==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 29-MAR-10 2XA6 . COMPND 2 MOLECULE: KH DOMAIN-CONTAINING\,RNA-BINDING\,SIGNAL . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR N.H.MEYER,K.TRIPSIANES,M.VINCENDEAUX,T.MADL,F.KATEB,R.BRACK- . 74 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4950.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 56 75.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 5.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 50 67.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 99 A P >> 0 0 123 0, 0.0 4,-2.9 0, 0.0 3,-0.9 0.000 360.0 360.0 360.0 133.8 -15.1 6.1 -5.1 2 100 A E H 3> + 0 0 118 1,-0.3 4,-2.5 2,-0.2 32,-0.0 0.824 360.0 62.7 -58.5 -39.6 -14.2 6.4 -1.4 3 101 A N H 34 S+ 0 0 148 1,-0.2 -1,-0.3 2,-0.2 31,-0.0 0.854 119.0 26.0 -60.1 -37.4 -17.4 4.8 -0.2 4 102 A K H <> S+ 0 0 118 -3,-0.9 4,-1.3 2,-0.1 -1,-0.2 0.739 116.9 63.3 -93.9 -29.4 -16.6 1.6 -1.9 5 103 A Y H X S+ 0 0 20 -4,-2.9 4,-2.1 1,-0.2 -2,-0.2 0.837 95.9 60.7 -62.3 -35.4 -12.9 2.0 -1.9 6 104 A L H X S+ 0 0 31 -4,-2.5 4,-2.2 1,-0.2 -1,-0.2 0.949 105.6 43.2 -63.1 -53.9 -12.8 2.0 1.9 7 105 A P H > S+ 0 0 57 0, 0.0 4,-2.1 0, 0.0 -1,-0.2 0.800 111.5 57.9 -62.9 -28.6 -14.2 -1.6 2.4 8 106 A E H X S+ 0 0 63 -4,-1.3 4,-2.5 2,-0.2 5,-0.3 0.936 107.3 46.7 -62.5 -45.6 -11.9 -2.7 -0.4 9 107 A L H X S+ 0 0 0 -4,-2.1 4,-3.3 1,-0.2 -1,-0.2 0.920 112.4 49.0 -62.7 -45.8 -8.9 -1.4 1.5 10 108 A M H X S+ 0 0 73 -4,-2.2 4,-2.8 2,-0.2 -1,-0.2 0.871 111.9 49.7 -64.6 -36.2 -10.0 -3.1 4.7 11 109 A A H X S+ 0 0 53 -4,-2.1 4,-0.8 2,-0.2 -2,-0.2 0.937 116.1 40.7 -69.1 -46.3 -10.6 -6.4 2.9 12 110 A E H X S+ 0 0 20 -4,-2.5 4,-1.9 2,-0.2 3,-0.4 0.917 116.4 52.9 -64.8 -42.6 -7.2 -6.3 1.3 13 111 A K H < S+ 0 0 59 -4,-3.3 3,-0.4 -5,-0.3 -2,-0.2 0.954 112.0 42.1 -56.1 -53.4 -5.7 -5.0 4.5 14 112 A D H < S+ 0 0 118 -4,-2.8 -1,-0.2 1,-0.2 -2,-0.2 0.595 120.0 45.1 -77.1 -9.1 -7.1 -7.8 6.7 15 113 A S H < S+ 0 0 86 -4,-0.8 -1,-0.2 -3,-0.4 -2,-0.2 