==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 28-MAY-04 1WGK . COMPND 2 MOLECULE: RIKEN CDNA 2900073H19 PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR C.ZHAO,K.SAITO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN . 114 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7557.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 65 57.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 6 5.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 17 14.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 10.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 12.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 135 0, 0.0 3,-0.4 0, 0.0 2,-0.3 0.000 360.0 360.0 360.0 97.6 3.5 18.4 -33.4 2 2 A S + 0 0 113 1,-0.2 0, 0.0 2,-0.1 0, 0.0 -0.795 360.0 17.2-106.9 148.7 7.0 16.9 -33.7 3 3 A S S S+ 0 0 125 -2,-0.3 -1,-0.2 2,-0.1 3,-0.1 0.894 81.1 143.2 61.8 41.2 10.1 17.8 -31.6 4 4 A G - 0 0 66 -3,-0.4 2,-0.3 1,-0.3 -2,-0.1 0.990 62.0 -16.4 -73.6 -75.2 7.9 19.5 -29.0 5 5 A S - 0 0 121 0, 0.0 2,-0.3 0, 0.0 -1,-0.3 -0.870 53.6-157.0-131.9 164.8 9.5 18.8 -25.6 6 6 A S + 0 0 128 -2,-0.3 0, 0.0 1,-0.1 0, 0.0 -0.959 50.3 88.0-148.0 125.2 12.0 16.3 -24.1 7 7 A G + 0 0 75 -2,-0.3 2,-0.9 2,-0.1 -1,-0.1 0.369 35.5 172.6 150.3 57.4 12.5 15.2 -20.6 8 8 A M - 0 0 166 1,-0.1 32,-0.1 30,-0.0 31,-0.1 -0.773 38.0-119.2 -90.8 106.9 10.4 12.2 -19.5 9 9 A A - 0 0 54 -2,-0.9 29,-0.2 30,-0.3 31,-0.1 0.118 32.4-109.3 -37.1 155.7 11.5 11.1 -16.1 10 10 A A - 0 0 77 27,-0.1 29,-0.3 1,-0.1 2,-0.3 -0.502 37.0 -85.2 -92.3 162.7 12.8 7.5 -15.8 11 11 A P - 0 0 91 0, 0.0 2,-0.3 0, 0.0 27,-0.2 -0.486 43.4-146.5 -69.7 128.6 11.2 4.5 -14.2 12 12 A L E -A 36 0A 16 24,-0.9 24,-1.6 25,-0.6 2,-0.4 -0.693 4.1-144.1 -97.6 150.2 11.8 4.2 -10.4 13 13 A C E +A 35 0A 65 -2,-0.3 83,-1.0 22,-0.3 84,-0.6 -0.936 17.4 180.0-117.3 136.3 12.2 0.9 -8.5 14 14 A V E -Ab 34 97A 3 20,-2.3 20,-2.6 -2,-0.4 2,-0.8 -0.996 26.2-130.0-137.0 140.5 10.9 0.3 -5.0 15 