==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER COMPLEX (ONCOGENE PROTEIN/PEPTIDE) 30-SEP-96 1YCR . COMPND 2 MOLECULE: MDM2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR P.H.KUSSIE,N.P.PAVLETICH . 98 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5480.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 70 71.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 12.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 8.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 11.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 33 33.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 1 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 25 A E 0 0 139 0, 0.0 2,-1.0 0, 0.0 98,-0.1 0.000 360.0 360.0 360.0-126.0 11.1 -13.4 -4.4 2 26 A T - 0 0 42 83,-0.0 24,-0.9 2,-0.0 2,-0.6 -0.829 360.0-159.5 -91.9 102.1 13.7 -12.9 -1.6 3 27 A L E +A 25 0A 84 -2,-1.0 2,-0.3 22,-0.2 22,-0.2 -0.804 16.6 177.1 -86.8 117.8 14.9 -9.3 -2.3 4 28 A V E -A 24 0A 2 20,-3.8 20,-3.1 -2,-0.6 81,-0.2 -0.802 26.3-141.1-118.1 159.9 18.2 -8.8 -0.6 5 29 A R E -B 84 0B 96 79,-2.3 79,-1.3 -2,-0.3 18,-0.2 -0.993 27.4-129.7-121.4 116.1 20.6 -5.8 -0.6 6 30 A P E -B 83 0B 8 0, 0.0 77,-0.2 0, 0.0 5,-0.0 -0.457 20.4-116.5 -71.9 139.7 24.3 -6.8 -0.7 7 31 A K > - 0 0 92 75,-3.1 4,-2.7 -2,-0.2 5,-0.3 -0.292 40.0 -89.5 -67.9 159.3 26.8 -5.4 1.8 8 32 A P H > S+ 0 0 107 0, 0.0 4,-1.9 0, 0.0 5,-0.2 0.791 124.7 43.4 -36.1 -58.8 29.8 -3.2 0.6 9 33 A L H > S+ 0 0 62 1,-0.2 4,-2.0 2,-0.2 5,-0.1 0.951 118.6 45.6 -59.7 -46.3 32.4 -5.9 -0.1 10 34 A L H > S+ 0 0 1 -3,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.823 109.5 54.2 -66.9 -34.0 29.8 -8.2 -1.8 11 35 A L H X S+ 0 0 37 -4,-2.7 4,-2.9 2,-0.2 -1,-0.2 0.892 108.8 49.5 -67.8 -37.5 28.4 -5.3 -3.8 12 36 A K H X S+ 0 0 124 -4,-1.9 4,-2.4 -5,-0.3 -2,-0.2 0.901 109.9 50.5 -64.5 -46.3 31.9 -4.6 -5.1 13 37 A L H < S+ 0 0 0 -4,-2.0 4,-0.5 2,-0.2 -2,-0.2 0.897 112.8 49.2 -57.2 -43.4 32.4 -8.3 -6.0 14 38 A L H ><>S+ 0 0 0 -4,-2.1 3,-2.0 2,-0.2 5,-1.4 0.946 