==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 19-JAN-05 1YLB . COMPND 2 MOLECULE: PLASTOCYANIN, CHLOROPLAST; . SOURCE 2 ORGANISM_SCIENTIFIC: SPINACIA OLERACEA; . AUTHOR F.MUSIANI,A.DIKIY,A.Y.SEMENOV,S.CIURLI . 99 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5502.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 67 67.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 9 9.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 20 20.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 17 17.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 10.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 5 5.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 B V 0 0 99 0, 0.0 27,-2.2 0, 0.0 2,-0.8 0.000 360.0 360.0 360.0 133.2 91.9 75.6 -35.4 2 2 B E E -a 28 0A 113 25,-0.2 2,-0.5 27,-0.1 27,-0.2 -0.865 360.0-146.4-102.6 95.9 90.0 74.7 -32.3 3 3 B V E -a 29 0A 0 25,-1.8 27,-2.3 -2,-0.8 2,-0.9 -0.545 15.4-138.7 -70.2 114.5 91.8 76.4 -29.4 4 4 B L E -aB 30 15A 41 11,-2.8 2,-1.0 -2,-0.5 11,-0.7 -0.656 8.5-151.4 -85.4 100.5 91.5 74.1 -26.5 5 5 B L E S+aB 31 14A 0 25,-3.1 27,-1.6 -2,-0.9 28,-1.0 -0.610 79.4 35.7 -71.8 103.8 90.8 75.9 -23.2 6 6 B G S > S- 0 0 2 7,-2.9 3,-2.7 -2,-1.0 -1,-0.2 0.725 84.3-134.7 124.8 44.2 92.3 73.8 -20.3 7 7 B G T 3> S- 0 0 7 6,-2.5 4,-1.2 -3,-0.4 7,-0.1 0.098 77.7 -39.2 -26.5 90.4 95.6 72.2 -21.5 8 8 B G T 34 S- 0 0 61 1,-0.2 2,-2.0 2,-0.2 -1,-0.3 0.686 91.9 -91.9 60.7 16.1 95.3 68.6 -20.3 9 9 B D T <4 S+ 0 0 114 -3,-2.7 -1,-0.2 2,-0.3 -2,-0.1 -0.152 126.8 75.1 69.2 -39.9 93.7 69.8 -17.0 10 10 B G T 4 S+ 0 0 74 -2,-2.0 2,-0.3 1,-0.2 -2,-0.2 0.320 93.7 52.7 -85.2 4.6 97.2 69.9 -15.5 11 11 B S S < S- 0 0 73 -4,-1.2 2,-2.5 -5,-0.2 -2,-0.3 -0.857 77.3-147.6-136.0 108.4 98.1 73.1 -17.4 12 12 B L + 0 0 75 -2,-0.3 2,-0.3 -6,-0.2 -4,-0.1 -0.412 68.4 90.2 -70.5 74.6 95.6 76.0 -16.9 13 13 B A S S- 0 0 33 -2,-2.5 -7,-2.9 79,-0.1 -6,-2.5 -0.872 77.5 -88.2-154.6 173.0 96.2 77.2 -20.5 14 14 B F E -B 5 0A 7 79,-0.4 -9,-0.2 -2,-0.3 3,-0.2 -0.596 35.8-118.0 -82.8 164.9 95.2 77.0 -24.1 15 15 B L E S+B 4 0A 103 -11,-0.7 -11,-2.8 1,-0.3 2,-0.1 -0.917 107.4 29.4-133.9 118.7 96.5 74.5 -26.7 16 16 B P S S- 0 0 43 0, 0.0 -1,-0.3 0, 0.0 3,-0.1 0.604 73.7-178.5 -72.4 161.3 97.8 76.1 -28.9 17 17 B G