0.913 109.6 45.9 -57.9 -41.2 -17.4 17.1 -13.4 20 20 A V H X S+ 0 0 0 -4,-1.8 4,-2.2 2,-0.2 -1,-0.2 0.917 111.0 50.8 -68.3 -46.2 -15.0 14.7 -15.0 21 21 A L H X S+ 0 0 34 -4,-2.3 4,-2.4 2,-0.2 -2,-0.2 0.894 108.1 54.0 -56.2 -42.1 -11.9 16.7 -13.9 22 22 A D H X S+ 0 0 84 -4,-2.8 4,-1.5 1,-0.2 -2,-0.2 0.899 106.9 51.4 -62.8 -37.6 -13.3 16.7 -10.4 23 23 A Q H X S+ 0 0 43 -4,-1.8 4,-0.9 -5,-0.2 -2,-0.2 0.891 109.4 49.9 -64.3 -39.0 -13.6 12.9 -10.5 24 24 A F H >X S+ 0 0 3 -4,-2.2 4,-2.8 1,-0.2 3,-0.8 0.909 103.3 59.9 -64.0 -37.7 -10.0 12.8 -11.6 25 25 A A H 3< S+ 0 0 71 -4,-2.4 -2,-0.2 1,-0.3 -1,-0.2 0.897 105.0 51.5 -57.2 -38.0 -8.9 15.1 -8.7 26 26 A K H 3< S+ 0 0 145 -4,-1.5 -1,-0.3 1,-0.2 4,-0.2 0.789 120.9 31.0 -64.8 -29.8 -10.4 12.4 -6.4 27 27 A I H S+ 0 0 68 0, 0.0 4,-1.1 0, 0.0 -1,-0.2 0.913 113.6 48.8 -56.6 -38.3 -3.0 10.5 -6.1 30 30 A T H > S+ 0 0 65 -3,-0.3 4,-0.7 -4,-0.2 3,-0.4 0.904 110.1 49.8 -66.2 -45.4 -4.3 6.9 -5.8 31 31 A V H >< S+ 0 0 0 -4,-2.6 3,-1.4 1,-0.2 -1,-0.2 0.916 104.5 57.2 -63.0 -40.9 -3.5 6.1 -9.3 32 32 A L H 3< S+ 0 0 85 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.825 106.3 53.0 -57.7 -28.8 0.0 7.4 -9.0 33 33 A K H 3< S+ 0 0 173 -4,-1.1 -1,-0.3 -3,-0.4 -2,-0.2 0.590 85.2 111.8 -83.7 -10.7 0.5 4.9 -6.2 34 34 A E S X< S- 0 0 26 -3,-1.4 3,-2.1 -4,-0.7 2,-0.1 -0.270 84.0 -88.8 -61.7 145.4 -0.7 2.0 -8.2 35 35 A E T 3 S+ 0 0 160 1,-0.3 -1,-0.1 36,-0.0 40,-0.1 -0.330 111.0 10.2 -53.3 130.2 1.9 -0.7 -9.1 36 36 A G T 3 S+ 0 0 7 1,-0.3 31,-2.3 -3,-0.1 2,-0.5 0.445 90.3 135.0 82.4 2.3 3.7 0.1 -12.2 37 37 A C E < +C 66 0A 11 -3,-2.1 -1,-0.3 29,-0.2 29,-0.2 -0.736 19.7 166.7 -87.2 122.7 2.3 3.6 -12.6 38 38 A H E + 0 0 103 27,-3.0 2,-0.2 -2,-0.5 28,-0.2 0.195 68.7 3.6-119.8 21.7 5.0 6.1 -13.6 39 39 A G E +C 65 0A 19 26,-0.8 26,-2.1 -8,-0.1 -1,-0.4 -0.690 50.1 173.1 162.2 139.7 2.7 9.0 -14.6 40 40 A Y E +C 64 0A 16 24,-0.2 24,-0.2 -2,-0.2 -8,-0.1 -0.648 18.8 160.4-161.9 96.9 -1.0 9.9 -14.7 41 41 A A E -C 63 0A 38 22,-2.4 22,-2.2 -2,-0.2 2,-0.4 -0.971 29.5-148.3-133.8 116.8 -1.9 13.4 -15.6 42 42 A P E -C 