==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOME 04-OCT-04 1XN9 . COMPND 2 MOLECULE: 30S RIBOSOMAL PROTEIN S24E; . SOURCE 2 ORGANISM_SCIENTIFIC: METHANOSARCINA MAZEI; . AUTHOR G.LIU,R.XIAO,D.PARISH,L.MA,D.SUKUMARAN,T.ACTON, . 101 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8355.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 56 55.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 27 26.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 17 16.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 61 0, 0.0 2,-0.4 0, 0.0 24,-0.2 0.000 360.0 360.0 360.0-177.4 -11.2 -10.6 8.8 2 2 A D E -A 24 0A 119 22,-3.7 22,-3.2 2,-0.0 2,-0.4 -0.927 360.0-167.1-116.9 139.5 -8.5 -9.8 11.4 3 3 A I E -A 23 0A 29 -2,-0.4 2,-0.4 20,-0.2 20,-0.2 -0.961 5.0-164.0-127.1 143.8 -6.5 -6.6 11.6 4 4 A K E -A 22 0A 94 18,-1.3 18,-1.5 -2,-0.4 2,-0.9 -0.968 20.8-133.5-131.9 115.5 -3.4 -5.8 13.6 5 5 A I E -A 21 0A 98 -2,-0.4 16,-0.3 16,-0.2 3,-0.1 -0.555 25.3-178.9 -69.8 105.2 -2.3 -2.3 14.1 6 6 A I E - 0 0 85 14,-2.3 2,-0.3 -2,-0.9 15,-0.2 0.998 60.3 -27.2 -67.5 -69.1 1.5 -2.5 13.4 7 7 A K E -A 20 0A 165 13,-1.1 13,-2.7 2,-0.0 2,-0.5 -0.962 50.5-138.8-147.5 160.7 2.4 1.1 14.0 8 8 A D E -A 19 0A 75 -2,-0.3 2,-0.3 11,-0.2 11,-0.2 -0.940 19.5-167.7-129.2 108.3 0.9 4.6 13.9 9 9 A K E -A 18 0A 113 9,-3.1 9,-0.6 -2,-0.5 2,-0.3 -0.691 10.3-143.4 -95.3 148.1 2.9 7.4 12.5 10 10 A K E -A 17 0A 124 -2,-0.3 7,-0.2 7,-0.2 3,-0.1 -0.858 16.5-179.7-112.5 146.9 1.9 11.1 12.9 11 11 A N E >> +A 16 0A 19 5,-1.4 5,-1.6 -2,-0.3 4,-1.4 -0.728 11.2 170.6-149.2 92.4 2.4 13.8 10.3 12 12 A P T 45S+ 0 0 82 0, 0.0 -1,-0.1 0, 0.0 5,-0.1 0.653 78.4 67.7 -75.1 -16.5 1.2 17.3 11.3 13 13 A L T 45S+ 0 0 134 1,-0.2 -2,-0.1 -3,-0.1 -3,-0.0 0.992 115.9 21.3 -64.9 -64.1 2.9 18.6 8.1 14 14 A L T 45S- 0 0 43 2,-0.1 -1,-0.2 66,-0.0 66,-0.1 0.708 107.6-124.8 -76.7 -21.5 0.7 17.0 5.6 15 15 A N T <5S+ 0 0 39 -4,-1.4 57,-1.2 1,-0.3 58,-0.4 0.804 73.2 110.4 79.7 32.2 -2.0 16.7 8.3 16 16 A R E < -A 11 0A 60 -5,-1.6 -5,-1.4 55,-0.2 2,-0.3 -0.532 61.3-127.7-123.0-170.5 -2.3 13.0 7.8 17 17 A R E -A 10 0A 