==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIGASE 13-OCT-04 1WR7 . COMPND 2 MOLECULE: NEDD4-2; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR K.KOWALSKI,A.L.MERKEL,G.W.BOOKER . 41 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3620.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 23 56.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 24.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 19.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 12.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G > 0 0 78 0, 0.0 3,-1.9 0, 0.0 4,-0.1 0.000 360.0 360.0 360.0 138.7 -20.6 -9.2 -11.7 2 2 A S T 3 + 0 0 130 1,-0.3 0, 0.0 2,-0.1 0, 0.0 0.873 360.0 60.4 -48.8 -51.3 -24.2 -9.6 -10.4 3 3 A P T 3 S- 0 0 110 0, 0.0 -1,-0.3 0, 0.0 3,-0.1 0.650 116.3-110.2 -56.6 -15.3 -23.3 -9.1 -6.6 4 4 A G < + 0 0 39 -3,-1.9 2,-1.0 1,-0.3 -2,-0.1 0.597 63.0 157.5 93.4 12.4 -22.0 -5.6 -7.5 5 5 A I - 0 0 103 -4,-0.1 2,-0.5 1,-0.1 -1,-0.3 -0.618 37.0-142.4 -74.0 101.3 -18.4 -6.5 -6.9 6 6 A Q - 0 0 161 -2,-1.0 2,-2.3 1,-0.1 3,-0.3 -0.563 11.6-134.2 -68.4 116.2 -16.5 -3.9 -9.0 7 7 A S + 0 0 107 -2,-0.5 -1,-0.1 1,-0.2 -2,-0.0 -0.456 61.0 128.4 -76.6 73.4 -13.5 -5.8 -10.5 8 8 A F S S- 0 0 114 -2,-2.3 -1,-0.2 1,-0.3 -3,-0.0 0.900 80.7 -7.7 -83.3 -76.5 -10.8 -3.2 -9.7 9 9 A L S S- 0 0 18 -3,-0.3 -1,-0.3 4,-0.2 6,-0.0 -0.513 105.8 -58.9-105.4 178.7 -8.2 -5.4 -8.0 10 10 A P > - 0 0 66 0, 0.0 3,-2.9 0, 0.0 -1,-0.2 -0.299 59.0-105.2 -54.3 147.2 -8.6 -9.0 -6.9 11 11 A P T 3 S+ 0 0 134 0, 0.0 -4,-0.0 0, 0.0 -5,-0.0 0.331 120.4 61.0 -63.8 10.0 -11.5 -9.5 -4.4 12 12 A G T 3 S+ 0 0 17 2,-0.0 16,-3.1 15,-0.0 2,-0.5 0.363 87.1 88.0-112.0 -0.2 -9.0 -9.8 -1.6 13 13 A W E < -A 27 0A 61 -3,-2.9 2,-0.6 14,-0.2 -4,-0.2 -0.876 59.5-162.3-104.7 128.8 -7.5 -6.4 -2.1 14 14 A E E -A 26 0A 71 12,-2.8 12,-3.1 -2,-0.5 2,-0.7 -0.926 5.0-155.3-115.0 111.3 -9.1 -3.4 -0.3 15 15 A M E -A 25 0A 91 -2,-0.6 2,-0.4 10,-0.3 10,-0.3 -0.765 17.9-179.1 -85.5 115.4 -8.3 0.1 -1.6 16 16 A R E -A 24 0A 141 8,-3.3 8,-3.6 -2,-0.7 2,-1.0 -0.916 28.0-126.9-113.9 142.6 -8.7 2.6 1.2 17 17 A I E -A 23 0A 107 -2,-0.4 -2,-0.0 6,-0.3 8,-0.0 -0.776 27.1-147.2 -93.1 101.8 -8.1 6.3 0.8 18 18 A A > - 0 0 11 4,-1.9 3,-2.9 -2,-1.0 4,-0.2 -0.241 28.4-106.6 -62.0 153.8 -5.7 7.4 3.5 19 19 A