==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSFERASE 23-APR-03 1UCV . COMPND 2 MOLECULE: EPHRIN TYPE-A RECEPTOR 8; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.GORONCY,T.KIGAWA,S.KOSHIBA,N.KOBAYASHI,N.TOCHIO,M.INOUE, . 81 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5335.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 56 69.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 18 22.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 31 38.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 97 0, 0.0 4,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 107.7 -3.0 11.1 -8.5 2 2 A S + 0 0 129 2,-0.2 3,-0.1 69,-0.0 68,-0.0 0.893 360.0 36.2 -89.8 -49.6 -6.6 10.3 -7.7 3 3 A S S S- 0 0 129 1,-0.2 2,-0.2 36,-0.0 0, 0.0 0.978 133.2 -48.8 -68.2 -58.2 -6.6 6.5 -8.3 4 4 A G - 0 0 30 2,-0.0 2,-0.4 66,-0.0 -1,-0.2 -0.597 46.4-143.5 175.2 119.4 -3.1 5.8 -7.0 5 5 A S - 0 0 87 -4,-0.3 2,-0.3 -2,-0.2 65,-0.0 -0.742 17.7-150.3 -93.7 136.8 0.4 7.2 -7.5 6 6 A S + 0 0 80 -2,-0.4 3,-0.1 1,-0.1 -2,-0.0 -0.815 36.0 138.4-107.3 146.1 3.4 4.9 -7.6 7 7 A G + 0 0 80 1,-0.4 2,-0.2 -2,-0.3 -1,-0.1 0.434 62.4 38.4-149.0 -44.8 6.9 5.8 -6.5 8 8 A L S S- 0 0 68 1,-0.0 26,-0.8 3,-0.0 -1,-0.4 -0.498 80.4-100.0-109.6-179.5 8.6 3.0 -4.6 9 9 A T B >> -A 33 0A 50 -2,-0.2 4,-1.4 24,-0.2 3,-0.6 -0.778 35.1-105.7-105.3 148.9 8.6 -0.8 -4.8 10 10 A V H 3> S+ 0 0 0 22,-0.6 4,-1.4 -2,-0.3 5,-0.1 0.740 123.8 55.0 -40.0 -25.2 6.6 -3.2 -2.6 11 11 A G H 3> S+ 0 0 11 21,-0.2 4,-3.2 2,-0.2 -1,-0.3 0.952 101.3 52.2 -76.7 -52.5 9.9 -3.8 -1.0 12 12 A D H <> S+ 0 0 104 -3,-0.6 4,-1.2 2,-0.2 -2,-0.2 0.941 116.9 39.5 -47.9 -58.1 10.8 -0.3 -0.0 13 13 A W H >X S+ 0 0 4 -4,-1.4 3,-1.8 1,-0.2 4,-0.8 0.982 115.9 49.1 -57.0 -63.4 7.5 0.3 1.7 14 14 A L H ><>S+ 0 0 0 -4,-1.4 5,-3.0 1,-0.3 3,-1.0 0.857 104.5 62.7 -44.8 -41.3 7.2 -3.2 3.3 15 15 A D H ><5S+ 0 0 115 -4,-3.2 3,-2.2 4,-0.3 -1,-0.3 0.874 92.0 64.6 -53.6 -40.0 10.8 -2.6 4.5 16 16 A S H <<5S+ 0 0 95 -3,-1.8 -1,-0.3 -4,-1.2 -2,-0.2 0.878 111.7 34.8 -51.9 -41.2 9.6 0.3 6.6 17 17 A I T <<5S- 0 0 39 -3,-1.0 -1,-0.3 -4,-0.8 -2,-0.2 0.226 119.3-110.6 -98.1 12.7 7.5 -2.1 8.7 18 18 A R T < 5S+ 0 0 193 -3,-2.2 -3,-0.3 -5,-0.2 -2,-0.1 0.875 92.1 111.7 60.7 38.4 10.1 -4.8 8.4 19 19 A M > < + 0 0 11 -5,-3.0 3,-3.1 -8,-0.2 4,-0.4 0.367 31.6 107.6-118.7 -1.7 7.8 -6.8 6.2 20 20 A G G > + 0 0 16 -6,-0.5 3,-1.4 1,-0.3 4,-0.5 0.717 63.5 80.4 -50.3 -20.5 9.7 -6.5 2.9 21 21 A R G 3 S+ 0 0 160 1,-0.3 -1,-0.3 -7,-0.2 3,-0.2 0.769 93.3 47.6 -58.7 -25.5 10.6 -10.2 3.5 22 22 A Y G X> S+ 0 0 29 -3,-3.1 3,-2.2 1,-0.2 4,-1.1 0.569 82.1 102.3 -91.0 -11.6 7.1 -11.0 2.1 23 23 A R H X> S+ 0 0 75 -3,-1.4 4,-1.7 -4,-0.4 3,-0.5 0.880 74.1 59.2 -34.7 -63.2 7.7 -8.6 -0.9 24 24 A D H 3> S+ 0 0 93 -4,-0.5 4,-1.1 1,-0.3 -1,-0.3 0.827 102.4 57.1 -37.2 -41.7 8.4 -11.6 -3.2 25 25 A H H X> S+ 0 0 52 -3,-2.2 4,-2.0 1,-0.2 3,-1.7 0.968 101.8 52.1 -57.0 -57.9 4.9 -12.8 -2.3 26 26 A F H <<>S+ 0 0 0 -4,-1.1 5,-3.0 -3,-0.5 4,-0.4 0.901 104.8 56.9 -45.3 -49.8 3.2 -9.6 -3.5 27 27 A A H ><5S+ 0 0 44 -4,-1.7 3,-0.5 1,-0.3 -1,-0.3 0.814 108.8 48.0 -53.3 -31.8 5.0 -9.9 -6.8 28 28 A A H <<5S+ 0 0 88 -3,-1.7 -1,-0.3 -4,-1.1 -2,-0.2 0.851 104.8 57.2 -78.3 -36.7 3.4 -13.3 -7.1 29 29 A G T 3<5S- 0 0 41 -4,-2.0 -1,-0.2 2,-0.2 -2,-0.2 0.403 131.3 -91.8 -75.5 5.1 -0.1 -12.1 -6.2 30 30 A G T < 5S+ 0 0 55 -3,-0.5 2,-0.5 -4,-0.4 -3,-0.2 0.676 93.1 121.6 92.8 20.1 0.1 -9.7 -9.1 31 31 A Y < + 0 0 21 -5,-3.0 -2,-0.2 -6,-0.2 -1,-0.2 -0.924 13.1 145.8-122.0 107.2 1.5 -6.8 -7.1 32 32 A S + 0 0 69 -2,-0.5 -22,-0.6 -5,-0.1 2,-0.2 0.494 69.4 37.5-113.0 -11.5 4.9 -5.4 -8.2 33 33 A S B > S-A 9 0A 46 -24,-0.2 4,-1.0 -23,-0.1 3,-0.3 -0.794 79.5-114.9-133.3 175.4 4.2 -1.8 -7.2 34 34 A L H > S+ 0 0 7 -26,-0.8 4,-3.0 -2,-0.2 5,-0.3 0.845 101.8 78.5 -80.9 -36.7 2.5 0.3 -4.5 35 35 A G H 4 S+ 0 0 22 1,-0.3 -1,-0.2 2,-0.2 4,-0.2 0.804 108.2 32.1 -40.8 -35.7 -0.2 1.7 -6.8 36 36 A M H >4 S+ 0 0 58 -3,-0.3 3,-1.1 2,-0.2 -1,-0.3 0.793 112.1 62.2 -92.8 -34.6 -1.9 -1.6 -6.5 37 37 A V H >< S+ 0 0 0 -4,-1.0 3,-1.6 1,-0.3 -2,-0.2 0.849 98.3 58.6 -59.5 -35.2 -0.8 -2.4 -2.9 38 38 A L T 3< S+ 0 0 20 -4,-3.0 -1,-0.3 1,-0.3 -2,-0.2 0.758 106.8 48.3 -66.2 -24.3 -2.7 0.7 -1.8 39 39 A R T < S+ 0 0 191 -3,-1.1 -1,-0.3 -5,-0.3 -2,-0.2 0.106 96.3 103.7-102.0 19.9 -5.9 -0.8 -3.2 40 40 A M < - 0 0 14 -3,-1.6 2,-0.3 20,-0.1 -3,-0.1 -0.411 46.7-175.6 -95.6 