==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 25-MAY-04 1WF2 . COMPND 2 MOLECULE: HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEINS C1/C2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA, . 98 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6928.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 59.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 23 23.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 14 14.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 9.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 12.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 95 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 152.1 13.3 -20.2 4.5 2 2 A S - 0 0 134 1,-0.1 2,-0.5 0, 0.0 0, 0.0 -0.363 360.0-162.9 -58.6 124.8 12.9 -17.9 1.5 3 3 A S - 0 0 92 -2,-0.1 2,-0.2 3,-0.0 3,-0.1 -0.962 2.4-151.9-118.1 127.8 9.6 -18.7 -0.2 4 4 A G + 0 0 69 -2,-0.5 0, 0.0 1,-0.2 0, 0.0 -0.623 67.9 32.1 -96.2 155.9 8.8 -17.6 -3.7 5 5 A S S S+ 0 0 128 -2,-0.2 2,-0.3 1,-0.2 -1,-0.2 0.989 87.9 112.6 62.9 82.7 5.4 -16.8 -5.2 6 6 A S - 0 0 86 -3,-0.1 -1,-0.2 2,-0.1 2,-0.0 -0.971 45.4-161.6-169.3 168.4 3.5 -15.4 -2.3 7 7 A G + 0 0 27 -2,-0.3 2,-0.2 40,-0.0 42,-0.0 -0.407 40.2 125.1-165.0 77.4 1.8 -12.3 -0.8 8 8 A K - 0 0 141 2,-0.1 2,-0.4 -2,-0.0 -2,-0.1 -0.586 57.1-110.5-125.0-173.1 1.1 -12.3 2.9 9 9 A T + 0 0 97 -2,-0.2 -2,-0.0 2,-0.0 0, 0.0 -0.820 50.4 145.5-129.3 91.3 1.9 -10.1 5.9 10 10 A D - 0 0 71 -2,-0.4 2,-0.8 3,-0.0 3,-0.3 -0.969 52.8-109.6-129.2 143.8 4.3 -11.7 8.3 11 11 A P + 0 0 135 0, 0.0 -2,-0.0 0, 0.0 4,-0.0 -0.614 67.8 121.4 -75.0 108.6 7.0 -10.2 10.5 12 12 A R S S- 0 0 151 -2,-0.8 0, 0.0 2,-0.0 0, 0.0 0.577 86.1 -28.4-129.9 -57.8 10.3 -11.3 9.0 13 13 A S S S+ 0 0 113 -3,-0.3 2,-0.3 0, 0.0 -3,-0.0 -0.337 98.5 91.8-170.4 75.9 12.4 -8.3 8.1 14 14 A M + 0 0 66 1,-0.1 3,-0.1 3,-0.0 42,-0.0 -0.976 23.9 166.4-163.2 166.9 10.5 -5.1 7.1 15 15 A N + 0 0 137 -2,-0.3 2,-1.1 1,-0.2 -1,-0.1 0.333 69.0 72.4-152.8 -46.5 9.0 -1.9 8.4 16 16 A S + 0 0 5 41,-0.2 2,-0.3 42,-0.1 -1,-0.2 -0.728 66.3 138.6 -87.6 97.4 8.2 0.4 5.5 17 17 A R - 0 0 65 -2,-1.1 68,-0.6 39,-0.2 2,-0.4 -0.984 33.7-163.7-141.3 150.2 5.1 -1.3 3.9 18 18 A V E -AB 55 84A 0 37,-2.0 37,-2.6 -2,-0.3 2,-1.0 -0.974 12.1-148.5-139.6 121.1 1.9 -0.0 2.5 19 19 A F E -AB 54 83A 63 64,-2.1 64,-1.1 -2,-0.4 2,-0.9 -0.773 13.9-161.3 -92.7 99.2 -1.2 -2.2 1.8 20 20 A I E +AB 53 82A 0 33,-3.0 33,-3.1 -2,-1.0 3,-0.3 -0.723 18.9 178.0 -84.0 107.8 -3.0 -0.8 -1.2 21 21 A G E +AB 52 81A 6 60,-2.3 60,-0.7 -2,-0.9 31,-0.2 -0.502 55.6 32.6-104.1 174.5 -6.5 -2.1 -1.1 22 22 A N E S+ 0 0 97 29,-0.7 2,-0.7 1,-0.2 -1,-0.2 0.860 79.5 166.0 46.0 40.7 -9.5 -1.6 -3.3 23 23 A L E -A 51 0A 6 28,-0.7 2,-3.6 -3,-0.3 28,-0.6 -0.807 40.4-138.8 -92.4 114.0 -7.0 -1.3 -6.1 24 24 A N >> + 0 0 32 -2,-0.7 4,-3.8 51,-0.2 3,-3.4 -0.345 35.3 166.4 -69.6 65.5 -8.7 -1.5 -9.5 25 25 A T T 34 + 0 0 33 -2,-3.6 -1,-0.2 1,-0.3 25,-0.1 0.691 67.4 76.0 -55.7 -18.1 -5.9 -3.6 -10.8 26 26 A L T 34 S+ 0 0 161 -3,-0.2 -1,-0.3 1,-0.1 -2,-0.1 0.636 122.1 5.8 -68.2 -13.6 -8.3 -4.3 -13.7 27 27 A V T <4 S+ 0 0 99 -3,-3.4 -2,-0.2 1,-0.1 -1,-0.1 0.542 118.4 78.4-133.0 -48.8 -7.4 -0.8 -14.8 28 28 A V < - 0 0 4 -4,-3.8 2,-0.2 47,-0.1 -1,-0.1 -0.420 66.2-153.8 -70.1 143.7 -4.6 0.5 -12.5 29 29 A K > - 0 0 141 -2,-0.1 4,-0.9 -3,-0.1 5,-0.1 -0.494 27.8-106.4-109.8-179.3 -1.2 -0.8 -13.3 30 30 A K H >> S+ 0 0 80 2,-0.2 4,-2.2 1,-0.2 3,-0.6 0.901 120.9 52.8 -74.3 -43.5 1.9 -1.3 -11.2 31 31 A S H 3> S+ 0 0 90 1,-0.3 4,-1.9 2,-0.2 5,-0.3 0.743 105.9 57.1 -63.0 -23.4 3.7 1.6 -12.7 32 32 A D H 3> S+ 0 0 70 2,-0.2 4,-1.2 1,-0.2 -1,-0.3 0.814 115.4 34.7 -76.1 -32.2 0.6 3.6 -11.8 33 33 A V H << S+ 0 0 1 -4,-0.9 4,-0.4 -3,-0.6 -2,-0.2 0.598 120.8 50.5 -94.5 -16.3 1.0 2.6 -8.2 34 34 A E H < S+ 0 0 75 -4,-2.2 -2,-0.2 2,-0.1 -3,-0.2 0.740 118.8 36.1 -90.4 -28.4 4.8 2.7 -8.4 35 35 A A H < S+ 0 0 58 -4,-1.9 