P T 3 S+ 0 0 139 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.676 117.3 75.8 -55.6 -17.0 -6.0 10.9 5.0 20 20 A N T 3 S- 0 0 123 2,-0.2 -2,-0.0 1,-0.1 -3,-0.0 0.757 116.2-112.8 -63.6 -26.0 -2.9 11.7 2.9 21 21 A G S < S+ 0 0 53 -3,-2.9 -1,-0.1 1,-0.3 -4,-0.0 0.373 81.0 118.6 103.9 -0.4 -5.2 11.7 -0.1 22 22 A R - 0 0 156 -4,-0.2 -4,-1.9 -6,-0.0 -1,-0.3 -0.871 65.5-126.2-107.1 125.4 -3.7 8.6 -1.6 23 23 A P E -A 17 0A 57 0, 0.0 2,-0.4 0, 0.0 -6,-0.3 -0.537 30.4-166.6 -59.3 123.8 -5.5 5.4 -2.3 24 24 A F E -A 16 0A 40 -8,-3.6 -8,-3.3 -2,-0.3 2,-0.7 -0.969 13.3-138.1-121.2 137.5 -3.7 2.5 -0.6 25 25 A F E -AB 15 34A 11 9,-3.1 9,-2.5 -2,-0.4 2,-0.6 -0.830 14.4-166.8-101.2 112.4 -4.3 -1.1 -1.3 26 26 A I E -AB 14 33A 28 -12,-3.1 -12,-2.8 -2,-0.7 2,-0.4 -0.879 14.8-141.9-100.5 119.2 -4.4 -3.4 1.7 27 27 A D E > -AB 13 32A 6 5,-2.5 5,-0.6 -2,-0.6 4,-0.3 -0.666 10.3-164.9 -83.4 132.4 -4.3 -7.0 0.9 28 28 A H T 5S+ 0 0 93 -16,-3.1 -15,-0.1 -2,-0.4 -1,-0.1 0.294 80.6 66.9-100.8 8.6 -6.4 -9.3 3.0 29 29 A N T 5S+ 0 0 113 -17,-0.2 -1,-0.1 3,-0.1 -16,-0.1 0.910 127.0 2.8 -88.3 -58.3 -4.7 -12.5 1.9 30 30 A T T 5S- 0 0 101 2,-0.1 -2,-0.1 0, 0.0 0, 0.0 0.661 104.8-119.5 -98.9 -23.5 -1.2 -12.0 3.3 31 31 A K T 5 + 0 0 150 -4,-0.3 2,-0.3 1,-0.2 -3,-0.2 0.967 55.9 147.7 78.9 70.3 -2.2 -8.7 5.0 32 32 A T E < -B 27 0A 68 -5,-0.6 -5,-2.5 2,-0.0 2,-0.5 -0.877 39.9-133.7-129.2 166.6 0.1 -6.1 3.5 33 33 A T E +B 26 0A 91 -2,-0.3 2,-0.3 -7,-0.2 -7,-0.2 -0.947 28.2 164.6-128.5 109.9 -0.2 -2.4 2.7 34 34 A T E -B 25 0A 45 -9,-2.5 -9,-3.1 -2,-0.5 -2,-0.0 -0.941 26.7-164.4-124.0 146.8 0.9 -0.9 -0.6 35 35 A W S S+ 0 0 124 -2,-0.3 2,-0.3 -11,-0.3 -1,-0.1 0.790 71.5 88.9 -90.2 -36.2 0.1 2.5 -2.2 36 36 A E S S- 0 0 149 1,-0.1 -11,-0.1 -11,-0.1 -12,-0.0 -0.492 88.6-116.4 -71.9 121.5 1.3 1.5 -5.6 37 37 A D > - 0 0 26 -2,-0.3 3,-1.9 1,-0.2 4,-0.1 -0.414 17.9-151.6 -61.1 115.2 -1.5 -0.1 -7.7 38 38 A P G > S+ 0 0 31 0, 0.0 3,-0.7 0, 0.0 -1,-0.2 0.625 93.1 64.9 -66.4 -12.2 -0.4 -3.7 -8.3 39 39 A R G 3 S+ 0 0 111 1,-0.2 -2,-0.1 0, 0.0 -3,-0.0 0.399 77.2 84.8 -92.3 2.3 -2.4 -3.7 -11.6 40 40 A L G < 0 0 137 -3,-1.9 -1,-0.2 1,-0.0 -3,-0.1 0.581 360.0 360.0 -75.2 -11.3 -0.1 -1.1 -13.0 41 41 A K < 0 0 209 -3,-0.7 -1,-0.0 -4,-0.1 0, 0.0 -0.960 360.0 360.0-138.8 360.0 2.1 -4.0 -14.0