==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 28-MAY-04 1WGN . COMPND 2 MOLECULE: UBIQUITIN ASSOCIATED PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.ZHAO,T.TOMIZAWA,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA, . 63 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5229.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 66.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 6.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 7.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 50.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 132 0, 0.0 2,-0.3 0, 0.0 15,-0.0 0.000 360.0 360.0 360.0 77.6 -15.6 7.1 -11.5 2 2 A S + 0 0 119 1,-0.0 3,-0.1 0, 0.0 0, 0.0 -0.903 360.0 118.3-173.9 145.2 -17.9 6.9 -8.6 3 3 A S + 0 0 124 1,-0.4 2,-0.1 -2,-0.3 -1,-0.0 0.038 47.8 100.0-172.9 -58.5 -21.6 6.9 -7.7 4 4 A G - 0 0 67 1,-0.1 -1,-0.4 2,-0.0 0, 0.0 -0.299 51.1-162.5 -53.4 119.0 -22.8 3.7 -6.0 5 5 A S S S+ 0 0 121 -2,-0.1 2,-0.3 -3,-0.1 -1,-0.1 0.976 74.2 62.8 -68.2 -58.1 -23.0 4.5 -2.3 6 6 A S S S+ 0 0 119 2,-0.0 -1,-0.0 1,-0.0 -2,-0.0 -0.566 85.4 62.9 -73.9 127.5 -23.0 0.9 -1.1 7 7 A G + 0 0 48 -2,-0.3 4,-0.1 3,-0.0 -1,-0.0 0.550 41.0 156.4 119.4 89.6 -19.8 -1.0 -2.1 8 8 A A S > S+ 0 0 73 2,-0.1 3,-2.1 3,-0.1 4,-0.4 0.850 79.7 45.1-100.5 -60.5 -16.5 0.2 -0.7 9 9 A Y T >> S+ 0 0 198 1,-0.3 4,-1.1 2,-0.2 3,-0.8 0.746 95.8 81.8 -56.5 -24.4 -14.3 -2.9 -0.8 10 10 A S H 3> S+ 0 0 76 1,-0.3 4,-1.9 2,-0.2 -1,-0.3 0.840 80.7 65.8 -49.5 -36.7 -15.7 -3.4 -4.3 11 11 A E H <4 S+ 0 0 111 -3,-2.1 -1,-0.3 1,-0.2 -2,-0.2 0.931 92.7 58.5 -51.2 -52.9 -13.1 -0.8 -5.4 12 12 A L H X4 S+ 0 0 79 -3,-0.8 3,-1.1 -4,-0.4 -1,-0.2 0.900 105.0 51.5 -42.6 -52.4 -10.3 -3.2 -4.5 13 13 A Q H 3< S+ 0 0 167 -4,-1.1 2,-0.3 1,-0.3 -1,-0.2 0.939 130.3 17.6 -51.0 -55.1 -11.7 -5.6 -7.0 14 14 A M T 3< S+ 0 0 159 -4,-1.9 -1,-0.3 6,-0.0 -2,-0.2 -0.572 89.0 175.7-120.5 66.5 -11.9 -3.0 -9.7 15 15 A L < - 0 0 24 -3,-1.1 -3,-0.1 -2,-0.3 -5,-0.0 0.142 34.8 -88.4 -57.5-176.9 -9.5 -0.3 -8.5 16 16 A S > - 0 0 50 1,-0.1 4,-2.8 -15,-0.0 5,-0.2 -0.304 32.5-104.9 -90.9 177.9 -8.7 2.7 -10.6 17 17 A P H > S+ 0 0 104 0, 0.0 4,-1.1 0, 0.0 5,-0.1 0.720 123.3 47.5 -75.0 -22.7 -6.0 3.2 -13.2 18 18 A S H > S+ 0 0 60 2,-0.2 4,-1.2 3,-0.1 5,-0.0 0.791 117.4 41.1 -85.8 -32.6 -4.0 5.3 -10.8 19 19 A E H > S+ 0 0 40 2,-0.2 4,-3.0 3,-0.1 5,-0.2 0.867 112.9 53.7 -81.3 -40.7 -4.4 2.8 -7.9 20 20 A R H X S+ 0 0 112 -4,-2.8 4,-2.9 1,-0.2 5,-0.3 0.938 112.1 44.1 -58.4 -50.6 -3.9 -0.2 -10.1 21 21 A Q H X S+ 0 0 116 -4,-1.1 4,-3.6 2,-0.2 5,-0.2 0.902 112.0 54.1 -61.1 -43.4 -0.6 1.1 -11.4 22 22 A C H X S+ 0 0 11 -4,-1.2 4,-2.2 2,-0.2 5,-0.3 0.968 117.3 35.8 -54.4 -58.7 0.4 2.2 -7.9 23 23 A V H X S+ 0 0 0 -4,-3.0 4,-4.3 2,-0.2 5,-0.4 0.992 121.0 45.4 -57.6 -69.2 -0.2 -1.2 -6.5 24 24 A E H X S+ 0 0 64 -4,-2.9 4,-2.6 1,-0.2 5,-0.3 0.889 111.1 56.6 -39.4 -55.6 1.0 -3.2 -9.5 25 25 A T H >X S+ 0 0 43 -4,-3.6 4,-1.9 -5,-0.3 3,-0.9 0.931 117.1 31.8 -41.7 -69.2 4.0 -0.9 -9.7 26 26 A V H 3X S+ 0 0 0 -4,-2.2 4,-1.4 1,-0.3 5,-0.5 0.935 114.5 60.8 -56.3 -50.0 5.2 -1.6 -6.2 27 27 A V H 3X S+ 0 0 36 -4,-4.3 4,-0.5 1,-0.3 -1,-0.3 0.807 109.2 45.3 -46.9 -32.0 3.9 -5.1 -6.4 28 28 A N H << S+ 0 0 128 -4,-2.6 -1,-0.3 -3,-0.9 -2,-0.3 0.853 101.5 64.1 -79.9 -38.2 6.3 -5.5 -9.3 29 29 A M H < S- 0 0 111 -4,-1.9 -2,-0.2 -5,-0.3 -1,-0.2 0.706 133.8 -85.2 -57.7 -20.1 9.1 -3.8 -7.3 30 30 A G H < S+ 0 0 63 -4,-1.4 2,-0.2 1,-0.2 -3,-0.2 0.755 87.9 120.4 112.6 54.6 8.8 -6.8 -5.0 31 31 A Y < - 0 0 57 -4,-0.5 -1,-0.2 -5,-0.5 2,-0.2 -0.798 59.2 -93.9-135.8 176.9 6.1 -6.0 -2.5 32 32 A S > - 0 0 76 -2,-0.2 4,-0.9 1,-0.1 5,-0.1 -0.480 19.2-137.7 -91.8 164.7 2.8 -7.3 -1.3 33 33 A Y H > S+ 0 0 94 3,-0.2 4,-3.9 2,-0.2 5,-0.2 0.906 100.8 48.3 -86.1 -50.1 -0.7 -6.3 -2.5 34 34 A E H > S+ 0 0 168 2,-0.2 4,-3.1 3,-0.2 5,-0.2 0.951 118.0 41.6 -54.8 -55.3 -2.5 -6.1 0.9 35 35 A C H > S+ 0 0 61 2,-0.2 4,-3.5 1,-0.2 5,-0.3 0.987 118.2 44.7 -55.5 -66.5 0.3 -4.0 2.5 36 36 A V H X S+ 0 0 0 -4,-0.9 4,-3.7 1,-0.2 -1,-0.2 0.888 112.7 55.1 -43.6 -48.2 0.8 -1.8 -0.6 37 37 A L H X S+ 0 0 28 -4,-3.9 4,-2.1 2,-0.2 -1,-0.2 0.960 112.7 39.9 -49.9 -61.8 -2.9 -1.6 -0.8 38 38 A R H X S+ 0 0 157 -4,-3.1 4,-1.6 1,-0.2 3,-0.4 0.942 115.0 52.3 -53.1 -54.2 -3.2 -0.3 2.8 39 39 A A H X>S+ 0 0 0 -4,-3.5 4,-4.2 1,-0.3 5,-0.8 0.895 108.0 53.3 -49.0 -45.5 -0.2 1.9 2.4 40 40 A M H X5S+ 0 0 12 -4,-3.7 4,-1.4 -5,-0.3 -1,-0.3 0.892 112.1 43.0 -57.4 -43.0 -1.7 3.3 -0.7 41 