87 -7,-0.2 53,-2.8 -2,-0.2 2,-1.0 -0.927 6.9-147.4-150.4 120.5 -1.4 9.7 9.6 18 18 A E E +AB 9 69A 33 -9,-0.6 -9,-3.1 -2,-0.3 2,-0.4 -0.779 25.7 178.1 -91.8 101.9 0.6 6.8 8.3 19 19 A L E -AB 8 68A 5 49,-2.0 49,-2.2 -2,-1.0 2,-0.4 -0.891 9.7-162.1-108.1 134.2 -0.9 3.7 10.0 20 20 A D E +A 7 0A 22 -13,-2.7 -14,-2.3 -2,-0.4 -13,-1.1 -0.915 19.5 151.2-117.1 142.5 0.5 0.2 9.2 21 21 A F E -A 5 0A 2 -2,-0.4 45,-0.9 45,-0.3 2,-0.4 -0.963 37.0-116.4-159.0 169.9 -1.3 -3.1 9.9 22 22 A I E -AC 4 65A 21 -18,-1.5 -18,-1.3 -2,-0.3 2,-0.5 -0.965 19.6-147.7-120.5 133.5 -1.7 -6.7 8.7 23 23 A V E -AC 3 64A 1 41,-3.0 41,-3.1 -2,-0.4 2,-0.3 -0.874 18.7-177.7-103.0 128.0 -4.9 -8.2 7.4 24 24 A K E +AC 2 63A 90 -22,-3.2 -22,-3.7 -2,-0.5 2,-0.3 -0.934 9.6 152.2-125.6 148.3 -5.5 -11.8 8.1 25 25 A Y - 0 0 26 37,-0.9 2,-0.2 -2,-0.3 4,-0.1 -0.958 41.9-123.7-161.7 173.4 -8.4 -14.1 7.1 26 26 A E S S- 0 0 198 -2,-0.3 2,-0.3 2,-0.2 3,-0.1 -0.609 83.7 -8.9-130.0 71.1 -9.5 -17.6 6.3 27 27 A G S S+ 0 0 38 -2,-0.2 -2,-0.1 3,-0.0 35,-0.0 -0.993 110.5 31.0 145.3-148.9 -10.9 -17.6 2.8 28 28 A S S S- 0 0 122 -2,-0.3 -2,-0.2 1,-0.1 0, 0.0 -0.112 87.6-102.8 -44.6 134.6 -11.9 -15.0 0.2 29 29 A T - 0 0 71 1,-0.1 -1,-0.1 -4,-0.1 2,-0.0 -0.298 38.5-109.4 -63.5 146.6 -9.7 -11.9 0.5 30 30 A P - 0 0 21 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.303 30.0-111.4 -75.1 161.3 -11.2 -8.9 2.3 31 31 A S >> - 0 0 69 1,-0.1 4,-2.7 -2,-0.0 3,-0.8 -0.751 18.3-122.4 -97.1 141.9 -12.2 -5.7 0.4 32 32 A R H 3> S+ 0 0 127 -2,-0.3 4,-2.7 1,-0.3 -1,-0.1 0.821 118.4 53.0 -47.2 -35.1 -10.3 -2.4 1.0 33 33 A N H 3> S+ 0 0 100 2,-0.2 4,-3.0 1,-0.2 -1,-0.3 0.885 107.8 49.6 -68.6 -40.1 -13.6 -1.0 2.0 34 34 A D H <> S+ 0 0 89 -3,-0.8 4,-1.8 2,-0.2 -2,-0.2 0.911 114.7 44.1 -64.3 -44.1 -14.1 -3.8 4.5 35 35 A V H X S+ 0 0 0 -4,-2.7 4,-3.4 2,-0.2 -2,-0.2 0.893 113.4 52.2 -67.0 -41.2 -10.7 -3.2 5.9 36 36 A R H X S+ 0 0 67 -4,-2.7 4,-4.0 -5,-0.3 5,-0.3 0.949 110.5 46.0 -59.2 -52.7 -11.2 0.6 5.8 37 37 A N H X S+ 0 0 95 -4,-3.0 4,-1.7 1,-0.2 -1,-0.2 0.856 113.9 51.8 -58.5 -36.3 -14.5 0.3 7.7 38 38 A K H X S+ 0 0 90 -4,-1.8 