S S+ 0 0 39 1,-0.3 78,-2.0 -3,-0.2 2,-0.3 0.561 79.6 28.8-100.2 -12.5 99.1 79.2 -26.9 18 18 B D B S+d 95 0B 89 76,-0.2 -1,-0.3 63,-0.0 2,-0.3 -0.959 77.2 140.9-142.7 126.1 100.5 80.8 -30.0 19 19 B F - 0 0 20 76,-2.6 2,-0.3 -2,-0.3 78,-0.1 -0.945 34.0-130.4-151.9 175.0 99.2 80.3 -33.6 20 20 B S - 0 0 77 -2,-0.3 2,-0.3 76,-0.2 78,-0.2 -0.912 19.4-177.9-131.3 157.8 98.6 82.2 -36.8 21 21 B V B -g 98 0C 23 76,-2.8 78,-2.8 -2,-0.3 2,-0.3 -0.901 25.5-111.7-142.0 169.8 95.6 82.5 -39.2 22 22 B A > - 0 0 47 -2,-0.3 3,-1.4 76,-0.2 52,-0.2 -0.710 48.2 -87.0 -99.2 162.3 94.5 84.1 -42.5 23 23 B S T 3 S+ 0 0 58 76,-0.3 52,-0.3 -2,-0.3 3,-0.1 -0.498 113.8 24.7 -70.9 132.7 91.9 86.9 -42.7 24 24 B G T 3 S+ 0 0 45 50,-3.1 -1,-0.2 1,-0.3 51,-0.2 0.414 94.0 122.9 92.8 -0.2 88.3 85.6 -42.9 25 25 B E < - 0 0 112 -3,-1.4 49,-2.5 49,-0.5 2,-0.5 -0.389 60.0-116.9 -83.0 170.3 89.1 82.3 -41.2 26 26 B E E - C 0 73A 94 47,-0.3 2,-0.5 -2,-0.1 47,-0.3 -0.937 14.1-155.2-118.5 127.2 87.3 81.1 -38.1 27 27 B I E - C 0 72A 2 45,-2.8 45,-2.3 -2,-0.5 2,-0.6 -0.847 10.3-156.4 -93.1 134.2 88.8 80.4 -34.6 28 28 B V E -aC 2 71A 32 -27,-2.2 -25,-1.8 -2,-0.5 2,-0.6 -0.948 3.2-161.5-110.3 113.4 86.8 77.9 -32.5 29 29 B F E +aC 3 70A 1 41,-2.6 41,-2.6 -2,-0.6 2,-0.3 -0.864 19.5 174.4 -94.3 120.5 87.4 78.3 -28.8 30 30 B K E -aC 4 69A 68 -27,-2.3 -25,-3.1 -2,-0.6 39,-0.2 -0.928 27.5-114.6-130.5 153.7 86.3 75.1 -26.9 31 31 B N E +a 5 0A 7 37,-1.7 -25,-0.2 -2,-0.3 3,-0.1 -0.334 31.1 163.3 -75.9 161.4 86.5 73.8 -23.3 32 32 B N - 0 0 67 -27,-1.6 2,-0.3 1,-0.5 -26,-0.2 0.454 60.8 -24.2-138.3 -43.3 88.5 70.9 -22.0 33 33 B A S S+ 0 0 10 -28,-1.0 -1,-0.5 1,-0.1 -24,-0.1 -0.939 103.1 51.1-157.4 172.5 89.0 71.0 -18.2 34 34 B G S S- 0 0 38 -2,-0.3 -1,-0.1 1,-0.1 -28,-0.0 0.785 91.0-119.9 67.6 29.6 89.0 73.3 -15.1 35 35 B F S S+ 0 0 73 29,-0.1 29,-0.1 -3,-0.1 -1,-0.1 -0.025 73.6 49.3 -59.9 161.0 85.6 75.0 -15.9 36 36 B P + 0 0 62 0, 0.0 2,-0.3 0, 0.0 28,-0.2 0.555 63.3 154.3 -88.2 171.0 84.3 77.6 -16.5 37 37 B H B +H 63 0D 0 26,-2.0 26,-2.9 -2,-0.1 2,-0.3 -0.874 14.7 177.2-144.0 177.6 86.1 79.6 -19.2 38 38 B N - 0 0 4 -2,-0.3 2,-0.4 24,-0.2 24,-0.1 -0.900 29.8-107.7-159.8-178.6 85.6 82.2 -21.9 39 39 B V + 0 0 0 -2,-0.3 18,-2.8 45,-0.1 2,-0.4 -0.998 29.8 176.5-129.5 133.2 87.6 84.2 -24.5 40 40 B V E -E 83 0B 31 43,-3.0 43,-3.0 -2,-0.4 2,-0.3 -0.991 23.3-139.7-132.4 120.0 88.5 87.9 -24.2 41 41 B F E -E 82 0B 3 -2,-0.4 2,-0.7 41,-0.3 41,-0.3 -0.653 34.2-110.3 -77.7 135.4 90.7 89.8 -26.7 42 42 B D >> - 0 0 27 39,-2.5 3,-2.6 -2,-0.3 4,-1.9 -0.555 21.5-150.0 -79.3 107.8 93.0 92.2 -24.8 43 43 B E T 34 S+ 0 0 171 -2,-0.7 -1,-0.2 1,-0.3 9,-0.1 0.549 93.2 51.1 -58.5 -10.7 91.8 95.8 -25.6 44 44 B D T 34 S+ 0 0 145 1,-0.0 -1,-0.3 0, 0.0 -2,-0.1 0.530 118.1 33.7-100.4 -10.8 95.3 97.3 -25.3 45 45 B E T <4 S+ 0 0 94 -3,-2.6 -2,-0.2 36,-0.2 34,-0.1 0.582 88.7 102.6-128.5 -13.2 97.1 94.9 -27.6 46 46 B I S < S- 0 0 26 -4,-1.9 34,-0.2 1,-0.1 33,-0.1 -0.164 85.8 -83.3 -56.1 163.5 94.6 94.0 -30.4 47 47 B P > - 0 0 25 0, 0.0 3,-0.7 0, 0.0 -1,-0.1 -0.230 36.9-115.0 -71.0 165.2 95.1 95.7 -33.8 48 48 B S T 3 S+ 0 0 128 1,-0.2 2,-0.1 -3,-0.1 -2,-0.1 0.837 103.2 71.2 -75.1 -28.6 93.7 99.2 -34.3 49 49 B G T 3 S+ 0 0 58 2,-0.0 2,-0.3 0, 0.0 -1,-0.2 0.179 99.4 46.0 -78.7 18.1 91.1 98.4 -37.0 50 50 B V S < S- 0 0 40 -3,-0.7 2,-0.4 -2,-0.1 3,-0.0 -0.924 71.7-126.2-145.8 169.2 88.7 96.5 -34.6 51 51 B D > - 0 0 99 -2,-0.3 3,-2.5 1,-0.1 4,-0.3 -0.998 18.5-138.2-118.4 128.6 87.0 96.6 -31.2 52 52 B A G >> S+ 0 0 6 -2,-0.4 4,-3.2 1,-0.3 3,-2.4 0.836 99.5 76.7 -53.7 -27.0 87.5 93.7 -28.8 53 53 B A G 34 S+ 0 0 76 1,-0.3 -1,-0.3 2,-0.2 -10,-0.0 0.612 93.7 50.6 -63.8 -8.2 83.8 94.0 -28.0 54 54 B K G <4 S+ 0 0 161 -3,-2.5 -1,-0.3 3,-0.0 -2,-0.2 0.488 122.3 29.2 -98.7 -7.4 83.0 92.3 -31.4 55 55 B I T <4 S+ 0 0 10 -3,-2.4 -2,-0.2 -4,-0.3 -3,-0.1 0.642 104.9 75.4-130.9 -25.2 85.4 89.3 -30.8 56 56 B S S < S- 0 0 19 -4,-3.2 -16,-0.3 -15,-0.1 2,-0.1 -0.429 86.6-106.3 -71.6 160.7 85.5 88.8 -27.0 57 57 B M - 0 0 20 -18,-2.8 -1,-0.1 1,-0.1 -2,-0.1 -0.357 47.4 -83.7 -73.5 168.1 82.5 87.1 -25.3 58 58 B S > - 0 0 83 1,-0.1 3,-2.0 -2,-0.1 -1,-0.1 -0.405 45.3-105.3 -70.7 155.3 80.2 89.2 -23.1 59 59 B E T 3 S+ 0 0 184 1,-0.3 -1,-0.1 -2,-0.1 -2,-0.1 0.772 119.0 35.0 -61.1 -28.0 81.4 89.8 -19.5 60 60 B E T 3 S+ 0 0 185 2,-0.0 2,-0.6 0, 0.0 -1,-0.3 0.172 94.8 100.4-111.5 15.5 78.9 87.4 -17.9 61 61 B D < + 0 0 84 -3,-2.0 2,-0.3 2,-0.0 -4,-0.1 -0.902 48.6 159.2-101.8 113.9 78.9 84.8 -20.8 62 62 B L - 0 0 53 -2,-0.6 2,-0.6 -24,-0.1 -24,-0.2 -0.981 