==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=18-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION 09-JUL-03 1UHR . COMPND 2 MOLECULE: SWI/SNF RELATED, MATRIX ASSOCIATED, ACTIN . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR K.YAMADA,K.SAITO,N.NAMEKI,M.INOUE,S.KOSHIBA,M.SHIROUZU, . 93 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6851.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 53.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 12.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 6.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 7.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 20 21.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 134 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 129.4 4.7 -2.1 -16.8 2 2 A S - 0 0 126 0, 0.0 2,-0.2 0, 0.0 0, 0.0 -0.731 360.0-160.7-166.2 110.3 7.4 0.6 -17.4 3 3 A S - 0 0 105 -2,-0.2 0, 0.0 1,-0.2 0, 0.0 -0.543 33.1 -92.2 -92.1 159.5 10.4 1.3 -15.3 4 4 A G - 0 0 46 -2,-0.2 -1,-0.2 3,-0.0 2,-0.2 0.214 32.8-147.7 -55.1-174.4 12.4 4.5 -15.3 5 5 A S - 0 0 109 3,-0.2 3,-0.1 1,-0.1 -1,-0.0 -0.659 62.5 -21.5-167.1 103.3 15.5 5.0 -17.5 6 6 A S S S+ 0 0 127 -2,-0.2 2,-0.2 1,-0.2 -1,-0.1 0.943 111.7 53.2 56.8 95.9 18.5 7.1 -16.6 7 7 A G S S- 0 0 67 -3,-0.1 -1,-0.2 0, 0.0 -3,-0.0 -0.710 97.6 -14.8 137.6 172.6 17.4 9.6 -14.0 8 8 A Q S S- 0 0 169 -2,-0.2 -3,-0.2 1,-0.1 3,-0.0 0.002 75.8-107.0 -40.0 143.1 15.7 9.8 -10.6 9 9 A P - 0 0 70 0, 0.0 2,-1.3 0, 0.0 -1,-0.1 -0.303 37.9 -89.2 -75.0 161.2 13.9 6.6 -9.7 10 10 A P + 0 0 63 0, 0.0 19,-0.6 0, 0.0 2,-0.4 -0.590 58.0 174.1 -75.0 95.0 10.1 6.3 -9.7 11 11 A Q E -A 28 0A 61 -2,-1.3 2,-0.4 17,-0.2 17,-0.3 -0.859 13.9-160.3-107.4 139.4 9.2 7.4 -6.1 12 12 A F E -A 27 0A 60 15,-4.1 15,-1.1 -2,-0.4 2,-0.4 -0.924 21.4-116.4-120.7 144.6 5.7 7.8 -4.9 13 13 A K E -AB 26 83A 70 70,-4.5 70,-3.3 -2,-0.4 2,-0.2 -0.633 30.3-133.5 -80.1 130.4 4.4 9.8 -1.9 14 14 A L E - B 0 82A 5 11,-1.6 68,-0.2 -2,-0.4 67,-0.1 -0.587 28.2 -99.0 -84.6 145.8 2.7 7.7 0.8 15 15 A D > - 0 0 23 66,-0.6 4,-3.3 -2,-0.2 5,-0.2 -0.003 32.0-109.3 -55.0 167.7 -0.6 8.7 2.2 16 16 A P T 4 S+ 0 0 65 0, 0.0 -1,-0.1 0, 0.0 4,-0.1 0.655 122.4 43.6 -75.0 -16.9 -0.7 10.5 5.6 17 17 A R T > S+ 0 0 144 2,-0.1 4,-1.2 3,-0.1 46,-0.1 0.705 123.6 34.9 -97.0 -27.5 -2.1 7.4 7.1 18 18 A L H >>S+ 0 0 0 2,-0.2 4,-2.3 3,-0.2 5,-1.1 0.863 102.8 70.1 -91.7 -46.6 0.2 5.0 5.4 19 19 A A H <5S+ 0 0 18 -4,-3.3 -1,-0.1 