4,-2.5 -5,-0.2 -2,-0.2 0.959 114.7 39.9 -64.6 -53.0 -12.7 -2.0 10.1 39 39 A L H X S+ 0 0 3 -4,-3.4 4,-4.0 2,-0.2 5,-0.4 0.958 113.2 54.2 -60.3 -53.5 -9.9 0.4 10.7 40 40 A A H <>S+ 0 0 9 -4,-4.0 5,-1.6 1,-0.3 -1,-0.2 0.844 113.4 45.0 -48.7 -37.1 -12.2 3.4 10.8 41 41 A A H <5S+ 0 0 65 -4,-1.7 -1,-0.3 -5,-0.3 -2,-0.2 0.858 113.9 49.3 -75.2 -37.6 -14.0 1.4 13.5 42 42 A M H <5S+ 0 0 60 -4,-2.5 -2,-0.2 1,-0.2 -3,-0.2 0.926 122.4 32.0 -66.5 -47.3 -10.8 0.5 15.2 43 43 A L T <5S- 0 0 38 -4,-4.0 -1,-0.2 2,-0.1 -2,-0.2 0.322 104.4-132.0 -91.2 5.8 -9.5 4.0 15.2 44 44 A N T 5 + 0 0 142 -5,-0.4 -3,-0.2 1,-0.2 -4,-0.2 0.842 63.0 138.1 44.2 38.6 -13.0 5.3 15.5 45 45 A A < - 0 0 20 -5,-1.6 -1,-0.2 -6,-0.3 2,-0.1 -0.661 60.6 -88.2-109.8 166.7 -12.1 7.6 12.7 46 46 A P > - 0 0 54 0, 0.0 4,-1.1 0, 0.0 25,-0.2 -0.445 23.1-141.8 -75.0 146.8 -14.0 8.7 9.6 47 47 A L T 4 S+ 0 0 33 2,-0.2 3,-0.4 1,-0.2 -8,-0.0 0.939 100.9 59.5 -71.5 -49.6 -13.6 6.7 6.4 48 48 A E T 4 S+ 0 0 144 1,-0.3 -1,-0.2 3,-0.0 25,-0.1 0.846 112.3 41.5 -46.2 -39.4 -13.6 9.7 4.1 49 49 A L T 4 S+ 0 0 19 22,-0.1 22,-0.6 23,-0.1 2,-0.4 0.769 104.4 81.6 -79.4 -28.2 -10.5 10.8 6.1 50 50 A L E < +D 70 0A 0 -4,-1.1 2,-0.3 -3,-0.4 20,-0.2 -0.669 62.3 175.6 -82.7 129.5 -9.2 7.2 6.1 51 51 A V E -D 69 0A 35 18,-1.8 18,-3.5 -2,-0.4 2,-0.5 -0.923 24.4-135.4-133.1 157.4 -7.5 6.2 2.9 52 52 A I E -D 68 0A 8 -2,-0.3 16,-0.3 16,-0.3 3,-0.1 -0.968 4.7-163.1-118.7 125.2 -5.6 3.1 1.7 53 53 A Q E - 0 0 106 14,-3.9 2,-0.2 -2,-0.5 -1,-0.2 0.972 68.9 -47.2 -66.9 -56.9 -2.3 3.4 -0.2 54 54 A R E -D 67 0A 180 13,-0.5 13,-0.8 2,-0.0 2,-0.3 -0.728 48.5-130.8 177.5 130.6 -2.3 -0.1 -1.6 55 55 A I E -D 66 0A 38 -2,-0.2 2,-0.5 11,-0.2 11,-0.3 -0.692 17.6-157.6 -91.4 142.2 -3.0 -3.6 -0.3 56 56 A K E -D 65 0A 150 9,-4.2 9,-2.3 -2,-0.3 2,-0.4 -0.974 4.5-154.3-125.0 117.5 -0.5 -6.4 -1.0 57 57 A T E -D 64 0A 66 -2,-0.5 7,-0.2 7,-0.2 2,-0.1 -0.731 13.1-137.8 -92.6 137.6 -1.6 -10.0 -0.8 58 58 A E - 0 0 93 5,-2.1 2,-0.7 -2,-0.4 3,-0.3 -0.235 30.4 -88.0 -84.2 176.8 0.9 -12.8 -0.1 59 59 A Y S S- 0 0 213 1,-0.2 -1,-0.1 2,-0.1 0, 0.0 -0.807 95.1 -33.4 -93.5 