4,-0.4 -5,-0.2 3,-0.3 0.865 116.0 51.7 -89.4 -45.0 4.9 6.1 -10.0 36 36 A I S < S+ 0 0 25 -4,-1.2 3,-0.4 -5,-0.3 -3,-0.2 0.815 118.8 40.1 -60.8 -31.1 2.0 7.7 -8.1 37 37 A F S > S+ 0 0 0 -4,-0.4 3,-1.7 1,-0.2 -1,-0.3 0.568 95.5 80.9 -92.3 -12.9 3.8 6.5 -5.0 38 38 A S T 3 S+ 0 0 75 -3,-0.3 3,-0.4 1,-0.3 -1,-0.2 0.594 88.6 58.4 -67.9 -10.1 7.2 7.4 -6.4 39 39 A K T 3 S+ 0 0 118 -4,-0.4 -1,-0.3 -3,-0.4 -2,-0.2 0.558 101.0 54.7 -93.4 -12.5 6.3 10.9 -5.2 40 40 A Y S < S- 0 0 61 -3,-1.7 26,-0.4 1,-0.5 25,-0.2 0.088 130.7 -52.4-106.3 19.7 5.9 9.7 -1.7 41 41 A G S S- 0 0 12 -3,-0.4 -1,-0.5 24,-0.1 2,-0.2 -0.349 75.8 -57.0 124.3 155.6 9.3 8.2 -1.5 42 42 A K - 0 0 155 -2,-0.1 16,-1.6 -3,-0.1 2,-0.5 -0.438 52.4-133.7 -66.6 134.0 11.5 5.8 -3.5 43 43 A I E +C 57 0A 32 14,-0.2 14,-0.3 -9,-0.2 3,-0.2 -0.805 28.4 173.2 -94.7 127.3 9.9 2.4 -3.9 44 44 A V E S+ 0 0 90 12,-3.7 2,-0.3 -2,-0.5 13,-0.2 0.731 76.8 14.6 -99.8 -32.2 12.1 -0.6 -3.2 45 45 A G E +C 56 0A 33 11,-1.7 11,-1.4 2,-0.0 2,-0.4 -0.904 67.5 166.7-150.6 116.7 9.4 -3.2 -3.5 46 46 A C E +C 55 0A 15 -2,-0.3 2,-0.3 9,-0.3 9,-0.3 -0.992 5.3 174.7-132.9 138.6 6.0 -2.8 -5.0 47 47 A S E -C 54 0A 50 7,-3.6 7,-3.8 -2,-0.4 2,-0.4 -0.992 15.0-157.5-144.2 147.9 3.5 -5.5 -5.9 48 48 A V E -C 53 0A 28 -2,-0.3 2,-0.4 5,-0.3 5,-0.3 -0.985 10.2-174.6-131.4 121.1 -0.1 -5.5 -7.2 49 49 A H E > -C 52 0A 68 3,-2.9 3,-4.5 -2,-0.4 -26,-0.2 -0.957 46.1 -89.9-118.7 132.9 -2.4 -8.5 -6.8 50 50 A K T 3 S+ 0 0 192 -2,-0.4 -26,-0.1 1,-0.3 3,-0.1 -0.118 123.5 24.2 -40.2 99.1 -5.9 -8.8 -8.3 51 51 A G E 3 S-A 23 0A 43 -28,-0.6 -29,-0.7 1,-0.2 -28,-0.7 -0.119 133.3 -1.7 130.9 -34.7 -7.7 -7.3 -5.3 52 52 A F E < -AC 21 49A 70 -3,-4.5 -3,-2.9 -31,-0.2 2,-0.3 -0.903 59.5-138.5-163.4-172.0 -5.0 -5.2 -3.7 53 53 A A E -AC 20 48A 0 -33,-3.1 -33,-3.0 -5,-0.3 2,-0.4 -0.976 8.7-137.1-159.4 161.2 -1.3 -4.2 -3.9 54 54 A F E -AC 19 47A 16 -7,-3.8 -7,-3.6 -2,-0.3 2,-0.4 -0.990 12.3-165.7-131.1 136.5 1.7 -3.6 -1.6 