1,-0.3 -2,-0.1 0.780 116.1 31.5 -40.8 -30.3 3.3 7.1 5.3 20 20 A R H 45S+ 0 0 199 3,-0.2 -1,-0.3 -5,-0.2 -2,-0.2 0.837 109.4 66.0 -95.6 -44.6 3.2 6.4 9.1 21 21 A L H <5S+ 0 0 40 -4,-1.2 -2,-0.2 1,-0.2 -3,-0.2 0.914 127.1 13.7 -41.2 -59.3 1.6 2.9 9.0 22 22 A L T <5S- 0 0 39 -4,-2.3 -1,-0.2 2,-0.1 -3,-0.2 0.808 103.3-128.0 -87.4 -35.2 4.7 1.5 7.3 23 23 A G < + 0 0 38 -5,-1.1 2,-1.1 1,-0.2 -3,-0.2 0.555 59.9 141.8 95.8 12.7 6.8 4.6 8.0 24 24 A I - 0 0 29 -6,-0.4 -10,-0.3 1,-0.2 3,-0.3 -0.770 31.9-170.7 -91.6 99.2 7.9 5.0 4.4 25 25 A H S S- 0 0 155 -2,-1.1 -11,-1.6 1,-0.2 2,-0.3 0.962 73.4 -20.6 -50.4 -62.8 7.9 8.8 3.8 26 26 A T E S+A 13 0A 41 -13,-0.2 -1,-0.2 -3,-0.1 2,-0.2 -0.846 80.6 145.6-157.4 114.7 8.4 8.4 0.1 27 27 A Q E -A 12 0A 73 -15,-1.1 -15,-4.1 -2,-0.3 -3,-0.0 -0.693 46.1 -75.8-135.3-173.0 9.7 5.4 -1.8 28 28 A T E > -A 11 0A 19 -17,-0.3 4,-1.2 -2,-0.2 -1,-0.2 -0.096 42.0-107.5 -79.3-177.5 9.3 3.5 -5.1 29 29 A R H > S+ 0 0 95 -19,-0.6 4,-3.0 2,-0.2 5,-0.3 0.901 120.9 45.8 -78.4 -44.9 6.4 1.2 -6.1 30 30 A P H 4 S+ 0 0 88 0, 0.0 4,-0.2 0, 0.0 -1,-0.2 0.526 116.1 49.9 -74.9 -6.2 8.5 -2.0 -5.8 31 31 A V H > S+ 0 0 66 3,-0.1 4,-1.4 2,-0.1 -2,-0.2 0.725 117.4 36.9 -99.6 -31.5 9.8 -0.6 -2.5 32 32 A I H X S+ 0 0 0 -4,-1.2 4,-2.3 2,-0.2 5,-0.2 0.923 109.2 59.7 -84.6 -53.3 6.4 0.2 -1.0 33 33 A I H X S+ 0 0 29 -4,-3.0 4,-2.7 1,-0.2 -1,-0.1 0.858 111.7 45.2 -41.4 -43.6 4.4 -2.7 -2.4 34 34 A Q H > S+ 0 0 111 -5,-0.3 4,-3.6 2,-0.2 5,-0.4 0.988 105.1 56.0 -65.3 -62.5 6.9 -4.9 -0.5 35 35 A A H < S+ 0 0 30 -4,-1.4 -1,-0.2 1,-0.3 -2,-0.2 0.774 115.0 45.3 -40.5 -29.6 6.9 -2.9 2.8 36 36 A L H >X S+ 0 0 0 -4,-2.3 3,-2.6 2,-0.2 4,-1.6 0.927 109.6 50.5 -80.7 -51.1 3.2 -3.6 2.5 37 37 A W H 3X S+ 0 0 53 -4,-2.7 4,-2.0 1,-0.3 5,-0.2 0.903 105.6 58.4 -52.5 -44.0 3.4 -7.3 1.6 38 38 A Q H 3X S+ 0 0 102 -4,-3.6 4,-1.5 1,-0.2 -1,-0.3 0.643 105.3 54.0 -60.9 -13.6 5.7 -7.6 4.6 39 39 A Y H <> S+ 0 0 22 -3,-2.6 4,-3.9 -5,-0.4 -2,-0.2 0.893 107.0 44.8 -86.1 -47.3 2.8 -6.3 6.5 40 40 A I H <>S+ 0 0 5 -4,-1.6 5,-1.4 2,-0.2 6,-0.9 0.745 119.8 46.1 -68.0 -23.6 0.2 -8.8 5.4 41 41 A K H <5S+ 0 0 117 -4,-2.0 -2,-0.2 -5,-0.3 -1,-0.2 0.913 121.3 34.5 -82.9 -49.6 2.8 -11.4 6.0 42 42 A T H <5S+ 0 0 94 -4,-1.5 -2,-0.2 -5,-0.2 -3,-0.2 0.905 126.5 40.8 -71.2 -43.9 4.0 -10.2 9.3 43 43 A H T <5S- 0 0 75 -4,-3.9 -1,-0.2 -5,-0.1 -3,-0.2 0.418 103.9-137.4 -83.3 0.7 0.5 -9.0 10.4 44 44 A K T 5 + 0 0 172 -5,-0.2 -3,-0.2 1,-0.2 -4,-0.2 