==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA-BINDING PROTEIN 03-MAR-09 2WBR . COMPND 2 MOLECULE: GW182; . SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; . AUTHOR A.EULALIO,F.TRITSCHLER,R.BUETTNER,O.WEICHENRIEDER, . 89 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6301.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 60.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 22 24.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 23 25.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1110 A G 0 0 137 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 69.9 -16.1 -19.0 -18.9 2 1111 A A - 0 0 103 2,-0.0 2,-0.4 0, 0.0 0, 0.0 -0.798 360.0-142.4-104.3 145.8 -14.4 -16.0 -17.1 3 1112 A M - 0 0 144 -2,-0.3 2,-0.4 2,-0.0 0, 0.0 -0.850 9.6-142.9-107.6 142.2 -10.6 -15.6 -16.8 4 1113 A A - 0 0 102 -2,-0.4 2,-0.4 2,-0.0 -2,-0.0 -0.836 12.0-160.0-104.7 139.6 -8.9 -14.2 -13.6 5 1114 A W - 0 0 200 -2,-0.4 2,-0.4 2,-0.0 -2,-0.0 -0.904 17.1-125.0-117.5 146.7 -5.8 -11.9 -13.8 6 1115 A G - 0 0 72 -2,-0.4 2,-0.3 74,-0.0 47,-0.1 -0.733 28.6-167.1 -89.9 135.0 -3.3 -11.2 -11.0 7 1116 A S - 0 0 55 -2,-0.4 2,-0.4 45,-0.1 45,-0.1 -0.915 27.6-104.7-122.9 148.5 -2.8 -7.5 -10.1 8 1117 A S + 0 0 10 42,-0.4 42,-1.3 -2,-0.3 2,-0.4 -0.550 44.1 175.4 -70.3 122.8 -0.1 -5.7 -8.0 9 1118 A W E -A 49 0A 52 -2,-0.4 2,-0.4 40,-0.2 40,-0.2 -0.995 10.3-175.1-130.2 134.1 -1.5 -4.8 -4.5 10 1119 A L E -A 48 0A 4 38,-2.2 38,-2.1 -2,-0.4 2,-0.5 -0.990 5.7-165.2-126.5 133.0 0.4 -3.2 -1.6 11 1120 A L E -AB 47 76A 14 65,-2.0 65,-2.5 -2,-0.4 2,-0.4 -0.962 5.5-162.1-115.6 123.0 -1.0 -2.5 1.9 12 1121 A L E +AB 46 75A 6 34,-2.4 34,-2.4 -2,-0.5 2,-0.2 -0.851 18.2 179.2-103.2 139.9 0.9 -0.2 4.2 13 1122 A K E +AB 45 74A 68 61,-2.5 61,-1.9 -2,-0.4 32,-0.2 -0.787 43.1 61.6-137.8 173.1 0.1 -0.3 7.9 14 1123 A N + 0 0 88 30,-1.1 2,-0.4 -2,-0.2 58,-0.3 0.930 60.8 154.3 70.2 47.5 0.9 1.1 11.4 15 1124 A L - 0 0 13 29,-1.6 -1,-0.2 -3,-0.1 58,-0.0 -0.880 45.4-115.0-100.3 139.5 -0.0 4.7 10.6 16 1125 A T > - 0 0 67 -2,-0.4 3,-1.8 1,-0.1 28,-0.2 -0.361 19.7-117.7 -73.2 151.9 -1.1 6.9 13.6 17 1126 A A T 3 S+ 0 0 58 1,-0.3 -1,-0.1 25,-0.1 25,-0.1 0.751 113.4 67.9 -58.4 -20.2 -4.7 8.2 13.8 18 1127 A Q T 3 S+ 0 0 181 23,-0.1 2,-0.5 24,-0.1 -1,-0.3 0.263 75.8 125.2 -86.1 15.2 -3.0 11.7 13.7 19 1128 A I < - 0 0 34 -3,-1.8 2,-0.6 22,-0.2 22,-0.1 -0.633 38.9-176.1 -77.4 122.9 -1.9 11.1 10.0 20 1129 A D - 0 0 139 -2,-0.5 3,-0.3 21,-0.1 4,-0.2 -0.995 21.0-169.7 -91.5 117.8 -2.8 13.6 7.3 21 1130 A G > + 0 0 17 -2,-0.6 4,-0.8 1,-0.2 -2,-0.1 -0.516 49.4 112.7-119.8 68.6 -1.2 11.6 4.5 22 1131 A P H > S+ 0 0 80 0, 0.0 4,-2.6 0, 0.0 5,-0.2 0.773 93.1 43.7 -83.7 -45.1 -1.1 13.6 1.3 23 1132 A T H > S+ 0 0 109 -3,-0.3 4,-2.2 2,-0.2 5,-0.2 0.889 113.4 53.5 -60.8 -37.4 2.7 13.6 1.7 24 1133 A L H > S+ 0 0 31 -4,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.962 110.9 44.6 -63.3 -49.2 2.4 9.9 2.5 25 1134 A R H X S+ 0 0 94 -4,-0.8 4,-1.9 1,-0.2 -2,-0.2 0.933 112.0 52.5 -60.2 -44.5 0.4 9.2 -0.7 26 1135 A T H X S+ 0 0 66 -4,-2.6 4,-2.0 1,-0.2 -1,-0.2 0.914 105.6 55.3 -61.3 -40.3 2.9 11.3 -2.8 27 1136 A L H X S+ 0 0 60 -4,-2.2 4,-1.8 1,-0.2 -1,-0.2 0.928 106.2 51.1 -58.3 -43.5 5.8 9.3 -1.4 28 1137 A C H X S+ 0 0 2 -4,-1.7 4,-2.1 1,-0.2 -1,-0.2 0.917 107.5 53.3 -62.1 -40.8 4.2 6.0 -2.6 29 1138 A M H < S+ 0 0 87 -4,-1.9 -1,-0.2 1,-0.2 -2,-0.2 0.909 105.9 53.6 -61.3 -40.2 3.7 7.5 -6.1 30 1139 A Q H < S+ 0 0 147 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.910 108.7 49.2 -62.7 -40.3 7.4 8.4 -6.3 31 1140 A H H < S- 0 0 90 -4,-1.8 -1,-0.2 1,-0.2 -2,-0.2 0.921 132.4 -6.0 -65.9 -41.9 8.4 4.8 -5.4 32 1141 A G S < S- 0 0 5 -4,-2.1 -1,-0.2 -5,-0.2 2,-0.0 -0.987 87.2 -82.7-150.2 157.6 6.1 3.3 -8.1 33 1142 A P - 0 0 55 0, 0.0 18,-0.6 0, 0.0 2,-0.6 -0.343 45.5-142.0 -61.0 140.0 3.4 4.5 -10.5 34 1143 A L E +C 50 0A 31 1,-0.2 16,-0.2 16,-0.1 3,-0.1 -0.909 27.5 174.5-113.5 117.9 -0.0 4.9 -8.8 35 1144 A V E S- 0 0 93 14,-1.4 2,-0.3 -2,-0.6 -1,-0.2 0.898 78.6 -12.7 -79.6 -46.1 -3.3 3.9 -10.5 36 1145 A S E -C 49 0A 48 13,-0.6 13,-2.1 2,-0.0 2,-0.4 -0.988 62.7-172.6-155.6 144.6 -5.4 4.5 -7.3 37 1146 A F E -C 48 0A 3 -2,-0.3 11,-0.2 11,-0.2 -12,-0.0 -0.995 8.4-175.2-142.1 135.9 -4.8 5.1 -3.6 38 1147 A H E -C 47 0A 106 9,-2.4 9,-2.0 -2,-0.4 2,-0.5 -0.871 13.4-170.1-129.1 103.5 -7.0 5.3 -0.5 39 1148 A P E -C 46 0A 50 0, 0.0 2,-0.5 0, 0.0 7,-0.2 -0.766 3.5-163.9 -91.6 130.7 -5.2 6.2 2.7 40 1149 A Y E > -C 45 0A 99 5,-2.4 5,-0.8 -2,-0.5 4,-0.3 -0.959 10.4-176.5-109.4 125.7 -7.0 6.0 6.1 41 1150 A L T 5S+ 0 0 69 -2,-0.5 -22,-0.2 3,-0.2 3,-0.1 0.899 80.4 57.1 -77.0 -44.2 -5.4 7.8 9.1 42 1151 A N T 5S+ 0 0 125 1,-0.3 -25,-0.1 2,-0.1 -1,-0.1 0.938 113.7 36.3 -62.0 -51.3 -8.0 6.6 11.7 43 1152 A Q T 5S- 0 0 117 2,-0.2 -1,-0.3 -26,-0.1 -29,-0.2 0.737 108.1-125.6 -71.0 -20.3 -7.6 2.9 11.2 44 1153 A G T 5S+ 0 0 6 -4,-0.3 -29,-1.6 1,-0.3 -30,-1.1 0.833 72.6 111.9 77.7 31.2 -3.8 3.4 10.6 45 1154 A I E < -AC 13 40A 38 -5,-0.8 -5,-2.4 -32,-0.2 2,-0.3 -0.969 44.6-170.0-132.8 151.3 -3.9 1.6 7.2 46 1155 A A E -AC 12 39A 0 -34,-2.4 -34,-2.4 -2,-0.3 2,-0.4 -0.984 7.0-159.2-140.0 133.9 -3.5 2.7 3.6 47 1156 A L E +AC 11 38A 14 -9,-2.0 -9,-2.4 -2,-0.3 2,-0.3 -0.925 17.0 169.9-114.7 132.9 -4.3 0.6 0.5 48 1157 A C E -AC 10 37A 1 -38,-2.1 -38,-2.2 -2,-0.4 2,-0.4 -0.989 23.2-138.5-143.0 149.7 -2.7 1.3 -3.0 49 1158 A K E -AC 9 36A 65 -13,-2.1 -14,-1.4 -2,-0.3 -13,-0.6 -0.867 14.4-152.4-111.2 141.1 -2.5 -0.4 -6.4 50 1159 A Y E - C 0 34A 2 -42,-1.3 -42,-0.4 -2,-0.4 -16,-0.1 -0.711 21.1-123.4-108.5 162.2 0.6 -0.5 -8.6 51 1160 A T S S+ 0 0 68 -18,-0.6 2,-0.3 -2,-0.2 -43,-0.2 0.916 90.6 24.5 -72.2 -41.7 0.8 -0.8 -12.5 52 1161 A T S > S- 0 0 54 -19,-0.1 4,-1.8 1,-0.1 -1,-0.1 -0.890 74.6-120.5-129.1 155.0 3.0 -3.9 -12.7 53 1162 A R H > S+ 0 0 153 -2,-0.3 4,-2.0 1,-0.2 5,-0.2 0.913 111.0 52.6 -59.1 -42.4 3.7 -6.9 -10.4 54 1163 A E H > S+ 0 0 111 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.921 107.7 49.6 -67.0 -42.3 7.5 -6.2 -10.2 55 1164 A E H > S+ 0 0 72 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.901 109.0 54.7 -62.8 -37.8 7.1 -2.5 -9.1 56 1165 A A H X S+ 0 0 1 -4,-1.8 4,-2.0 2,-0.2 -2,-0.2 0.951 106.8 49.1 -60.9 -48.0 4.7 -3.6 -6.4 57 1166 A N H X S+ 0 0 66 -4,-2.0 4,-2.0 1,-0.2 -1,-0.2 0.925 111.0 50.3 -61.1 -42.3 7.2 -6.1 -4.9 58 1167 A K H X S+ 0 0 156 -4,-1.9 4,-1.8 1,-0.2 -1,-0.2 0.920 108.0 53.6 -61.8 -41.3 9.9 -3.4 -4.8 59 1168 A A H X S+ 0 0 3 -4,-2.1 4,-2.4 1,-0.2 5,-0.3 0.920 108.3 49.7 -61.8 -41.4 7.6 -1.0 -3.1 60 1169 A Q H X S+ 0 0 40 -4,-2.0 4,-2.7 1,-0.2 -1,-0.2 0.921 107.0 54.3 -65.0 -42.0 6.8 -3.5 -0.3 61 1170 A M H < S+ 0 0 154 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.912 114.2 41.2 -61.1 -40.7 10.5 -4.2 0.3 62 1171 A A H < S+ 0 0 50 -4,-1.8 -1,-0.2 1,-0.2 -2,-0.2 0.928 119.9 42.3 -73.2 -44.1 11.3 -0.5 0.8 63 1172 A L H >< S+ 0 0 11 -4,-2.4 3,-1.0 -5,-0.2 -2,-0.2 0.847 97.1 89.7 -74.3 -31.8 8.2 0.4 2.9 64 1173 A N T 3< S+ 0 0 50 -4,-2.7 10,-0.2 -5,-0.3 3,-0.1 -0.371 102.4 3.0 -69.2 141.0 8.3 -2.8 5.1 65 1174 A N T 3 S+ 0 0 114 1,-0.2 2,-0.5 8,-0.1 -1,-0.2 0.866 94.5 154.2 57.2 35.3 10.3 -2.6 8.3 66 1175 A C E < -D 73 