108.2 49.3 -64.0 -52.5 29.0 -8.1 -7.8 15 39 A K H ><5S+ 0 0 88 -4,-2.9 3,-3.5 1,-0.3 -2,-0.2 0.927 99.3 70.4 -54.4 -41.6 29.8 -5.0 -9.8 16 40 A S T 3<5S+ 0 0 75 -4,-2.4 -1,-0.3 1,-0.3 -2,-0.2 0.755 103.2 42.7 -47.6 -29.1 33.0 -6.7 -10.8 17 41 A V T < 5S- 0 0 40 -3,-2.0 -1,-0.3 -4,-0.5 -2,-0.2 0.171 129.4 -89.4-107.8 21.1 31.0 -9.1 -12.9 18 42 A G T < 5S+ 0 0 50 -3,-3.5 2,-1.6 1,-0.2 -3,-0.2 0.214 80.3 137.1 97.5 -16.1 28.6 -6.6 -14.5 19 43 A A < - 0 0 1 -5,-1.4 2,-1.2 1,-0.1 -1,-0.2 -0.493 31.4-174.5 -69.3 90.7 25.8 -6.6 -11.9 20 44 A Q + 0 0 174 -2,-1.6 2,-0.3 -3,-0.1 -1,-0.1 -0.281 42.8 82.3 -84.6 53.7 25.1 -2.8 -11.8 21 45 A K - 0 0 80 -2,-1.2 -6,-0.1 -10,-0.1 -7,-0.1 -0.957 65.1-134.0-154.1 172.2 22.6 -2.5 -8.9 22 46 A D S S+ 0 0 84 -2,-0.3 2,-0.4 1,-0.1 -1,-0.1 0.580 86.9 52.4-102.0 -16.0 21.7 -2.3 -5.3 23 47 A T + 0 0 46 -18,-0.2 2,-0.3 -20,-0.0 -18,-0.2 -0.990 62.8 167.6-128.7 134.9 18.8 -4.8 -4.8 24 48 A Y E -A 4 0A 0 -20,-3.1 -20,-3.8 -2,-0.4 2,-0.2 -0.960 34.8-118.5-142.4 159.6 18.8 -8.4 -5.9 25 49 A T E > -A 3 0A 26 -2,-0.3 4,-1.6 -22,-0.2 3,-0.3 -0.528 44.6-105.2 -87.6 163.4 16.8 -11.6 -5.6 26 50 A M H > S+ 0 0 0 -24,-0.9 4,-2.2 1,-0.2 73,-0.2 0.892 120.5 58.9 -56.8 -36.6 18.8 -14.5 -4.0 27 51 A K H > S+ 0 0 83 71,-0.4 4,-2.1 1,-0.2 -1,-0.2 0.865 102.5 49.5 -60.4 -42.4 19.1 -16.1 -7.5 28 52 A E H > S+ 0 0 54 -3,-0.3 4,-2.5 2,-0.2 5,-0.3 0.908 109.7 53.3 -63.9 -43.0 20.9 -13.1 -9.1 29 53 A V H X S+ 0 0 0 -4,-1.6 4,-3.1 1,-0.2 5,-0.3 0.988 112.4 42.7 -55.1 -58.5 23.4 -13.0 -6.3 30 54 A L H X S+ 0 0 13 -4,-2.2 4,-1.8 1,-0.2 -1,-0.2 0.831 112.5 55.3 -57.2 -38.3 24.2 -16.7 -6.7 31 55 A F H X S+ 0 0 113 -4,-2.1 4,-1.4 2,-0.2 -1,-0.2 0.949 115.7 35.0 -60.6 -55.4 24.3 -16.3 -10.5 32 56 A Y H X S+ 0 0 54 -4,-2.5 4,-2.2 2,-0.2 -2,-0.2 0.882 115.6 56.0 -66.9 -42.5 26.9 -13.5 -10.6 33 57 A L H X S+ 0 0 0 -4,-3.1 4,-1.5 -5,-0.3 -1,-0.2 0.852 110.9 46.4 -59.2 -32.9 28.8 -14.9 -7.5 34 58 A G H X S+ 0 0 0 -4,-1.8 4,-2.6 -5,-0.3 -1,-0.2 0.825 109.1 54.7 -78.0 -32.6 29.1 -18.1 -9.5 35 