55 55 A V E -AC 18 46A 0 -37,-2.6 -37,-2.0 -2,-0.4 2,-0.5 -0.946 2.6-164.1-122.4 142.1 4.2 -0.8 -1.7 56 56 A Q E - C 0 45A 33 -11,-1.4 -12,-3.7 -2,-0.4 -11,-1.7 -0.940 10.0-164.8-130.3 109.2 7.6 -0.7 0.1 57 57 A Y E - C 0 43A 3 -2,-0.5 -14,-0.2 -14,-0.3 -41,-0.2 -0.319 34.7-110.0 -85.3 171.0 9.4 2.6 0.4 58 58 A V S S+ 0 0 71 -16,-1.6 2,-0.3 1,-0.1 -42,-0.1 0.833 104.3 19.5 -68.7 -33.5 13.0 3.2 1.4 59 59 A N S > S- 0 0 75 -17,-0.2 4,-1.9 1,-0.1 -2,-0.1 -0.940 74.8-124.1-136.4 157.0 11.9 4.6 4.7 60 60 A E H > S+ 0 0 75 -2,-0.3 4,-2.9 2,-0.2 5,-0.5 0.958 108.6 62.2 -63.4 -53.6 8.7 4.3 6.8 61 61 A R H > S+ 0 0 201 1,-0.3 4,-1.0 2,-0.2 -1,-0.2 0.843 107.5 47.0 -39.0 -44.3 8.2 8.1 7.0 62 62 A N H >> S+ 0 0 49 2,-0.2 4,-1.6 1,-0.1 3,-0.6 0.968 113.6 46.2 -64.2 -55.4 7.9 8.0 3.2 63 63 A A H 3X S+ 0 0 0 -4,-1.9 4,-2.7 1,-0.3 3,-0.4 0.962 110.3 51.8 -50.3 -62.7 5.5 5.1 3.2 64 64 A R H 3X S+ 0 0 146 -4,-2.9 4,-1.0 1,-0.2 -1,-0.3 0.776 105.0 62.7 -45.6 -29.2 3.4 6.6 6.0 65 65 A A H XX S+ 0 0 37 -4,-1.0 4,-2.8 -3,-0.6 3,-0.9 0.984 108.7 35.8 -60.9 -61.2 3.3 9.6 3.7 66 66 A A H 3<>S+ 0 0 0 -4,-1.6 5,-1.0 -3,-0.4 -2,-0.2 0.948 110.6 61.9 -57.1 -52.3 1.5 7.9 0.9 67 67 A V H 3<5S+ 0 0 18 -4,-2.7 -1,-0.3 1,-0.3 -2,-0.2 0.787 116.2 35.1 -44.1 -30.0 -0.6 5.9 3.3 68 68 A A H <<5S+ 0 0 70 -4,-1.0 -1,-0.3 -3,-0.9 -2,-0.3 0.776 131.5 32.4 -93.7 -34.5 -1.8 9.3 4.3 69 69 A G T <5S+ 0 0 29 -4,-2.8 -3,-0.2 -5,-0.1 -2,-0.2 0.952 122.0 40.4 -84.2 -74.4 -1.6 10.8 0.9 70 70 A E T > 5S+ 0 0 1 -4,-0.1 3,-0.5 2,-0.1 10,-0.3 0.908 94.5 89.7 -38.5 -66.3 -2.4 8.1 -1.6 71 71 A D T 3 S-D 78 0B 13 3,-2.6 3,-1.3 -2,-1.3 -51,-0.2 -0.880 73.7 -5.4-101.9 120.8 -8.1 5.9 -9.4 76 76 A A T 3 S- 0 0 53 -2,-0.6 -1,-0.2 1,-0.3 3,-0.1 0.470 133.9 -58.4 77.2 1.8 -10.2 4.7 -12.3 77 77 A G T 3 S+ 0 0 48 1,-0.4 2,-0.3 -3,-0.0 -1,-0.3 0.368 121.1 99.1 105.8 -0.0 -13.0 6.7 -10.7 78 78 A Q E < S-D 75 0B 87 -3,-1.3 -3,-2.6 -5,-0.1 -1,-0.4 -0.894 75.0-111.1-120.5 