62 0A 40 0, 0.0 2,-0.3 0, 0.0 20,-0.2 -0.711 29.3-174.2 -80.0 127.1 -5.3 14.8 -16.9 43 43 A M E -C 61 0A 88 18,-2.3 18,-2.8 -2,-0.4 2,-0.3 -0.905 13.8-162.9-122.8 154.3 -4.6 17.7 -19.2 44 44 A V - 0 0 61 -2,-0.3 16,-0.1 16,-0.2 11,-0.0 -0.934 35.3 -87.0-132.2 160.4 -6.7 20.3 -21.0 45 45 A D - 0 0 49 14,-0.4 2,-0.5 11,-0.3 10,-0.1 -0.292 34.0-156.2 -62.6 146.7 -6.1 22.6 -23.9 46 46 A C - 0 0 105 0, 0.0 2,-0.4 0, 0.0 -1,-0.0 -0.977 19.2-126.6-128.8 117.8 -4.6 26.0 -23.0 47 47 A A + 0 0 74 -2,-0.5 8,-0.0 1,-0.2 -2,-0.0 -0.461 32.6 171.2 -71.8 113.8 -5.3 28.7 -25.6 48 48 A A - 0 0 69 -2,-0.4 -1,-0.2 2,-0.2 3,-0.1 0.384 45.4-123.0-103.2 2.8 -1.9 30.2 -26.5 49 49 A G + 0 0 83 1,-0.2 2,-0.4 2,-0.1 -2,-0.1 0.860 64.9 138.5 53.3 37.0 -3.3 32.4 -29.4 50 50 A V > - 0 0 59 1,-0.1 3,-1.3 0, 0.0 -1,-0.2 -0.920 59.2-130.9-110.2 145.9 -0.9 30.8 -31.9 51 51 A S T 3 S+ 0 0 128 -2,-0.4 -1,-0.1 1,-0.3 -2,-0.1 0.757 102.1 57.8 -68.6 -22.5 -2.1 29.8 -35.3 52 52 A F T 3 S+ 0 0 172 2,-0.0 -1,-0.3 -3,-0.0 2,-0.2 0.627 84.7 100.4 -88.4 -6.7 -0.7 26.3 -35.2 53 53 A Q < - 0 0 55 -3,-1.3 2,-0.4 2,-0.0 -6,-0.0 -0.499 54.3-159.2 -81.9 138.6 -2.6 25.2 -32.1 54 54 A S - 0 0 110 -2,-0.2 2,-0.4 2,-0.0 -2,-0.0 -0.958 11.6-164.3-110.8 137.0 -5.8 23.0 -32.3 55 55 A M - 0 0 86 -2,-0.4 -11,-0.0 -10,-0.1 -8,-0.0 -0.952 20.2-173.3-124.8 143.1 -8.2 23.0 -29.3 56 56 A A > - 0 0 39 -2,-0.4 3,-0.7 3,-0.1 -11,-0.3 -0.868 7.1-170.7-128.2 96.2 -11.0 20.7 -28.3 57 57 A P T 3 S+ 0 0 79 0, 0.0 2,-0.6 0, 0.0 -1,-0.1 0.779 82.2 61.6 -60.3 -24.6 -12.8 22.3 -25.2 58 58 A D T 3 S+ 0 0 60 -48,-0.0 -48,-1.9 -49,-0.0 2,-0.3 -0.340 95.8 81.9 -98.4 43.6 -14.9 19.2 -24.7 59 59 A S E < -A 9 0A 4 -3,-0.7 2,-0.4 -2,-0.6 -14,-0.4 -0.995 54.9-159.2-148.6 151.9 -12.0 17.0 -24.1 60 60 A I E -A 8 0A 0 -52,-2.1 -52,-3.2 -2,-0.3 2,-0.6 -0.977 17.6-150.6-122.7 132.5 -9.5 15.9 -21.4 61 61 A V E -AC 7 43A 40 -18,-2.8 -18,-2.3 -2,-0.4 2,-0.5 -0.951 7.4-153.8-108.8 117.2 -6.2 14.3 -22.5 62 62 A M E -AC 6 42A 2 -56,-3.4 -56,-1.9 -2,-0.6 2,-0.5 -0.837 5.7-166.8 -87.1 133.6 -4.6 11.8 -20.2 63 63 A