59 A Q H X S+ 0 0 66 -4,-1.4 4,-2.3 2,-0.2 -2,-0.2 0.812 105.9 52.7 -67.4 -35.3 30.2 -16.2 -12.6 36 60 A Y H X S+ 0 0 8 -4,-2.2 4,-2.5 2,-0.2 6,-0.2 0.957 112.3 44.6 -65.3 -49.9 32.9 -14.5 -10.6 37 61 A I H <>S+ 0 0 0 -4,-1.5 5,-1.8 2,-0.2 6,-0.4 0.947 116.5 44.5 -60.5 -53.3 34.3 -17.9 -9.4 38 62 A M H ><5S+ 0 0 45 -4,-2.6 3,-1.7 1,-0.2 -1,-0.2 0.965 114.9 49.8 -57.6 -50.7 34.0 -19.6 -12.8 39 63 A T H 3<5S+ 0 0 99 -4,-2.3 -2,-0.2 1,-0.3 -1,-0.2 0.851 113.8 42.4 -56.4 -43.9 35.5 -16.6 -14.6 40 64 A K T 3<5S- 0 0 95 -4,-2.5 -1,-0.3 -5,-0.1 -2,-0.2 -0.009 107.3-127.0 -93.0 26.9 38.6 -16.2 -12.3 41 65 A R T < 5 + 0 0 153 -3,-1.7 -3,-0.2 1,-0.2 -2,-0.1 0.696 53.3 156.2 28.1 45.2 39.0 -20.0 -12.3 42 66 A L < + 0 0 15 -5,-1.8 10,-2.8 -6,-0.2 2,-0.2 0.445 41.3 91.7 -74.6 0.7 39.0 -20.0 -8.5 43 67 A Y B S-C 51 0C 43 -6,-0.4 2,-0.3 8,-0.2 8,-0.3 -0.578 87.9 -97.8 -95.1 159.6 37.9 -23.7 -8.3 44 68 A D - 0 0 28 6,-2.7 6,-0.2 3,-0.5 45,-0.1 -0.569 27.4-137.7 -73.6 140.5 40.1 -26.7 -8.2 45 69 A E S S+ 0 0 89 -2,-0.3 3,-0.3 1,-0.1 -1,-0.1 0.827 98.3 31.6 -68.9 -35.3 40.6 -28.3 -11.6 46 70 A K S S+ 0 0 155 1,-0.2 2,-0.9 42,-0.0 -1,-0.1 0.906 128.6 34.6 -88.7 -50.8 40.3 -31.9 -10.4 47 71 A Q S > S- 0 0 102 1,-0.1 3,-2.7 3,-0.1 -3,-0.5 -0.708 75.3-172.5-105.8 79.1 37.9 -31.6 -7.5 48 72 A Q T 3 S+ 0 0 33 -2,-0.9 -1,-0.1 39,-0.5 21,-0.1 0.531 75.0 71.9 -52.3 -10.6 35.7 -28.8 -8.9 49 73 A H T 3 S+ 0 0 24 38,-0.1 20,-2.6 -6,-0.1 2,-0.5 0.555 80.7 88.5 -82.4 -9.4 33.8 -28.5 -5.7 50 74 A I E < - D 0 68C 46 -3,-2.7 -6,-2.7 18,-0.2 2,-0.4 -0.796 59.2-171.3 -91.9 125.6 36.9 -26.9 -4.0 51 75 A V E -CD 43 67C 0 16,-2.6 16,-2.3 -2,-0.5 2,-0.5 -0.969 8.9-152.5-121.4 135.2 37.1 -23.1 -4.3 52 76 A Y E + D 0 66C 103 -10,-2.8 14,-0.2 -2,-0.4 6,-0.1 -0.939 26.9 155.9-108.4 127.3 40.3 -21.2 -3.2 53 77 A C > + 0 0 0 12,-3.0 3,-1.9 -2,-0.5 6,-0.9 0.296 35.8 110.9-140.5 18.2 39.9 -17.7 -2.1 54 78 A S T 3 S+ 0 0 87 11,-1.0 12,-0.1 1,-0.3 -1,-0.1 0.873 90.6 41.7 -58.3 -43.8 42.9 -16.9 0.2 55 79 A N T 3 S+ 0 0 120 10,-0.2 