0.607 91.4 100.7-103.7 -18.1 -6.3 -10.4 4.1 16 114 A L S < S- 0 0 10 -4,-1.9 38,-0.0 -3,-0.4 -4,-0.0 -0.405 82.1-106.2 -74.2 143.6 -2.8 -9.2 3.3 17 115 A D > - 0 0 89 1,-0.1 3,-2.0 -2,-0.1 7,-0.2 -0.530 18.4-135.7 -73.1 132.6 0.1 -11.1 4.8 18 116 A P T 3 S+ 0 0 100 0, 0.0 -1,-0.1 0, 0.0 6,-0.1 0.639 96.5 81.1 -63.4 -16.3 1.9 -9.2 7.7 19 117 A S T 3 S+ 0 0 94 1,-0.2 2,-1.3 2,-0.1 3,-0.2 0.731 79.4 73.2 -63.3 -20.5 5.3 -10.1 6.2 20 118 A F <> + 0 0 36 -3,-2.0 4,-2.5 1,-0.2 5,-0.2 -0.704 65.7 172.7 -93.8 82.8 4.7 -7.2 3.9 21 119 A T H > S+ 0 0 87 -2,-1.3 4,-2.5 1,-0.2 -1,-0.2 0.925 75.3 40.2 -58.9 -51.5 5.2 -4.4 6.4 22 120 A H H > S+ 0 0 19 2,-0.2 4,-3.1 1,-0.2 5,-0.2 0.898 115.4 51.1 -70.2 -41.2 5.1 -1.5 3.9 23 121 A A H > S+ 0 0 1 1,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.903 114.9 44.9 -59.0 -41.2 2.2 -2.9 1.9 24 122 A M H X S+ 0 0 32 -4,-2.5 4,-1.8 2,-0.2 -2,-0.2 0.869 113.6 50.3 -70.6 -37.4 0.4 -3.4 5.2 25 123 A Q H X S+ 0 0 103 -4,-2.5 4,-2.7 -5,-0.2 -2,-0.2 0.914 109.8 48.8 -68.4 -43.1 1.4 0.1 6.4 26 124 A L H X S+ 0 0 24 -4,-3.1 4,-2.2 1,-0.2 -1,-0.2 0.876 111.6 50.0 -67.7 -35.9 0.2 1.8 3.2 27 125 A L H X S+ 0 0 0 -4,-1.7 4,-1.6 -5,-0.2 -1,-0.2 0.888 111.7 49.8 -64.8 -38.8 -3.1 -0.0 3.3 28 126 A T H X S+ 0 0 56 -4,-1.8 4,-1.9 1,-0.2 -2,-0.2 0.945 111.1 47.6 -65.8 -47.1 -3.5 1.0 6.9 29 127 A A H X S+ 0 0 22 -4,-2.7 4,-1.8 1,-0.2 -2,-0.2 0.895 108.9 52.4 -63.0 -45.4 -2.7 4.7 6.2 30 128 A E H X S+ 0 0 45 -4,-2.2 4,-1.8 1,-0.2 -1,-0.2 0.886 108.6 51.8 -61.0 -38.4 -5.1 5.0 3.3 31 129 A I H X S+ 0 0 19 -4,-1.6 4,-3.1 1,-0.2 -1,-0.2 0.914 106.3 54.4 -63.7 -41.2 -7.9 3.6 5.4 32 130 A E H X S+ 0 0 117 -4,-1.9 4,-2.7 1,-0.2 5,-0.3 0.886 105.9 53.4 -57.8 -40.5 -7.1 6.2 8.1 33 131 A K H X S+ 0 0 116 -4,-1.8 4,-2.4 2,-0.2 -1,-0.2 0.895 113.3 40.9 -66.1 -42.8 -7.5 9.0 5.5 34 132 A I H < S+ 0 0 29 -4,-1.8 -2,-0.2 2,-0.2 -1,-0.2 0.903 114.5 53.6 -69.6 -41.5 -10.9 7.8 4.4 35 133 A Q H < S+ 0 0 122 -4,-3.1 -2,-0.2 1,-0.2 -1,-0.2 0.896 