==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER IMMUNE SYSTEM 28-MAY-04 1WGL . COMPND 2 MOLECULE: TOLL-INTERACTING PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.ZHAO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN . 59 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5023.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 32 54.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 23 39.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 121 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 136.4 -19.3 -2.1 8.3 2 2 A S + 0 0 131 1,-0.0 0, 0.0 2,-0.0 0, 0.0 0.986 360.0 115.1 56.7 81.7 -15.8 -2.7 6.8 3 3 A S S S- 0 0 125 35,-0.0 2,-0.2 0, 0.0 -1,-0.0 0.469 84.1 -13.4-138.8 -57.6 -14.0 0.4 7.8 4 4 A G - 0 0 60 1,-0.1 3,-0.2 34,-0.1 4,-0.1 -0.610 48.8-170.3-161.3 92.5 -11.2 -0.2 10.2 5 5 A S S S- 0 0 120 1,-0.2 -1,-0.1 -2,-0.2 2,-0.1 0.944 81.0 -36.1 -45.9 -63.5 -10.9 -3.5 12.0 6 6 A S S S- 0 0 98 1,-0.6 -1,-0.2 2,-0.3 31,-0.0 -0.510 87.4 -78.6-170.2 92.1 -8.2 -2.3 14.3 7 7 A G S S+ 0 0 51 -3,-0.2 -1,-0.6 29,-0.1 -2,-0.1 -0.108 106.2 18.7 46.8-139.7 -5.5 0.1 13.2 8 8 A C S S- 0 0 59 -3,-0.1 2,-0.3 25,-0.1 -2,-0.3 0.057 76.5-167.5 -49.4 168.6 -2.8 -1.6 11.2 9 9 A S > - 0 0 27 1,-0.1 4,-0.6 -4,-0.1 5,-0.1 -0.978 32.7-141.3-161.9 153.4 -3.6 -5.0 9.7 10 10 A E H > S+ 0 0 139 -2,-0.3 4,-2.1 2,-0.1 5,-0.1 0.706 103.1 52.4 -89.1 -24.5 -1.8 -7.9 8.1 11 11 A E H > S+ 0 0 166 2,-0.2 4,-2.7 1,-0.1 5,-0.2 0.985 109.0 44.2 -73.5 -64.4 -4.6 -8.5 5.6 12 12 A D H > S+ 0 0 68 2,-0.2 4,-1.7 1,-0.2 -1,-0.1 0.851 115.9 54.2 -48.3 -38.3 -5.0 -5.0 4.2 13 13 A L H >X S+ 0 0 9 -4,-0.6 4,-2.1 2,-0.2 3,-1.4 0.996 106.0 46.2 -59.2 -71.0 -1.2 -5.1 4.0 14 14 A K H 3X S+ 0 0 126 -4,-2.1 4,-2.5 1,-0.3 -1,-0.2 0.839 107.8 62.6 -39.3 -41.6 -0.7 -8.3 2.1 15 15 A A H 3X S+ 0 0 37 -4,-2.7 4,-1.5 1,-0.2 -1,-0.3 0.932 106.3 42.4 -50.8 -52.3 -3.5 -6.9 -0.2 16 16 A I H - 0 0 111 1,-0.2 4,-3.1 2,-0.0 3,-0.3 -0.823 20.7-143.4-100.1 135.0 9.5 -3.0 -0.3 25 25 A Q H > S+ 0 0 102 -2,-0.4 4,-3.0 1,-0.2 5,-0.4 0.972 102.6 55.1 -56.9 -60.2 7.4 -4.5 2.5 26 26 A E H > S+ 0 0 173 1,-0.2 4,-1.5 2,-0.2 -1,-0.2 0.797 114.2 45.5 -43.4 -33.0 9.0 -2.4 5.2 27 27 A V H > S+ 0 0 47 -3,-0.3 4,-1.3 2,-0.2 -2,-0.2 0.968 108.1 52.5 -75.8 -58.5 8.0 0.5 3.1 28 28 A I H >X S+ 0 0 0 -4,-3.1 4,-2.6 1,-0.3 3,-0.9 0.894 116.6 42.0 -42.3 -51.1 4.4 -0.6 2.3 29 29 A R H 3X S+ 0 0 119 -4,-3.0 4,-3.3 1,-0.3 5,-0.4 0.886 105.9 62.4 -64.9 -40.6 3.9 -1.0 6.1 30 30 A S H 3< S+ 0 0 79 -4,-1.5 4,-0.4 -5,-0.4 -1,-0.3 0.684 112.0 41.1 -58.4 -17.3 5.8 2.2 6.7 31 31 A V