2,-0.3 4,-0.0 -1,-0.3 0.213 112.0 87.4 -88.4 14.6 44.4 -14.6 -2.4 56 80 A D S X> S- 0 0 11 -3,-1.9 3,-1.4 9,-0.1 4,-1.1 -0.901 80.4-128.2-130.0 153.3 40.9 -13.2 -3.1 57 81 A L H 3> S+ 0 0 42 -2,-0.3 4,-2.9 1,-0.3 5,-0.1 0.760 112.3 65.7 -56.7 -30.8 38.3 -10.6 -2.1 58 82 A L H 3> S+ 0 0 0 1,-0.2 4,-3.4 2,-0.2 -1,-0.3 0.884 100.8 49.2 -60.4 -38.0 35.9 -13.5 -1.9 59 83 A G H <>>S+ 0 0 9 -3,-1.4 4,-1.5 -6,-0.9 5,-0.7 0.830 108.8 50.6 -71.1 -34.5 38.1 -14.7 1.0 60 84 A D H <5S+ 0 0 114 -4,-1.1 -2,-0.2 -7,-0.2 -1,-0.2 0.945 116.2 45.7 -63.4 -46.8 37.9 -11.3 2.6 61 85 A L H <5S+ 0 0 7 -4,-2.9 -2,-0.2 1,-0.2 -3,-0.2 0.966 121.9 31.8 -57.3 -66.7 34.2 -11.6 2.1 62 86 A F H <5S- 0 0 1 -4,-3.4 -1,-0.2 2,-0.2 -3,-0.2 0.656 100.7-133.8 -70.9 -17.3 33.6 -15.2 3.3 63 87 A G T <5 + 0 0 57 -4,-1.5 -3,-0.2 -5,-0.3 -4,-0.1 0.846 67.6 103.7 66.5 35.7 36.4 -14.9 5.8 64 88 A V S -D 50 0C 18 -2,-0.3 3,-2.6 -18,-0.2 7,-0.3 -0.948 12.0-151.5-107.7 118.8 33.5 -26.7 -0.6 69 93 A V T 3 S+ 0 0 0 -20,-2.6 -1,-0.1 -2,-0.6 -19,-0.1 0.712 94.5 73.3 -61.0 -15.0 30.4 -25.8 -2.7 70 94 A K T 3 S+ 0 0 111 -21,-0.4 2,-1.1 1,-0.2 -1,-0.3 0.527 76.2 80.3 -76.0 -6.8 29.1 -29.1 -1.5 71 95 A E <> + 0 0 86 -3,-2.6 4,-2.5 1,-0.2 3,-0.3 -0.695 60.1 176.6-102.1 83.4 28.5 -27.8 2.0 72 96 A H H > S+ 0 0 72 -2,-1.1 4,-2.7 1,-0.2 5,-0.3 0.859 74.9 52.1 -54.7 -46.3 25.2 -26.0 1.3 73 97 A R H > S+ 0 0 215 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.904 113.4 46.0 -61.8 -37.2 24.5 -24.8 4.9 74 98 A K H > S+ 0 0 87 -3,-0.3 4,-2.7 2,-0.2 -2,-0.2 0.976 115.0 43.9 -68.9 -54.6 28.0 -23.3 5.1 75 99 A I H X S+ 0 0 0 -4,-2.5 4,-2.8 -7,-0.3 5,-0.2 0.935 115.1 49.9 -54.0 -51.0 27.9 -21.5 1.7 76 100 A Y H X S+ 0 0 57 -4,-2.7 4,-2.0 1,-0.2 -1,-0.2 0.863 112.2 48.7 -58.3 -38.2 24.4 -20.3 2.3 77 101 A T H X S+ 0 0 74 -4,-1.8 4,-1.9 -5,-0.3 -1,-0.2 0.925 111.0 47.4 -69.0 -46.4 25.4 -19.0 5.7 78 102 A M H X S+ 0 0 6 -4,-2.7 4,-0.5 1,-0.2 3,-0.3 0.949 113.1 49.8 -60.8 -45.7 28.5 -17.2 4.6 79 103 A I H >< S+ 0 0 2 -4,-2.8 3,-1.2 1,-0.2 -1,-0.2 