117.5 36.5 -58.9 -42.5 -11.9 7.1 8.0 36 134 A K H < 0 0 161 -4,-2.7 -1,-0.2 -5,-0.2 -2,-0.2 0.865 360.0 360.0 -79.5 -37.6 -10.9 10.7 9.0 37 135 A G < 0 0 103 -4,-2.4 -1,-0.2 -5,-0.3 -2,-0.1 -0.442 360.0 360.0 72.0 360.0 -12.1 12.3 5.8 38 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 39 99 B P >> 0 0 122 0, 0.0 4,-2.9 0, 0.0 3,-0.8 0.000 360.0 360.0 360.0 134.0 15.2 5.8 5.3 40 100 B E H 3> + 0 0 116 1,-0.3 4,-2.5 2,-0.2 32,-0.0 0.823 360.0 62.8 -58.6 -39.6 14.3 6.1 1.6 41 101 B N H 34 S+ 0 0 148 1,-0.2 -1,-0.3 2,-0.2 31,-0.0 0.861 119.0 25.9 -59.5 -37.9 17.5 4.5 0.4 42 102 B K H <> S+ 0 0 117 -3,-0.8 4,-1.3 2,-0.1 -1,-0.2 0.741 116.9 63.4 -93.6 -29.5 16.6 1.2 2.1 43 103 B Y H X S+ 0 0 22 -4,-2.9 4,-2.1 1,-0.2 -2,-0.2 0.839 95.8 60.6 -62.2 -35.7 12.9 1.8 2.1 44 104 B L H X S+ 0 0 31 -4,-2.5 4,-2.3 1,-0.2 -1,-0.2 0.946 105.6 43.2 -62.9 -53.9 12.8 1.8 -1.7 45 105 B P H > S+ 0 0 56 0, 0.0 4,-2.1 0, 0.0 -1,-0.2 0.808 111.5 58.0 -62.9 -28.7 14.1 -1.8 -2.3 46 106 B E H X S+ 0 0 62 -4,-1.3 4,-2.5 2,-0.2 5,-0.3 0.936 107.3 46.6 -62.5 -45.5 11.8 -2.9 0.6 47 107 B L H X S+ 0 0 0 -4,-2.1 4,-3.3 1,-0.2 -1,-0.2 0.920 112.4 49.1 -62.7 -45.8 8.8 -1.6 -1.4 48 108 B M H X S+ 0 0 74 -4,-2.3 4,-2.8 2,-0.2 -1,-0.2 0.867 111.8 49.6 -64.5 -36.0 9.9 -3.2 -4.6 49 109 B A H X S+ 0 0 54 -4,-2.1 4,-0.8 2,-0.2 -2,-0.2 0.936 116.1 40.8 -69.3 -46.0 10.5 -6.5 -2.8 50 110 B E H X S+ 0 0 21 -4,-2.5 4,-1.9 2,-0.2 3,-0.5 0.916 116.4 52.9 -64.9 -42.4 7.0 -6.4 -1.2 51 111 B K H < S+ 0 0 61 -4,-3.3 3,-0.4 -5,-0.3 -2,-0.2 0.952 112.0 42.0 -56.2 -53.2 5.6 -5.1 -4.4 52 112 B D H < S+ 0 0 118 -4,-2.8 -1,-0.2 1,-0.2 -2,-0.2 0.578 120.0 45.1 -77.6 -8.5 6.9 -7.9 -6.6 53 113 B S H < S+ 0 0 87 -4,-0.8 -1,-0.2 -3,-0.5 -2,-0.2 0.603 91.4 100.8-103.9 -18.2 6.1 -10.5 -4.0 54 114 B L S < S- 0 0 10 -4,-1.9 -38,-0.0 -3,-0.4 -4,-0.0 -0.398 82.0-106.3 -73.8 143.6 2.6 -9.3 -3.2 55 115 B D > - 0 0 88 1,-0.1 3,-1.9 -2,-0.1 7,-0.2 -0.527 18.5-135.7 -73.2 132.9 -0.4 -11.0 -4.8 56 116 B P