H S+ 0 0 0 -4,-2.6 5,-2.9 1,-0.3 6,-0.5 0.872 116.4 46.9 -50.5 -40.7 -0.1 1.8 6.0 33 33 A E T ><5S+ 0 0 128 -4,-3.3 3,-0.6 1,-0.2 -1,-0.3 0.869 114.1 45.6 -69.5 -38.4 1.2 2.6 9.5 34 34 A A T 345S+ 0 0 75 -4,-0.4 -1,-0.2 -5,-0.4 -2,-0.2 0.520 107.1 64.2 -81.0 -6.5 1.7 6.2 8.6 35 35 A Q T ><5S- 0 0 60 -4,-1.3 3,-1.8 -3,-0.2 -1,-0.3 -0.292 120.8-103.3-111.0 44.9 -1.7 6.1 7.0 36 36 A R T < 5S- 0 0 225 -3,-0.6 -3,-0.2 1,-0.3 -2,-0.1 0.763 79.0 -62.5 39.3 29.8 -3.6 5.5 10.2 37 37 A G T 3 - 0 0 73 -3,-1.8 4,-3.7 -6,-0.5 -1,-0.2 -0.872 31.1-168.7-117.8 96.2 -5.7 3.0 5.7 39 39 A K H > S+ 0 0 57 -2,-0.6 4,-4.2 1,-0.2 5,-0.3 0.927 90.7 52.0 -44.5 -58.0 -4.9 0.7 2.8 40 40 A D H > S+ 0 0 119 1,-0.3 4,-3.0 2,-0.2 5,-0.3 0.931 112.7 43.9 -43.6 -61.2 -6.7 3.0 0.4 41 41 A A H > S+ 0 0 30 2,-0.2 4,-3.1 1,-0.2 -1,-0.3 0.905 117.2 48.3 -51.5 -46.0 -4.7 6.0 1.7 42 42 A A H X S+ 0 0 0 -4,-3.7 4,-4.2 2,-0.2 5,-0.3 0.984 109.0 50.4 -58.1 -63.1 -1.6 3.8 1.6 43 43 A I H X S+ 0 0 22 -4,-4.2 4,-3.6 1,-0.3 -2,-0.2 0.891 115.3 44.8 -40.3 -53.0 -2.3 2.5 -1.9 44 44 A N H X S+ 0 0 101 -4,-3.0 4,-2.4 -5,-0.3 -1,-0.3 0.916 114.9 48.8 -59.1 -45.4 -2.7 6.1 -3.0 45 45 A S H X S+ 0 0 31 -4,-3.1 4,-3.6 -5,-0.3 -2,-0.2 0.944 114.3 44.6 -59.3 -51.2 0.3 7.1 -1.1 46 46 A L H < S+ 0 0 5 -4,-4.2 -2,-0.2 2,-0.2 -1,-0.2 0.941 109.1 57.7 -58.3 -50.3 2.4 4.3 -2.5 47 47 A L H < S+ 0 0 85 -4,-3.6 -2,-0.2 -5,-0.3 -1,-0.2 0.930 116.1 34.7 -43.9 -60.1 1.1 5.1 -6.0 48 48 A Q H < S+ 0 0 168 -4,-2.4 -2,-0.2 -5,-0.1 -1,-0.2 0.969 102.3 88.3 -60.4 -57.3 2.3 8.6 -5.8 49 49 A M S < S+ 0 0 100 -4,-3.6 2,-0.1 -5,-0.2 0, 0.0 -0.109 94.6 3.2 -45.4 135.7 5.4 7.7 -3.8 50 50 A G S S- 0 0 70 1,-0.1 2,-0.4 2,-0.0 -3,-0.0 -0.461 101.8 -63.9 84.3-157.6 8.3 6.9 -6.0 51 51 A E - 0 0 188 -2,-0.1 -2,-0.1 3,-0.0 -3,-0.1 -0.982 41.2-154.8-138.5 123.5 8.2 7.0 -9.8 52 52 A E - 0 0 133 -2,-0.4 2,-1.1 -4,-0.1 -2,-0.0 -0.683 31.8-102.5 -97.2 150.8 6.1 4.9 -12.1 53 53 A P - 0 0 119 0, 0.0 -1,-0.0 0, 0.0 -2,-0.0 -0.606 42.4-140.5 -75.0 101.0 6.9 4.1 -15.8 54 54 A S + 0 0 124 -2,-1.1 -3,-0.0 1,-0.0 3,-0.0 -0.053 50.4 96.2 -55.5 162.5 4.7 6.4 -17.7 55 55 A G S S- 0 0 59 2,-0.0 2,-0.2 0, 0.0 -1,-0.0 -0.985 71.8 -7.1 151.8-156.9 3.0 5.2 -20.9 56 56 A P - 0 0 141 0, 0.0 2,-0.4 0, 0.0 0, 0.0 -0.502 55.7-170.5 -75.0 139.7 -0.3 3.7 -22.1 57 57 A S + 0 0 119 -2,-0.2 -3,-0.0 1,-0.1 -2,-0.0 -0.991 30.4 130.5-136.7 125.9 -2.9 2.9 -19.4 58 58 A S 0 0 130 -2,-0.4 -1,-0.1 0, 0.0 0, 0.0 0.522 360.0 360.0-134.0 -58.7 -6.2 1.0 -19.9 59 59 A G 0 0 123 0, 0.0 -2,-0.1 0, 0.0 0, 0.0 0.622 360.0 360.0 84.2 360.0 -6.6 -1.7 -17.4