0B 38 7,-2.1 7,-2.8 -3,-1.0 2,-0.5 -0.834 30.2-155.2-103.8 128.6 11.0 1.1 7.6 67 1176 A V E +D 72 0B 110 -2,-0.5 2,-0.3 5,-0.2 5,-0.2 -0.861 13.8 176.6-108.0 130.0 11.7 3.5 10.5 68 1177 A L E > -D 71 0B 80 3,-2.4 3,-2.3 -2,-0.5 2,-0.1 -0.838 54.6 -57.1-120.7 166.2 11.1 7.2 10.4 69 1178 A A T 3 S- 0 0 89 -2,-0.3 3,-0.1 1,-0.3 -1,-0.0 -0.172 120.0 -20.4 -48.5 107.8 11.6 9.8 13.2 70 1179 A N T 3 S+ 0 0 169 1,-0.1 2,-0.3 -2,-0.1 -1,-0.3 0.511 126.9 81.0 74.2 6.1 9.4 8.6 16.1 71 1180 A T E < -D 68 0B 34 -3,-2.3 -3,-2.4 2,-0.0 2,-0.4 -0.985 62.7-147.0-140.3 153.3 7.2 6.4 13.8 72 1181 A T E -D 67 0B 53 -2,-0.3 2,-0.5 -58,-0.3 -5,-0.2 -0.966 8.1-158.3-121.9 135.1 7.4 2.9 12.2 73 1182 A I E -D 66 0B 14 -7,-2.8 -7,-2.1 -2,-0.4 2,-0.3 -0.935 9.5-169.9-113.7 130.1 5.9 1.9 8.8 74 1183 A F E -B 13 0A 81 -61,-1.9 -61,-2.5 -2,-0.5 2,-0.4 -0.852 6.5-152.7-116.2 153.1 5.2 -1.8 8.0 75 1184 A A E +B 12 0A 4 -2,-0.3 2,-0.3 -63,-0.2 -63,-0.2 -0.978 16.2 170.7-127.8 137.3 4.3 -3.3 4.6 76 1185 A E E -B 11 0A 93 -65,-2.5 -65,-2.0 -2,-0.4 -2,-0.0 -0.938 31.5-128.6-137.8 162.7 2.2 -6.5 3.9 77 1186 A S - 0 0 78 -2,-0.3 -67,-0.1 -67,-0.2 -65,-0.0 -0.789 27.5-158.0-115.2 90.1 0.7 -8.1 0.8 78 1187 A P - 0 0 18 0, 0.0 -69,-0.1 0, 0.0 5,-0.1 -0.229 27.4-101.0 -62.7 152.9 -3.0 -8.9 1.5 79 1188 A S > - 0 0 62 1,-0.1 4,-2.8 4,-0.0 5,-0.2 -0.329 30.6-109.9 -68.8 157.8 -4.7 -11.6 -0.6 80 1189 A E H > S+ 0 0 102 1,-0.3 4,-1.8 2,-0.2 5,-0.1 0.892 126.8 50.9 -58.0 -36.7 -6.9 -10.6 -3.5 81 1190 A N H > S+ 0 0 114 2,-0.2 4,-1.7 1,-0.2 -1,-0.3 0.906 109.3 50.4 -62.7 -40.1 -9.8 -11.8 -1.4 82 1191 A E H > S+ 0 0 97 1,-0.2 4,-1.8 2,-0.2 -2,-0.2 0.873 105.5 56.6 -68.1 -33.5 -8.4 -9.7 1.5 83 1192 A V H X S+ 0 0 3 -4,-2.8 4,-2.0 1,-0.2 -1,-0.2 0.934 105.8 50.5 -62.3 -43.4 -8.2 -6.7 -0.9 84 1193 A Q H X S+ 0 0 118 -4,-1.8 4,-1.9 1,-0.2 -1,-0.2 0.914 106.2 56.0 -60.8 -40.3 -12.0 -7.1 -1.5 85 1194 A S H < S+ 0 0 77 -4,-1.7 -1,-0.2 1,-0.2 -2,-0.2 0.908 106.3 50.6 -60.3 -40.1 -12.7 -7.2 2.2 86 1195 A I H < S+ 0 0 51 -4,-1.8 -1,-0.2 1,-0.2 -2,-0.2 0.940 107.1 53.4 -63.1 -45.4 -10.9 -3.8 2.6 87 1196 A M H < S+ 0 0 106 -4,-2.0 2,-0.5 -5,-0.1 -1,-0.2 0.872 105.1 64.4 -58.7 -34.8 -13.0 -2.3 -0.2 88 1197 A Q < 0 0 150 -4,-1.9 -1,-0.0 -5,-0.2 0, 0.0 -0.793 360.0 360.0 -93.1 126.4 -16.2 -3.5 1.7 89 1198 A H 0 0 200 -2,-0.5 -1,-0.2 0, 0.0 -2,-0.0 0.968 360.0 360.0 -84.0 360.0 -16.7 -1.9 5.2