I E +AC 5 41A 80 -22,-2.2 -22,-2.4 -2,-0.5 2,-0.3 -0.986 23.5 161.8-117.8 122.4 -0.9 11.3 -20.3 64 64 A E E -AC 4 40A 13 -60,-2.5 -60,-2.4 -2,-0.5 2,-0.4 -0.936 30.0-151.9-139.2 155.9 0.2 8.2 -18.5 65 65 A Q E -AC 3 39A 86 -26,-2.1 -27,-3.0 -2,-0.3 -26,-0.8 -0.999 15.8-178.8-134.1 131.0 3.1 5.7 -18.1 66 66 A W E -AC 2 37A 0 -64,-2.0 -64,-2.7 -2,-0.4 -29,-0.2 -0.982 31.5-132.4-126.5 143.3 2.7 2.1 -17.1 67 67 A E S S- 0 0 95 -31,-2.3 2,-0.3 -2,-0.3 -30,-0.1 0.847 84.5 -13.0 -66.5 -30.9 5.4 -0.5 -16.7 68 68 A S > - 0 0 35 -32,-0.1 4,-1.8 1,-0.1 3,-0.2 -0.974 69.6 -97.7-158.2 168.2 3.5 -3.1 -18.7 69 69 A I H > S+ 0 0 82 -2,-0.3 4,-2.8 1,-0.2 5,-0.2 0.879 120.8 58.2 -59.4 -41.8 0.3 -4.0 -20.3 70 70 A A H > S+ 0 0 59 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.889 105.5 50.1 -53.3 -40.2 -0.6 -6.2 -17.2 71 71 A H H > S+ 0 0 45 -3,-0.2 4,-2.1 2,-0.2 -2,-0.2 0.902 111.9 47.0 -68.2 -41.7 -0.2 -3.1 -15.0 72 72 A L H X S+ 0 0 16 -4,-1.8 4,-1.6 2,-0.2 -2,-0.2 0.918 111.6 50.5 -61.4 -47.9 -2.5 -1.0 -17.2 73 73 A E H X S+ 0 0 116 -4,-2.8 4,-0.8 2,-0.2 -2,-0.2 0.914 110.2 50.4 -59.1 -40.8 -5.1 -3.8 -17.3 74 74 A A H >< S+ 0 0 58 -4,-2.3 3,-1.1 -5,-0.2 4,-0.5 0.918 105.2 58.3 -61.4 -43.3 -5.0 -4.1 -13.5 75 75 A H H >< S+ 0 0 5 -4,-2.1 3,-1.3 1,-0.2 6,-0.3 0.900 100.6 56.0 -48.4 -43.8 -5.4 -0.4 -13.3 76 76 A L H 3< S+ 0 0 91 -4,-1.6 -1,-0.2 1,-0.3 -2,-0.2 0.733 106.7 49.9 -71.1 -20.6 -8.7 -0.6 -15.2 77 77 A Q T << S+ 0 0 126 -3,-1.1 -1,-0.3 -4,-0.8 -2,-0.2 0.400 83.5 115.3 -96.7 0.7 -10.2 -3.1 -12.7 78 78 A T S <> S- 0 0 26 -3,-1.3 4,-2.3 -4,-0.5 3,-0.4 -0.327 75.2-119.1 -70.5 153.4 -9.4 -1.2 -9.5 79 79 A P H > S+ 0 0 103 0, 0.0 4,-2.8 0, 0.0 5,-0.2 0.845 113.1 58.8 -64.3 -32.8 -12.3 0.1 -7.4 80 80 A H H > S+ 0 0 28 2,-0.2 4,-1.9 1,-0.2 5,-0.1 0.883 109.9 44.7 -64.3 -33.5 -11.3 3.7 -7.9 81 81 A M H > S+ 0 0 9 -3,-0.4 4,-2.7 -6,-0.3 5,-0.2 0.915 112.8 49.2 -79.2 -37.9 -11.6 3.2 -11.7 82 82 A K H X S+ 0 0 113 -4,-2.3 4,-2.1 2,-0.2 -2,-0.2 0.935 114.2 47.3 -59.4 -41.3 -14.9 1.4 -11.5 83 83 A A H X S+ 0 0 59 -4,-2.8 4,-2.0 1,-0.2 -2,-0.2 0.881 111.5 51.2 -66.5 -39.0 -16.2 4.2 -9.2 84 84 A Y H X S+ 0 0 19 -4,-1.9 4,-1.9 -5,-0.2 -2,-0.2 0.952 109.0 50.5 -58.8 -50.9 -14.8 6.8 -11.6 85 85 A S H X S+ 0 0 69 -4,-2.7 4,-0.6 1,-0.2 -2,-0.2 0.903 112.0 46.8 -61.3 -42.2 -16.6 5.2 -14.5 86 86 A E H >< S+ 0 0 118 -4,-2.1 3,-0.8 1,-0.2 -1,-0.2 0.923 111.2 52.7 -62.4 -42.1 -19.9 5.1 -12.7 87 87 A A H 3< S+ 0 0 45 -4,-2.0 3,-0.3 1,-0.2 -2,-0.2 0.810 116.0 38.1 -66.2 -29.5 -19.5 8.7 -11.6 88 88 A V H >X S+ 0 0 6 -4,-1.9 3,-2.3 1,-0.2 4,-1.7 0.367 78.7 111.1-107.1 6.7 -18.9 10.1 -15.1 89 89 A K T << S+ 0 0 140 -3,-0.8 -1,-0.2 -4,-0.6 -2,-0.1 0.734 83.5 44.0 -57.8 -25.6 -21.3 7.9 -17.2 90 90 A G T 34 S+ 0 0 42 -3,-0.3 -1,-0.3 -4,-0.2 -2,-0.1 0.387 115.9 49.5 -95.5 0.0 -23.6 10.9 -17.9 91 91 A D T <4 S+ 0 0 25 -3,-2.3 -80,-2.6 -75,-0.1 2,-0.4 0.657 96.0 73.3-110.4 -24.8 -20.6 13.2 -18.7 92 92 A V E < -B 10 0A 30 -4,-1.7 -82,-0.3 -82,-0.2 3,-0.1 -0.803 44.3-179.7-104.9 140.0 -18.4 11.3 -21.1 93 93 A L E - 0 0 67 -84,-3.2 2,-0.3 1,-0.4 -83,-0.2 0.745 65.5 -29.6 -99.4 -40.5 -19.2 10.5 -24.8 94 94 A E E -B 9 0A 96 -85,-1.4 -85,-2.9 2,-0.0 -1,-0.4 -0.984 47.9-132.8-168.2 167.5 -16.2 8.5 -25.9 95 95 A M E -B 8 0A 112 -2,-0.3 2,-0.5 -87,-0.2 -87,-0.2 -0.987 4.2-160.2-131.8 145.4 -12.5 7.8 -25.4 96 96 A N E -B 7 0A 92 -89,-2.4 -89,-3.0 -2,-0.3 2,-0.5 -0.978 21.1-169.1-124.7 115.8 -9.6 7.4 -27.9 97 97 A I E -B 6 0A 92 -2,-0.5 2,-0.4 -91,-0.2 -91,-0.2 -0.928 8.3-172.0-119.4 118.7 -6.7 5.5 -26.3 98 98 A R E -B 5 0A 150 -93,-3.2 -93,-2.2 -2,-0.5 2,-0.5 -0.910 10.7-156.6-108.4 141.1 -3.3 5.1 -27.8 99 99 A I E -B 4 0A 90 -2,-0.4 2,-0.3 -95,-0.2 -95,-0.2 -0.979 26.9-172.4-114.4 119.7 -0.5 2.9 -26.4 100 100 A L E -B 3 0A 59 -97,-3.5 -97,-2.2 -2,-0.5 3,-0.0 -0.829 21.3-169.8-123.2 150.9 2.8 4.2 -27.5 101 101 A Q - 0 0 168 -2,-0.3 -99,-0.1 -99,-0.2 -2,-0.0 -0.904 48.6 -75.5-126.4 161.0 6.5 3.2 -27.5 102 102 A P 0 0 116 0, 0.0 -1,-0.0 0, 0.0 -100,-0.0 -0.249 360.0 360.0 -54.3 136.2 9.6 5.3 -28.4 103 103 A G 0 0 131 -3,-0.0 0, 0.0 0, 0.0 0, 0.0 0.672 360.0 360.0 -86.5 360.0 9.9 5.7 -32.2