150.0 -12.9 4.8 -7.5 79 79 A V E -D 74 0B 72 -2,-0.3 2,-0.5 -5,-0.3 -5,-0.2 -0.410 27.8-130.6 -76.1 153.6 -11.3 5.6 -4.2 80 80 A L - 0 0 2 -7,-0.8 -8,-1.6 -10,-0.3 2,-0.9 -0.927 7.6-147.5-111.0 128.9 -8.4 3.6 -2.9 81 81 A D E +B 21 0A 97 -60,-0.7 -60,-2.3 -2,-0.5 2,-0.3 -0.825 30.9 165.7 -98.1 100.9 -8.3 2.2 0.6 82 82 A I E +B 20 0A 1 -2,-0.9 2,-0.3 -62,-0.2 -62,-0.2 -0.834 6.8 166.9-115.6 153.8 -4.7 2.1 1.7 83 83 A N E -B 19 0A 31 -64,-1.1 -64,-2.1 -2,-0.3 2,-0.2 -0.947 43.2 -92.5-164.8 144.0 -3.3 1.7 5.2 84 84 A L E > -B 18 0A 21 -2,-0.3 2,-2.8 -66,-0.2 3,-1.0 -0.406 43.8-115.8 -62.2 128.0 0.1 1.0 6.8 85 85 A A T 3 S+ 0 0 43 -68,-0.6 -1,-0.1 1,-0.2 -67,-0.0 -0.413 104.5 57.5 -67.3 77.0 0.5 -2.8 7.3 86 86 A A T 3 S+ 0 0 85 -2,-2.8 -1,-0.2 0, 0.0 -2,-0.0 0.152 97.9 47.5-165.8 -53.3 0.6 -2.5 11.0 87 87 A E S < S- 0 0 146 -3,-1.0 2,-0.2 2,-0.0 -3,-0.1 -0.892 73.0-152.9-112.7 101.8 -2.5 -0.8 12.3 88 88 A P - 0 0 97 0, 0.0 2,-2.5 0, 0.0 -3,-0.0 -0.529 20.0-126.8 -74.9 135.8 -5.7 -2.4 10.8 89 89 A K + 0 0 158 -2,-0.2 2,-0.4 0, 0.0 3,-0.2 -0.335 53.9 156.5 -78.3 57.3 -8.7 -0.1 10.6 90 90 A V - 0 0 97 -2,-2.5 0, 0.0 1,-0.2 0, 0.0 -0.745 59.9 -3.1 -90.1 130.8 -10.8 -2.7 12.4 91 91 A N - 0 0 138 -2,-0.4 -1,-0.2 1,-0.0 0, 0.0 0.923 66.6-157.3 52.8 98.7 -13.8 -1.4 14.3 92 92 A R S S+ 0 0 232 -3,-0.2 4,-0.1 4,-0.0 -2,-0.1 0.979 72.8 71.6 -67.2 -59.1 -13.8 2.4 13.9 93 93 A S S S+ 0 0 117 2,-0.1 0, 0.0 3,-0.0 0, 0.0 -0.334 78.6 68.0 -61.4 138.2 -16.0 3.1 16.9 94 94 A G S S- 0 0 51 2,-0.1 2,-1.5 -2,-0.0 0, 0.0 -0.573 96.3 -53.3 133.0 164.6 -14.2 2.5 20.2 95 95 A P - 0 0 136 0, 0.0 2,-0.8 0, 0.0 -2,-0.1 -0.573 55.0-162.0 -75.0 90.8 -11.4 3.9 22.4 96 96 A S + 0 0 115 -2,-1.5 2,-0.3 -4,-0.1 -2,-0.1 -0.669 33.5 131.3 -79.3 109.9 -8.5 3.8 19.9 97 97 A S 0 0 122 -2,-0.8 0, 0.0 1,-0.1 0, 0.0 -0.984 360.0 360.0-158.0 152.4 -5.3 3.9 21.9 98 98 A G 0 0 112 -2,-0.3 -1,-0.1 0, 0.0 -2,-0.0 0.767 360.0 360.0 111.2 360.0 -1.9 2.2 22.1