15 A K E -Ab 33 98A 89 82,-0.8 84,-1.2 -2,-0.4 2,-0.4 -0.792 26.5-166.4 -92.8 109.0 11.1 -2.8 -2.7 16 16 A V E -Ab 32 99A 0 16,-2.6 16,-3.1 -2,-0.8 2,-0.4 -0.810 6.3-176.6 -98.6 133.0 7.6 -3.5 -1.3 17 17 A E E -Ab 31 100A 75 82,-2.3 84,-2.6 -2,-0.4 2,-0.4 -0.991 8.6-160.2-132.0 136.7 7.3 -6.0 1.6 18 18 A F E - b 0 101A 2 12,-1.2 84,-0.2 11,-0.4 3,-0.1 -0.935 16.2-130.5-118.2 138.3 4.1 -7.2 3.3 19 19 A G > - 0 0 20 82,-1.2 4,-1.0 -2,-0.4 2,-0.4 0.466 58.3 -42.2 -60.1-149.1 3.9 -8.8 6.8 20 20 A G T 4 S+ 0 0 66 1,-0.2 83,-0.3 2,-0.1 -1,-0.2 -0.717 124.9 11.9 -89.3 131.5 2.1 -12.1 7.5 21 21 A G T 4 S+ 0 0 39 -2,-0.4 4,-0.5 -3,-0.1 3,-0.2 -0.276 116.9 68.0 103.3 -47.3 -1.2 -12.7 5.8 22 22 A A T >4 S+ 0 0 2 1,-0.2 3,-1.9 2,-0.2 4,-0.4 0.897 85.3 68.8 -72.3 -42.0 -1.1 -9.8 3.3 23 23 A E G ><>S+ 0 0 44 -4,-1.0 3,-2.3 1,-0.3 6,-0.9 0.843 91.5 63.7 -44.6 -39.0 1.8 -11.3 1.3 24 24 A L G 3>5S+ 0 0 124 1,-0.3 4,-0.8 4,-0.3 -1,-0.3 0.882 92.6 61.0 -54.8 -40.6 -0.7 -14.0 0.2 25 25 A L G <45S+ 0 0 32 -3,-1.9 33,-1.9 -4,-0.5 34,-1.1 0.576 107.5 52.0 -64.4 -7.1 -2.7 -11.2 -1.5 26 26 A F T X45S- 0 0 0 -3,-2.3 3,-1.1 -4,-0.4 -1,-0.2 -0.761 138.0 -64.6-134.9 88.2 0.4 -10.7 -3.6 27 27 A D T 345S- 0 0 107 -2,-0.3 -3,-0.2 1,-0.3 -2,-0.1 0.761 86.3 -87.9 40.1 28.1 1.8 -13.9 -5.2 28 28 A G T 3<> -E 92 0B 16 -2,-0.5 4,-2.9 48,-0.3 3,-0.9 -0.720 34.2-109.0-101.5 151.7 3.4 9.6 -4.8 45 45 A I H 3> S+ 0 0 3 46,-1.0 4,-2.2 -2,-0.3 44,-0.1 0.880 116.5 64.6 -40.7 -50.1 1.9 7.1 -2.3 46 46 A R H 3> S+ 0 0 124 43,-0.5 4,-0.7 45,-0.3 -1,-0.3 0.903 114.5 29.8 -40.4 -57.2 -1.6 8.3 -3.4 47 47 A N H X> S+ 0 0 56 -3,-0.9 3,-1.3 1,-0.2 4,-1.3 0.934 107.5 71.6 -71.3 -48.0 -1.0 6.9 -6.9 48 48 A L H 3X S+ 0 0 0 -4,-2.9 4,-3.0 1,-0.3 3,-0.4 0.822 93.7 59.8 -35.3 -42.7 1.3 4.1 -5.7 49 49 A L H 3X S+ 0 0 0 -4,-2.2 4,-2.7 19,-0.3 -1,-0.3 0.941 97.5 56.5 -54.4 -52.2 -1.8 2.5 -4.3 50 50 A V H << S+ 0 0 48 -3,-1.3 4,-0.4 -4,-0.7 5,-0.3 0.859 114.7 40.5 -48.4 -39.8 -3.5 2.3 -7.7 51 51 A W H >X>S+ 0 0 39 -4,-1.3 3,-1.9 -3,-0.4 4,-1.6 0.977 117.0 44.2 -74.3 -59.6 -0.5 0.3 -8.9 52 52 A I H 3<>S+ 0 0 0 -4,-3.0 5,-2.6 1,-0.3 -2,-0.2 0.710 114.0 55.3 -58.6 -19.3 0.1 -1.9 -5.9 53 53 A K T 3<5S+ 0 0 29 -4,-2.7 -1,-0.3 -5,-0.3 -2,-0.2 0.646 127.5 15.6 -87.5 -17.4 -3.7 -2.4 -5.9 54 54 A K T <45S+ 0 0 146 -3,-1.9 -2,-0.2 -4,-0.4 -3,-0.2 0.700 131.0 38.8-117.4 -65.9 -3.7 -3.6 -9.5 55 55 A N T <5S+ 0 0 96 -4,-1.6 -3,-0.2 -5,-0.3 -4,-0.1 0.979 134.2 20.1 -52.4 -69.4 -0.2 -4.5 -10.7 56 56 A L T > - 0 0 159 1,-0.1 4,-1.0 -2,-0.1 3,-0.6 -0.296 41.4-147.2 -58.8 134.8 -9.7 -8.3 -4.5 61 61 A P H 3> S+ 0 0 44 0, 0.0 4,-1.1 0, 0.0 3,-0.3 0.923 92.2 71.0 -69.7 -46.6 -8.6 -4.8 -3.2 62 62 A E H 34 S+ 0 0 102 1,-0.3 4,-0.1 2,-0.2 -2,-0.1 0.748 101.8 51.1 -42.8 -25.2 -11.6 -4.3 -0.9 63 63 A L H <4 S+ 0 0 100 -3,-0.6 -1,-0.3 2,-0.1 3,-0.1 0.931 125.3 20.9 -80.0 -50.5 -9.9 -7.1 1.1 64 64 A F H < S+ 0 0 0 -4,-1.0 7,-0.3 -3,-0.3 2,-0.3 0.966 136.1 1.4 -81.7 -66.0 -6.5 -5.5 1.3 65 65 A I < - 0 0 0 -4,-1.1 2,-0.5 5,-0.1 -1,-0.3 -0.922 58.6-147.9-127.3 152.7 -7.1 -1.8 0.6 66 66 A Q - 0 0 113 3,-0.6 3,-0.4 -2,-0.3 2,-0.1 -0.913 64.6 -24.5-124.2 104.7 -10.2 0.3 -0.1 67 67 A G S S- 0 0 30 -2,-0.5 4,-0.1 1,-0.2 -2,-0.0 -0.457 106.9 -41.0 94.5-169.5 -9.8 3.3 -2.3 68 68 A D S S+ 0 0 89 -2,-0.1 2,-0.3 2,-0.1 -19,-0.3 0.632 126.1 65.7 -70.1 -13.0 -6.8 5.4 -3.2 69 69 A S S S- 0 0 49 -3,-0.4 -3,-0.6 -20,-0.1 2,-0.2 -0.769 95.5 -99.1-110.8 156.5 -5.9 5.1 0.5 70 70 A V - 0 0 11 -2,-0.3 -5,-0.1 -5,-0.2 -2,-0.1 -0.505 49.9 -94.3 -74.6 138.3 -4.9 2.1 2.7 71 71 A R - 0 0 82 -7,-0.3 -1,-0.1 -2,-0.2 3,-0.1 0.097 39.8-100.4 -44.3 162.6 -7.6 0.6 4.8 72 72 A P S S+ 0 0 125 0, 0.0 -1,-0.2 0, 0.0 -7,-0.1 0.421 124.1 43.6 -69.7 3.4 -8.0 1.7 8.4 73 73 A G S S+ 0 0 5 1,-0.1 31,-1.0 2,-0.0 2,-0.8 0.663 87.6 91.6-117.8 -31.3 -6.1 -1.4 9.4 74 74 A I E -C 103 0A 7 -10,-0.2 2,-0.6 29,-0.2 29,-0.2 -0.582 62.7-159.0 -73.1 108.0 -3.3 -1.7 6.9 75 75 A L E -C 102 0A 79 27,-1.9 27,-2.9 -2,-0.8 2,-0.3 -0.797 6.4-160.9 -93.5 121.2 -0.3 0.1 8.4 76 76 A V E -C 101 0A 3 -2,-0.6 7,-0.9 25,-0.2 2,-0.4 -0.677 5.5-164.5-100.3 155.0 2.3 1.3 6.0 77 77 A L E -CD 100 82A 44 23,-2.1 23,-2.3 -2,-0.3 2,-0.7 -0.934 7.3-154.1-144.1 116.8 6.0 2.2 6.7 78 78 A I E S-C 99 0A 1 3,-2.1 21,-0.2 -2,-0.4 8,-0.0 -0.808 81.8 -22.7 -94.4 116.9 8.3 4.1 4.5 79 79 A N S S- 0 0 85 19,-2.3 -1,-0.2 -2,-0.7 20,-0.1 0.896 129.7 -48.8 51.6 44.5 12.0 3.3 5.1 80 80 A D S S+ 0 0 157 -3,-0.4 2,-0.3 18,-0.3 -1,-0.2 0.936 120.4 107.9 62.3 48.4 11.1 2.2 8.6 81 81 A A S S- 0 0 34 0, 0.0 -3,-2.1 0, 0.0 -1,-0.1 -0.850 79.8-102.9-159.6 118.3 9.1 5.3 9.3 82 82 A D B >> -D 77 0A 68 -2,-0.3 4,-1.2 -5,-0.2 3,-1.2 -0.113 26.6-136.6 -41.8 121.5 5.3 5.7 9.7 83 83 A W H 3> S+ 0 0 11 -7,-0.9 4,-2.5 1,-0.3 -1,-0.2 0.657 99.7 74.1 -58.2 -14.0 4.1 7.3 6.5 84 84 A E H 34 S+ 0 0 111 -8,-0.3 4,-0.4 3,-0.2 -1,-0.3 0.933 97.8 41.8 -65.8 -47.6 2.0 9.5 8.8 85 85 A L H <4 S+ 0 0 136 -3,-1.2 -1,-0.2 2,-0.1 -2,-0.2 0.840 125.6 37.6 -68.8 -33.7 5.0 11.6 9.9 86 86 A L H < S- 0 0 77 -4,-1.2 -2,-0.2 -5,-0.1 -3,-0.2 0.969 133.7 -58.9 -80.9 -66.1 6.4 11.7 6.4 87 87 A G X - 0 0 8 -4,-2.5 4,-1.6 -5,-0.1 -3,-0.2 -0.231 33.7-154.4 173.0 89.2 3.3 12.0 4.2 88 88 A E T 4 S- 0 0 96 -4,-0.4 -4,-0.1 1,-0.2 -1,-0.1 0.866 102.8 -13.1 -34.2 -57.2 0.4 9.6 4.1 89 89 A L T 4 S+ 0 0 49 -44,-0.1 -43,-0.5 -5,-0.1 -1,-0.2 0.388 132.8 72.4-127.7 -5.7 -0.4 10.7 0.5 90 90 A D T 4 S+ 0 0 141 -45,-0.1 -2,-0.2 -46,-0.1 -3,-0.1 0.729 75.9 100.3 -82.8 -24.1 1.7 13.9 0.4 91 91 A Y < - 0 0 67 -4,-1.6 -46,-1.0 -8,-0.2 2,-0.5 -0.269 63.1-149.2 -62.8 148.3 5.0 11.9 0.2 92 92 A Q B -E 44 0B 69 -48,-0.2 -48,-0.3 -47,-0.1 -49,-0.1 -0.858 11.1-139.9-126.3 96.7 6.6 11.5 -3.2 93 93 A L + 0 0 0 -50,-1.0 -50,-0.4 -2,-0.5 3,-0.1 -0.278 23.5 176.9 -55.1 131.3 8.5 8.2 -3.7 94 94 A Q - 0 0 125 1,-0.3 2,-0.3 -52,-0.1 -51,-0.2 0.851 46.1 -62.9-100.5 -70.5 11.7 8.8 -5.6 95 95 A D S S+ 0 0 88 -83,-0.1 -1,-0.3 3,-0.0 -81,-0.1 -0.974 106.7 37.3-170.8 174.9 13.7 5.6 -5.9 96 96 A Q S S+ 0 0 124 -83,-1.0 2,-0.4 -2,-0.3 -82,-0.2 0.745 83.3 144.8 39.7 25.9 15.5 2.8 -4.0 97 97 A D E -b 14 0A 22 -84,-0.6 -82,-0.8 -19,-0.0 2,-0.6 -0.805 43.8-145.7 -97.8 132.3 12.7 3.4 -1.5 98 98 A S E -b 15 0A 45 -2,-0.4 -19,-2.3 -84,-0.2 2,-0.5 -0.858 11.6-162.2-100.9 122.5 11.3 0.4 0.5 99 99 A I E -bC 16 78A 3 -84,-1.2 -82,-2.3 -2,-0.6 2,-0.4 -0.897 2.9-159.0-107.6 128.3 7.6 0.4 1.3 100 100 A L E -bC 17 77A 40 -23,-2.3 -23,-2.1 -2,-0.5 2,-0.4 -0.849 6.1-171.0-107.4 140.8 6.2 -1.8 4.0 101 101 A F E +bC 18 76A 1 -84,-2.6 -82,-1.2 -2,-0.4 2,-0.3 -0.917 7.4 179.2-135.1 108.2 2.6 -2.8 4.3 102 102 A I E - C 0 75A 70 -27,-2.9 -27,-1.9 -2,-0.4 2,-0.5 -0.822 17.9-143.7-109.5 148.4 1.3 -4.7 7.3 103 103 A S E + C 0 74A 40 -2,-0.3 -29,-0.2 -83,-0.3 -83,-0.1 -0.944 25.1 164.0-115.5 119.2 -2.3 -5.9 8.1 104 104 A T + 0 0 99 -31,-1.0 3,-0.1 -2,-0.5 -30,-0.1 -0.284 65.9 62.3-126.3 46.9 -3.6 -5.7 11.6 105 105 A L S S+ 0 0 83 1,-0.1 2,-2.2 3,-0.0 -2,-0.0 0.563 77.9 74.2-132.1 -54.1 -7.4 -6.1 11.0 106 106 A H + 0 0 164 1,-0.2 -1,-0.1 -43,-0.1 -3,-0.1 -0.458 56.1 137.8 -70.6 80.5 -8.2 -9.4 9.4 107 107 A G - 0 0 54 -2,-2.2 -1,-0.2 -3,-0.1 2,-0.1 -0.340 36.5-164.9-123.6 52.2 -7.6 -11.5 12.6 108 108 A G + 0 0 73 1,-0.0 2,-0.3 2,-0.0 -2,-0.1 -0.119 36.0 135.4 -41.1 100.8 -10.5 -14.0 12.5 109 109 A S + 0 0 118 -2,-0.1 3,-0.1 3,-0.0 -2,-0.1 -0.834 13.9 100.8-159.3 115.4 -10.3 -15.3 16.1 110 110 A G + 0 0 67 -2,-0.3 2,-0.7 1,-0.2 -2,-0.0 -0.059 65.7 41.7-151.5-102.0 -13.1 -15.8 18.6 111 111 A P S S- 0 0 138 0, 0.0 -1,-0.2 0, 0.0 2,-0.2 -0.536 70.4-154.5 -69.7 109.3 -14.9 -19.1 19.6 112 112 A S + 0 0 115 -2,-0.7 -3,-0.0 1,-0.1 0, 0.0 -0.533 21.6 175.0 -85.5 152.1 -12.2 -21.7 20.0 113 113 A S 0 0 132 -2,-0.2 -1,-0.1 0, 0.0 0, 0.0 0.682 360.0 360.0-120.7 -50.0 -12.9 -25.5 19.7 114 114 A G 0 0 115 0, 0.0 -2,-0.1 0, 0.0 0, 0.0 0.446 360.0 360.0-111.1 360.0 -9.6 -27.3 19.9