116.0 1.2 -16.2 -1.8 60 60 A G S S+ 0 0 76 -2,-0.7 -1,-0.2 1,-0.1 -3,-0.0 0.858 109.2 114.7 40.4 47.2 -1.0 -18.8 -0.2 61 61 A M S S- 0 0 93 -3,-0.3 -1,-0.1 2,-0.2 -2,-0.1 0.274 75.1-133.6-123.6 4.5 -0.3 -17.1 3.1 62 62 A Q S S+ 0 0 86 -4,-0.2 -37,-0.9 1,-0.1 2,-0.3 0.887 70.9 107.2 38.1 57.5 -3.8 -16.0 3.9 63 63 A E E -C 24 0A 38 -39,-0.2 -5,-2.1 -5,-0.1 2,-0.4 -0.902 45.1-174.4-164.2 132.2 -2.6 -12.5 4.8 64 64 A S E -CD 23 57A 2 -41,-3.1 -41,-3.0 -2,-0.3 2,-0.3 -0.997 7.1-160.8-134.1 136.5 -2.7 -9.1 3.1 65 65 A K E +CD 22 56A 58 -9,-2.3 -9,-4.2 -2,-0.4 2,-0.3 -0.823 13.3 167.9-115.1 154.6 -1.1 -5.9 4.2 66 66 A G E - D 0 55A 0 -45,-0.9 2,-0.3 -2,-0.3 -45,-0.3 -0.851 30.5-125.8-168.5 128.8 -1.9 -2.3 3.2 67 67 A Y E - D 0 54A 92 -13,-0.8 -14,-3.9 -2,-0.3 -13,-0.5 -0.625 27.2-159.7 -80.9 132.3 -0.9 1.1 4.4 68 68 A A E -BD 19 52A 0 -49,-2.2 -49,-2.0 -2,-0.3 2,-0.5 -0.782 9.6-140.7-111.2 155.6 -3.7 3.5 5.3 69 69 A K E -BD 18 51A 35 -18,-3.5 -18,-1.8 -2,-0.3 2,-0.5 -0.957 13.4-163.8-121.0 112.9 -3.7 7.2 5.6 70 70 A L E - D 0 50A 14 -53,-2.8 2,-0.3 -2,-0.5 -20,-0.2 -0.851 10.3-169.4 -99.3 125.3 -5.7 8.8 8.4 71 71 A Y - 0 0 17 -22,-0.6 -55,-0.2 -2,-0.5 3,-0.1 -0.780 27.5-142.4-113.1 157.5 -6.4 12.5 8.1 72 72 A E S S+ 0 0 131 -57,-1.2 2,-0.3 -2,-0.3 -56,-0.1 0.705 89.4 10.3 -87.0 -23.8 -7.9 15.0 10.6 73 73 A D > - 0 0 98 -58,-0.4 4,-1.3 -24,-0.1 -1,-0.3 -0.986 59.9-136.2-153.7 153.7 -9.8 16.8 7.9 74 74 A A H > S+ 0 0 39 -2,-0.3 4,-2.5 2,-0.2 5,-0.2 0.846 102.4 68.8 -78.6 -37.0 -10.8 16.3 4.3 75 75 A D H > S+ 0 0 121 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.842 105.4 44.1 -49.0 -36.5 -10.0 19.9 3.4 76 76 A R H > S+ 0 0 76 2,-0.2 4,-4.2 1,-0.2 5,-0.3 0.923 106.8 57.4 -74.7 -47.5 -6.4 18.9 4.0 77 77 A M H X S+ 0 0 43 -4,-1.3 4,-2.1 1,-0.2 -2,-0.2 0.830 110.2 47.5 -51.7 -35.5 -6.6 15.6 2.2 78 78 A K H X S+ 0 0 141 -4,-2.5 4,-0.9 2,-0.2 -1,-0.2 0.977 115.2 41.6 -70.3 -58.5 -7.7 17.7 -0.8 79 79 A Q H < S+ 0 0 114 -4,-1.9 3,-0.3 1,-0.2 4,-0.2 0.877 115.5 53.1 -55.9 -40.6 -5.0 20.3 -0.6 80 80 A V H >< S+ 0 0 19 -4,-4.2 3,-1.3 1,-0.3 4,-0.4 0.933 113.1 