0.903 41.8 163.7 39.7 58.1 -0.8 -12.2 8.8 45 45 A L < + 0 0 9 -5,-1.4 10,-1.8 -6,-0.2 -1,-0.2 0.409 23.6 137.8 -82.6 1.6 -3.6 -10.2 7.3 46 46 A Q B -C 54 0B 96 -6,-0.9 8,-0.3 8,-0.2 5,-0.1 -0.251 67.1-103.7 -52.0 127.8 -4.2 -13.1 5.0 47 47 A D - 0 0 1 6,-1.8 6,-0.1 22,-0.2 -1,-0.1 -0.337 20.6-147.7 -57.9 129.9 -7.9 -13.8 4.6 48 48 A P S S+ 0 0 106 0, 0.0 -1,-0.2 0, 0.0 3,-0.1 0.592 98.2 51.4 -75.0 -11.3 -8.9 -16.8 6.7 49 49 A H S S+ 0 0 117 1,-0.1 2,-0.2 0, 0.0 -3,-0.0 0.915 120.0 19.1 -88.0 -55.1 -11.5 -17.6 4.1 50 50 A E - 0 0 74 1,-0.1 -1,-0.1 0, 0.0 0, 0.0 -0.575 61.2-139.3-111.0 175.2 -9.4 -17.5 0.9 51 51 A R S S+ 0 0 211 -2,-0.2 -1,-0.1 -3,-0.1 -5,-0.0 0.409 103.7 47.7-112.2 -5.1 -5.7 -17.7 0.2 52 52 A E S S+ 0 0 75 -6,-0.0 19,-3.0 19,-0.0 20,-0.2 0.600 102.1 74.3-107.5 -20.9 -5.6 -15.0 -2.4 53 53 A F E - D 0 70B 27 17,-0.3 -6,-1.8 -6,-0.1 2,-0.3 -0.426 64.3-152.4 -90.6 167.7 -7.6 -12.4 -0.4 54 54 A V E -CD 46 69B 0 15,-2.5 15,-1.2 -8,-0.3 2,-0.7 -0.952 12.4-136.5-146.5 121.5 -6.4 -10.3 2.5 55 55 A L - 0 0 46 -10,-1.8 13,-0.2 -2,-0.3 12,-0.1 -0.690 27.4-129.5 -81.0 113.4 -8.6 -8.9 5.3 56 56 A C - 0 0 4 10,-1.0 -1,-0.0 -2,-0.7 -16,-0.0 -0.412 24.8-126.2 -63.9 133.4 -7.5 -5.4 5.9 57 57 A D > - 0 0 68 -2,-0.1 4,-4.5 1,-0.1 5,-0.3 -0.044 38.0 -81.4 -71.0 179.8 -6.9 -4.8 9.6 58 58 A K T 4 S+ 0 0 157 2,-0.2 4,-0.4 1,-0.2 5,-0.1 0.920 134.8 42.8 -48.3 -51.4 -8.5 -2.0 11.6 59 59 A Y T >> S+ 0 0 126 2,-0.2 3,-2.6 1,-0.2 4,-0.8 0.975 116.9 44.3 -59.6 -60.1 -5.9 0.4 10.2 60 60 A L H >>>S+ 0 0 1 1,-0.3 4,-3.4 2,-0.2 3,-1.5 0.888 107.1 61.4 -51.8 -42.8 -6.0 -0.8 6.7 61 61 A Q H 3<5S+ 0 0 82 -4,-4.5 -1,-0.3 1,-0.3 -2,-0.2 0.686 107.5 46.1 -58.0 -17.7 -9.8 -0.9 7.0 62 62 A Q H <45S+ 0 0 146 -3,-2.6 -1,-0.3 -4,-0.4 -2,-0.2 0.564 122.9 34.3 -99.2 -14.4 -9.4 2.8 7.5 63 63 A I H <<5S+ 0 0 25 -3,-1.5 -2,-0.2 -4,-0.8 -3,-0.2 0.833 134.9 21.4-102.5 -57.8 -7.0 3.3 4.6 64 64 A F T <5S- 0 0 12 -4,-3.4 -3,-0.2 -5,-0.1 -4,-0.1 0.862 83.9-152.5 -79.6 -39.6 -8.2 0.8 2.0 65 65 A E < + 0 0 139 -5,-1.5 2,-0.5 1,-0.2 -4,-0.2 0.811 52.8 127.3 68.6 31.1 -11.7 0.5 3.4 66 66 A S - 0 0 33 -6,-0.2 -10,-1.0 1,-0.2 3,-0.2 -0.864 45.1-166.5-124.6 95.6 -11.9 -3.0 2.0 67 67 A Q S S+ 0 0 142 -2,-0.5 -11,-0.5 1,-0.2 2,-0.4 0.876 85.9 10.3 -43.5 -47.0 -13.0 -5.5 4.6 68 68 A R S S+ 0 0 109 -13,-0.2 2,-0.3 -3,-0.1 -1,-0.2 -0.975 78.3 159.4-142.7 124.6 -11.9 -8.2 2.1 69 69 A M E -D 54 0B 9 -15,-1.2 -15,-2.5 -2,-0.4 2,-0.3 -0.902 40.2 -96.9-139.2 166.3 -10.0 -7.8 -1.1 70 70 A K E > -D 53 0B 92 -2,-0.3 3,-3.0 -17,-0.3 4,-0.3 -0.622 30.0-122.8 -86.5 144.2 -7.8 -9.8 -3.5 71 71 A F G > S+ 0 0 48 -19,-3.0 3,-0.9 1,-0.3 -1,-0.1 0.781 117.6 56.2 -53.5 -28.7 -4.1 -9.7 -3.3 72 72 A S G 3 S+ 0 0 90 1,-0.2 -1,-0.3 -20,-0.2 4,-0.1 0.582 100.5 59.1 -79.4 -11.1 -4.1 -8.5 -6.8 73 73 A E G < S+ 0 0 67 -3,-3.0 4,-0.4 1,-0.2 -1,-0.2 0.372 87.1 77.6 -96.2 1.4 -6.4 -5.6 -5.7 74 74 A I S X> S+ 0 0 1 -3,-0.9 4,-1.1 -4,-0.3 3,-0.8 0.911 96.3 43.4 -74.8 -45.3 -3.7 -4.4 -3.3 75 75 A P H 3> S+ 0 0 24 0, 0.0 4,-0.8 0, 0.0 -1,-0.2 0.597 109.5 60.5 -75.0 -11.7 -1.7 -2.8 -6.0 76 76 A Q H 34 S+ 0 0 121 2,-0.2 -2,-0.2 1,-0.1 -3,-0.1 0.626 110.6 39.0 -87.8 -16.7 -4.9 -1.4 -7.5 77 77 A R H X> S+ 0 0 121 -3,-0.8 4,-1.2 -4,-0.4 3,-0.7 0.567 102.6 71.1-105.2 -16.8 -5.7 0.5 -4.3 78 78 A L H 3X S+ 0 0 1 -4,-1.1 4,-3.7 1,-0.2 -2,-0.2 0.908 82.8 70.5 -65.5 -43.5 -2.1 1.5 -3.7 79 79 A H H 3< S+ 0 0 102 -4,-0.8 -1,-0.2 1,-0.3 -2,-0.1 0.816 101.1 49.1 -41.6 -36.2 -2.2 3.9 -6.6 80 80 A A H <4 S+ 0 0 71 -3,-0.7 -1,-0.3 1,-0.2 -2,-0.2 0.947 112.4 43.9 -70.1 -50.8 -4.6 5.9 -4.3 81 81 A L H < S+ 0 0 7 -4,-1.2 -66,-0.6 -3,-0.1 2,-0.6 0.774 105.0 79.7 -64.3 -26.4 -2.2 5.7 -1.3 82 82 A L E < +B 14 0A 14 -4,-3.7 -68,-0.2 -68,-0.2 -56,-0.0 -0.757 66.4 178.3 -88.1 121.4 0.5 6.6 -3.7 83 83 A M E -B 13 0A 55 -70,-3.3 -70,-4.5 -2,-0.6 -3,-0.1 -0.853 37.6 -94.1-123.1 158.5 0.7 10.3 -4.6 84 84 A P - 0 0 82 0, 0.0 2,-2.7 0, 0.0 -72,-0.1 -0.612 28.4-145.3 -75.0 113.7 2.9 12.5 -6.7 85 85 A P S S+ 0 0 57 0, 0.0 -74,-0.0 0, 0.0 -73,-0.0 -0.285 70.9 87.8 -75.0 55.2 5.7 13.9 -4.5 86 86 A E S S- 0 0 134 -2,-2.7 -73,-0.0 1,-0.1 0, 0.0 -0.985 73.9-115.8-151.7 155.7 5.6 17.1 -6.5 87 87 A P + 0 0 122 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.169 20.8 177.6 -75.0-162.2 3.8 20.5 -6.6 88 88 A S - 0 0 132 1,-0.1 0, 0.0 0, 0.0 0, 0.0 0.175 62.4 -14.2-171.6 -40.5 1.5 21.8 -9.4 89 89 A G - 0 0 47 0, 0.0 -1,-0.1 0, 0.0 2,-0.1 -0.956 69.3 -89.0-173.4 158.6 0.2 25.1 -8.3 90 90 A P S S+ 0 0 127 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.344 93.4 37.4 -75.1 157.5 -0.2 27.5 -5.4 91 91 A S S S- 0 0 116 -2,-0.1 2,-0.1 1,-0.0 0, 0.0 0.925 83.4-126.5 65.0 98.6 -3.3 27.4 -3.1 92 92 A S 0 0 126 0, 0.0 -1,-0.0 0, 0.0 0, 0.0 -0.380 360.0 360.0 -73.6 152.8 -4.3 23.8 -2.5 93 93 A G 0 0 125 -2,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.589 360.0 360.0 81.1 360.0 -7.9 22.8 -3.2