T 3 S+ 0 0 100 0, 0.0 -1,-0.1 0, 0.0 6,-0.1 0.643 96.5 81.1 -63.6 -16.4 -2.1 -9.1 -7.6 57 117 B S T 3 S+ 0 0 93 1,-0.2 2,-1.2 2,-0.1 3,-0.2 0.726 79.3 73.2 -63.2 -20.5 -5.5 -9.9 -6.1 58 118 B F <> + 0 0 37 -3,-1.9 4,-2.5 1,-0.2 5,-0.2 -0.705 65.8 172.7 -93.7 82.7 -4.8 -7.1 -3.7 59 119 B T H > S+ 0 0 86 -2,-1.2 4,-2.5 1,-0.2 -1,-0.2 0.928 75.3 40.2 -58.9 -51.8 -5.3 -4.3 -6.2 60 120 B H H > S+ 0 0 19 2,-0.2 4,-3.2 1,-0.2 5,-0.2 0.898 115.4 51.2 -69.8 -41.3 -5.2 -1.4 -3.8 61 121 B A H > S+ 0 0 1 1,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.904 114.9 44.7 -58.9 -41.3 -2.3 -2.9 -1.8 62 122 B M H X S+ 0 0 32 -4,-2.5 4,-1.8 2,-0.2 -2,-0.2 0.865 113.7 50.4 -70.5 -37.4 -0.5 -3.4 -5.0 63 123 B Q H X S+ 0 0 104 -4,-2.5 4,-2.7 -5,-0.2 -2,-0.2 0.917 109.8 48.7 -68.4 -43.5 -1.4 0.1 -6.2 64 124 B L H X S+ 0 0 24 -4,-3.2 4,-2.1 1,-0.2 -2,-0.2 0.875 111.6 50.0 -67.5 -36.0 -0.2 1.8 -3.0 65 125 B L H X S+ 0 0 0 -4,-1.7 4,-1.6 -5,-0.2 -1,-0.2 0.886 111.7 49.9 -64.8 -38.6 3.1 -0.1 -3.2 66 126 B T H X S+ 0 0 56 -4,-1.8 4,-1.9 1,-0.2 -2,-0.2 0.944 111.1 47.6 -66.0 -47.0 3.5 1.0 -6.8 67 127 B A H X S+ 0 0 24 -4,-2.7 4,-1.8 1,-0.2 -2,-0.2 0.895 109.0 52.3 -63.0 -45.4 2.8 4.7 -6.0 68 128 B E H X S+ 0 0 47 -4,-2.1 4,-1.8 1,-0.2 -1,-0.2 0.886 108.6 51.8 -61.2 -38.4 5.2 4.9 -3.0 69 129 B I H X S+ 0 0 19 -4,-1.6 4,-3.1 1,-0.2 -1,-0.2 0.917 106.3 54.4 -63.4 -41.5 7.9 3.5 -5.2 70 130 B E H X S+ 0 0 116 -4,-1.9 4,-2.7 1,-0.2 5,-0.3 0.885 105.9 53.3 -57.8 -40.4 7.2 6.1 -7.8 71 131 B K H X S+ 0 0 116 -4,-1.8 4,-2.5 2,-0.2 -1,-0.2 0.898 113.3 41.0 -66.1 -42.9 7.6 8.9 -5.2 72 132 B I H < S+ 0 0 28 -4,-1.8 -2,-0.2 2,-0.2 -1,-0.2 0.901 114.4 53.5 -69.4 -41.3 11.0 7.6 -4.1 73 133 B Q H < S+ 0 0 122 -4,-3.1 -2,-0.2 1,-0.2 -1,-0.2 0.897 117.6 36.5 -59.2 -42.4 12.0 7.0 -7.8 74 134 B K H < 0 0 164 -4,-2.7 -2,-0.2 -5,-0.2 -1,-0.2 0.878 360.0 360.0 -79.4 -38.5 11.1 10.5 -8.8 75 135 B G < 0 0 103 -4,-2.5 -1,-0.2 -5,-0.3 -2,-0.1 -0.459 360.0 360.0 73.1 360.0 12.3 12.2 -5.6