174.3 -5.2 -4.2 -1.6 41 41 A N >> - 0 0 73 -2,-0.1 4,-2.8 1,-0.1 3,-1.9 -0.972 48.7 -74.3-161.1 169.5 -6.9 -5.8 1.5 42 42 A A H 3> S+ 0 0 45 1,-0.3 4,-3.1 -2,-0.3 5,-0.3 0.840 128.8 58.2 -36.8 -45.6 -6.8 -8.8 3.8 43 43 A Q H 3> S+ 0 0 139 1,-0.2 4,-0.9 2,-0.2 -1,-0.3 0.896 115.8 34.1 -54.9 -43.2 -8.4 -10.7 1.0 44 44 A D H <> S+ 0 0 44 -3,-1.9 4,-1.3 2,-0.2 -2,-0.2 0.939 119.2 49.7 -77.9 -51.2 -5.4 -9.9 -1.3 45 45 A V H >X>S+ 0 0 0 -4,-2.8 3,-1.3 1,-0.2 4,-0.7 0.944 107.0 55.1 -52.6 -54.4 -2.7 -9.9 1.4 46 46 A R H ><5S+ 0 0 132 -4,-3.1 3,-1.7 1,-0.3 -1,-0.2 0.878 103.0 57.5 -47.2 -43.8 -3.8 -13.3 2.8 47 47 A A H 3<5S+ 0 0 74 -4,-0.9 -1,-0.3 -5,-0.3 -2,-0.2 0.857 95.9 63.5 -57.0 -36.7 -3.4 -14.7 -0.7 48 48 A L H <<5S- 0 0 13 -3,-1.3 -1,-0.3 -4,-1.3 -2,-0.2 0.746 122.8-106.9 -60.6 -22.9 0.2 -13.6 -0.7 49 49 A G T <<5S+ 0 0 42 -3,-1.7 2,-0.9 -4,-0.7 3,-0.3 0.013 82.4 125.8 119.5 -27.4 0.7 -16.0 2.1 50 50 A I < + 0 0 0 -5,-0.7 -1,-0.3 1,-0.2 -2,-0.2 -0.533 18.1 136.9 -69.6 102.7 1.1 -13.5 5.0 51 51 A T + 0 0 64 -2,-0.9 -1,-0.2 -3,-0.1 2,-0.1 0.616 26.9 116.1-118.0 -27.5 -1.6 -14.7 7.5 52 52 A L >> - 0 0 94 -3,-0.3 4,-2.8 1,-0.2 3,-2.4 -0.256 64.0-140.5 -50.1 112.5 0.3 -14.4 10.8 53 53 A M H 3> S+ 0 0 121 1,-0.3 4,-2.0 2,-0.2 5,-0.3 0.867 102.0 62.1 -43.1 -44.5 -1.6 -11.8 12.7 54 54 A G H 34 S+ 0 0 50 2,-0.2 4,-0.4 1,-0.2 -1,-0.3 0.834 121.1 22.7 -53.1 -34.7 1.7 -10.4 13.9 55 55 A H H X> S+ 0 0 42 -3,-2.4 3,-1.6 2,-0.2 4,-1.4 0.880 114.9 61.9 -96.9 -58.5 2.6 -9.7 10.3 56 56 A Q H 3X S+ 0 0 22 -4,-2.8 4,-2.1 1,-0.3 5,-0.4 0.821 104.8 54.9 -36.7 -40.9 -0.7 -9.4 8.5 57 57 A K H 3X S+ 0 0 126 -4,-2.0 4,-2.6 -5,-0.4 -1,-0.3 0.909 107.1 49.6 -62.7 -43.4 -1.4 -6.5 10.8 58 58 A K H <> S+ 0 0 93 -3,-1.6 4,-2.7 -4,-0.4 5,-0.2 0.989 115.6 39.6 -59.2 -64.8 1.8 -4.7 9.8 59 59 A I H X S+ 0 0 0 -4,-1.4 4,-1.8 2,-0.2 3,-0.2 0.961 124.1 38.9 -49.2 -64.4 1.4 -5.0 6.0 60 60 A L H >X S+ 0 0 41 -4,-2.1 4,-3.2 1,-0.3 3,-0.9 0.956 119.0 47.0 -52.3 -57.9 -2.4 -4.2 6.1 61 61 A G H 3X S+ 0 0 36 -4,-2.6 4,-0.7 -5,-0.4 -1,-0.3 0.795 111.7 53.3 -56.1 -28.9 -2.1 -1.6 8.8 62 62 A S H 3X S+ 0 0 14 -4,-2.7 4,-0.8 -5,-0.3 -1,-0.3 0.778 114.2 41.2 -77.1 -27.9 0.8 -0.1 6.9 63 63 A I H