41.7 -60.5 -48.2 -2.5 17.6 0.2 81 81 A E H 3< S+ 0 0 130 -4,-2.1 -1,-0.3 -5,-0.3 -2,-0.2 0.536 107.9 65.0 -76.0 -6.8 -3.5 15.7 -2.9 82 82 A Q T >< S+ 0 0 111 -4,-0.9 3,-0.8 -3,-0.3 -1,-0.3 0.436 84.6 74.2 -93.0 -2.6 -3.6 19.0 -4.7 83 83 A E G X S+ 0 0 113 -3,-1.3 3,-0.9 -4,-0.2 -1,-0.2 0.795 92.4 53.0 -78.4 -30.9 0.1 19.4 -4.2 84 84 A Y G 3 S+ 0 0 200 -4,-0.4 -1,-0.2 1,-0.2 3,-0.1 0.033 95.0 73.2 -92.3 25.5 0.9 16.8 -6.8 85 85 A V G < S+ 0 0 105 -3,-0.8 2,-0.4 1,-0.2 -1,-0.2 0.333 86.0 65.4-115.9 -0.2 -1.3 18.7 -9.3 86 86 A L < + 0 0 125 -3,-0.9 2,-0.3 2,-0.0 -1,-0.2 -0.729 68.0 136.1-126.5 80.4 1.2 21.5 -9.8 87 87 A K - 0 0 152 -2,-0.4 2,-0.2 -3,-0.1 -3,-0.0 -0.951 33.2-155.4-128.1 147.3 4.3 20.1 -11.5 88 88 A R - 0 0 200 -2,-0.3 3,-0.1 1,-0.0 -2,-0.0 -0.664 16.8-178.1-115.5 171.6 6.4 21.4 -14.3 89 89 A N + 0 0 136 -2,-0.2 2,-0.3 1,-0.1 -1,-0.0 -0.050 62.6 63.0-162.5 40.0 8.7 19.9 -16.9 90 90 A A S S- 0 0 75 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.971 90.4 -76.3-164.7 155.5 10.0 22.7 -18.9 91 91 A V - 0 0 135 -2,-0.3 -2,-0.1 1,-0.1 0, 0.0 -0.254 51.2-126.7 -57.3 142.3 12.2 25.8 -18.6 92 92 A P - 0 0 94 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.164 32.5 -80.7 -75.0-162.6 10.3 28.8 -16.9 93 93 A G - 0 0 75 1,-0.2 2,-0.1 0, 0.0 0, 0.0 0.643 50.5-111.7 -72.9-127.5 10.0 32.3 -18.3 94 94 A S - 0 0 123 2,-0.1 2,-0.3 0, 0.0 -1,-0.2 -0.366 23.9-102.0-143.4-137.6 12.7 34.9 -17.9 95 95 A E + 0 0 183 -2,-0.1 2,-0.2 2,-0.0 0, 0.0 -0.893 39.7 140.5-169.0 137.0 13.4 38.1 -16.1 96 96 A T + 0 0 129 -2,-0.3 2,-0.3 0, 0.0 -2,-0.1 -0.762 9.4 164.2 179.2 132.4 13.4 41.8 -16.8 97 97 A E + 0 0 202 -2,-0.2 2,-0.2 2,-0.0 -2,-0.0 -0.980 19.8 106.7-157.3 144.6 12.3 45.0 -15.1 98 98 A G - 0 0 76 -2,-0.3 2,-0.2 2,-0.0 0, 0.0 -0.679 25.2-171.9 154.6 152.4 12.9 48.7 -15.5 99 99 A E - 0 0 186 -2,-0.2 2,-0.3 2,-0.0 -2,-0.0 -0.470 9.5-146.4-138.7-150.7 11.2 51.9 -16.6 100 100 A E 0 0 180 -2,-0.2 -2,-0.0 1,-0.0 0, 0.0 -0.887 360.0 360.0 175.9 155.3 12.1 55.6 -17.3 101 101 A A 0 0 142 -2,-0.3 -2,-0.0 0, 0.0 -1,-0.0 -0.379 360.0 360.0 169.7 360.0 10.7 59.1 -17.1