41 A K H <5S+ 0 0 178 -4,-2.1 -1,-0.3 -3,-0.4 -2,-0.2 0.621 120.2 46.9 -77.7 -13.9 -4.9 4.1 1.2 42 42 A K H <5S+ 0 0 124 -4,-1.6 -2,-0.2 -3,-0.4 -3,-0.2 0.926 126.9 22.3 -89.1 -62.7 -2.6 5.3 4.0 43 43 A K H <5S- 0 0 99 -4,-4.2 2,-0.6 1,-0.3 -3,-0.2 0.796 101.6-151.3 -74.8 -30.1 -0.1 7.5 2.2 44 44 A G << - 0 0 24 -4,-1.4 2,-0.7 -5,-0.8 -1,-0.3 -0.858 57.2 -3.0 100.5-123.5 -2.5 8.0 -0.6 45 45 A E S S+ 0 0 135 -2,-0.6 2,-0.1 -3,-0.1 3,-0.1 -0.863 98.1 93.9-113.4 96.4 -1.1 8.6 -4.1 46 46 A N > - 0 0 72 -2,-0.7 4,-3.1 1,-0.1 5,-0.3 -0.356 51.5-157.4 176.8 93.4 2.6 8.7 -4.0 47 47 A I H > S+ 0 0 67 1,-0.3 4,-3.4 2,-0.2 5,-0.2 0.910 98.9 54.9 -40.5 -59.1 4.9 5.8 -4.6 48 48 A E H > S+ 0 0 151 1,-0.2 4,-3.0 2,-0.2 -1,-0.3 0.901 112.1 43.1 -40.9 -57.0 7.7 7.5 -2.7 49 49 A Q H > S+ 0 0 82 1,-0.2 4,-3.0 -3,-0.2 5,-0.3 0.950 113.5 50.1 -55.7 -54.4 5.4 7.9 0.3 50 50 A I H X S+ 0 0 0 -4,-3.1 4,-2.9 1,-0.2 -1,-0.2 0.831 112.7 50.1 -53.6 -33.7 4.0 4.4 -0.0 51 51 A L H X S+ 0 0 41 -4,-3.4 4,-3.1 -5,-0.3 -1,-0.2 0.924 107.7 51.2 -70.6 -46.6 7.6 3.3 -0.2 52 52 A D H X S+ 0 0 119 -4,-3.0 4,-1.3 -5,-0.2 -2,-0.2 0.914 117.5 40.1 -55.9 -45.9 8.6 5.3 2.9 53 53 A Y H X S+ 0 0 41 -4,-3.0 4,-1.3 2,-0.2 -2,-0.2 0.908 114.0 53.8 -69.7 -44.3 5.7 3.7 4.8 54 54 A L H >X S+ 0 0 2 -4,-2.9 4,-3.2 -5,-0.3 3,-1.0 0.971 103.6 54.8 -53.3 -62.2 6.3 0.3 3.2 55 55 A F H 3< S+ 0 0 109 -4,-3.1 -1,-0.2 1,-0.3 -2,-0.2 0.856 99.3 64.1 -37.8 -50.0 9.9 0.1 4.3 56 56 A A H 3< S+ 0 0 78 -4,-1.3 -1,-0.3 -5,-0.2 -2,-0.2 0.910 116.6 27.4 -40.6 -59.0 8.8 0.7 7.8 57 57 A H H << S+ 0 0 118 -4,-1.3 -2,-0.2 -3,-1.0 -1,-0.2 0.957 117.3 70.8 -69.9 -53.3 7.0 -2.6 7.8 58 58 A S S < S- 0 0 55 -4,-3.2 -27,-0.0 -5,-0.2 0, 0.0 0.005 92.7-100.5 -57.5 170.3 9.2 -4.2 5.2 59 59 A G - 0 0 49 2,-0.1 2,-0.8 1,-0.1 -1,-0.1 -0.616 36.1 -95.0 -97.2 157.7 12.8 -5.1 6.1 60 60 A P + 0 0 119 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.613 64.7 138.8 -75.0 107.0 16.0 -3.3 5.3 61 61 A S - 0 0 107 -2,-0.8 2,-0.8 0, 0.0 -2,-0.1 -0.646 32.7-164.5-153.6 88.1 17.3 -4.8 2.1 62 62 A S 0 0 124 1,-0.2 0, 0.0 -2,-0.2 0, 0.0 -0.672 360.0 360.0 -79.6 109.8 18.7 -2.5 -0.5 63 63 A G 0 0 127 -2,-0.8 -1,-0.2 0, 0.0 0, 0.0 0.920 360.0 360.0 90.8 360.0 19.0 -4.5 -3.7