0.891 109.1 52.9 -59.6 -41.8 26.6 -15.6 1.8 80 104 A Y H >< S+ 0 0 73 -4,-2.0 3,-2.0 1,-0.3 -1,-0.2 0.833 96.3 65.4 -65.2 -32.0 23.8 -14.5 4.2 81 105 A R H 3< S+ 0 0 124 -4,-1.9 -1,-0.3 -3,-0.3 -2,-0.2 0.711 102.7 52.1 -61.6 -19.2 26.2 -12.8 6.5 82 106 A N T << S+ 0 0 17 -3,-1.2 -75,-3.1 -4,-0.5 -1,-0.3 0.247 102.8 70.8-102.8 11.5 26.9 -10.4 3.7 83 107 A L E < -B 6 0B 10 -3,-2.0 2,-0.3 -77,-0.2 -79,-0.0 -0.808 60.2-151.6-123.3 169.3 23.3 -9.5 2.9 84 108 A V E B 5 0B 70 -79,-1.3 -79,-2.3 -2,-0.3 -3,-0.0 -0.978 360.0 360.0-141.7 143.2 20.5 -7.5 4.5 85 109 A V 0 0 127 -2,-0.3 -80,-0.1 -81,-0.2 -83,-0.0 0.253 360.0 360.0 89.4 360.0 16.7 -8.1 4.2 86 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 87 17 B E 0 0 99 0, 0.0 -39,-0.5 0, 0.0 2,-0.2 0.000 360.0 360.0 360.0 115.5 31.2 -33.2 -11.3 88 18 B T > - 0 0 64 1,-0.1 4,-2.4 -41,-0.1 3,-0.3 -0.558 360.0-109.6 -92.9 163.8 31.9 -29.7 -12.7 89 19 B F H > S+ 0 0 1 1,-0.2 4,-3.3 2,-0.2 5,-0.3 0.938 117.2 52.0 -53.2 -54.3 31.8 -26.5 -10.7 90 20 B S H > S+ 0 0 28 1,-0.2 4,-1.1 2,-0.2 -1,-0.2 0.812 110.1 48.5 -54.3 -37.2 28.7 -25.2 -12.6 91 21 B D H 4 S+ 0 0 92 -3,-0.3 4,-0.4 2,-0.2 -1,-0.2 0.938 115.9 44.3 -67.8 -47.4 26.8 -28.5 -11.9 92 22 B L H >< S+ 0 0 18 -4,-2.4 3,-1.1 1,-0.2 -2,-0.2 0.901 111.7 52.2 -63.5 -44.0 27.8 -28.3 -8.2 93 23 B W H >< S+ 0 0 11 -4,-3.3 3,-1.0 1,-0.3 -1,-0.2 0.737 99.3 62.5 -68.5 -26.9 27.0 -24.6 -7.8 94 24 B K T 3< S+ 0 0 142 -4,-1.1 -1,-0.3 -5,-0.3 -2,-0.2 0.668 89.5 71.6 -76.5 -9.8 23.5 -24.7 -9.2 95 25 B L T < S+ 0 0 116 -3,-1.1 -1,-0.2 -4,-0.4 -2,-0.1 0.146 75.1 111.7 -89.1 18.6 22.5 -27.0 -6.4 96 26 B L S < S- 0 0 9 -3,-1.0 2,-0.1 1,-0.1 -26,-0.0 -0.741 86.4 -85.7 -94.1 148.2 22.6 -24.2 -3.9 97 27 B P - 0 0 54 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 -0.270 38.4-157.0 -54.1 117.0 19.4 -22.8 -2.2 98 28 B E 0 0 107 -4,-0.1 -71,-0.4 -2,-0.1 -70,-0.1 0.340 360.0 360.0 -83.6 4.9 18.1 -20.2 -4.6 99 29 B N 0 0 74 -73,-0.2 -74,-0.0 -74,-0.1 -96,-0.0 -0.911 360.0 360.0-150.3 360.0 16.1 -18.1 -2.1