45.5-115.9-137.8 150.2 81.1 81.8 -20.0 63 63 B L B +H 37 0D 8 -26,-2.9 -26,-2.0 -2,-0.3 7,-0.0 -0.752 39.0 168.4 -82.7 110.3 81.5 78.1 -21.1 64 64 B N + 0 0 111 -2,-0.6 -1,-0.1 -28,-0.2 -29,-0.1 0.650 50.7 58.3-112.9 -16.3 80.7 76.0 -18.0 65 65 B A S > S- 0 0 37 1,-0.1 3,-1.0 -30,-0.0 -34,-0.2 -0.711 90.5-102.5-106.6 166.0 80.3 72.4 -19.2 66 66 B P T 3 S+ 0 0 84 0, 0.0 -35,-0.3 0, 0.0 -1,-0.1 0.901 113.8 40.9 -48.7 -54.2 82.9 70.2 -21.0 67 67 B G T 3 S+ 0 0 69 -37,-0.1 -4,-0.0 2,-0.0 -35,-0.0 0.429 84.2 121.1 -88.6 2.6 81.5 70.4 -24.5 68 68 B E < - 0 0 73 -3,-1.0 -37,-1.7 -38,-0.1 2,-0.3 -0.266 40.3-170.4 -70.2 155.8 80.5 74.1 -24.8 69 69 B T E -C 30 0A 72 -39,-0.2 2,-0.3 2,-0.0 -39,-0.2 -0.910 22.4-157.0-140.5 164.0 82.1 76.4 -27.4 70 70 B Y E -C 29 0A 49 -41,-2.6 -41,-2.6 -2,-0.3 2,-0.3 -0.972 20.4-164.9-137.1 151.5 82.5 79.9 -28.7 71 71 B K E +C 28 0A 117 -2,-0.3 2,-0.3 -43,-0.2 -43,-0.2 -0.979 10.2 179.1-141.3 149.1 83.4 80.9 -32.3 72 72 B V E -C 27 0A 14 -45,-2.3 -45,-2.8 -2,-0.3 2,-0.5 -0.929 25.1-142.4-152.1 128.8 84.6 83.9 -34.3 73 73 B T E -C 26 0A 87 -2,-0.3 2,-0.3 -47,-0.3 -47,-0.3 -0.808 38.0-158.6 -76.8 128.0 85.5 84.7 -38.0 74 74 B L + 0 0 2 -49,-2.5 -50,-3.1 -2,-0.5 -49,-0.5 -0.800 18.8 167.1-118.2 154.7 88.5 87.0 -37.6 75 75 B T + 0 0 57 -2,-0.3 23,-0.1 -52,-0.3 -52,-0.0 -0.893 30.7 81.2-152.5 176.9 90.1 89.7 -39.9 76 76 B E S S- 0 0 98 -2,-0.3 2,-0.9 1,-0.1 22,-0.3 0.748 74.8-101.4 78.3 115.5 92.7 92.5 -40.0 77 77 B K S S+ 0 0 155 20,-0.1 2,-0.3 22,-0.1 22,-0.1 -0.511 78.6 87.4 -70.1 101.2 96.4 91.7 -40.3 78 78 B G S S- 0 0 19 -2,-0.9 20,-2.5 20,-0.3 2,-0.1 -0.970 79.9 -57.9-172.2 177.4 98.0 92.1 -36.8 79 79 B T E - F 0 97B 74 -2,-0.3 2,-0.3 18,-0.2 18,-0.3 -0.448 42.2-158.5 -67.8 143.8 98.8 90.4 -33.5 80 80 B Y E - F 0 96B 0 16,-2.8 16,-2.7 -34,-0.2 2,-0.7 -0.731 10.3-177.7-135.0 82.1 95.8 88.9 -31.5 81 81 B K E + F 0 95B 59 -2,-0.3 -39,-2.5 14,-0.3 2,-0.4 -0.714 12.8 169.8 -71.0 115.4 96.3 88.3 -27.8 82 82 B F E +EF 41 94B 1 12,-2.1 12,-2.5 -2,-0.7 -41,-0.3 -0.995 4.4 171.5-126.4 139.5 93.1 86.8 -26.4 83 83 B Y E -EF 40 93B 31 -43,-3.0 -43,-3.0 -2,-0.4 2,-0.6 -0.737 40.3-100.3-133.2 177.1 93.1 85.4 -22.9 84 84 B C >> - 0 0 0 8,-1.8 3,-2.3 -2,-0.2 4,-1.7 -0.931 31.2-142.3-110.7 109.0 90.5 84.0 -20.5 85 85 B S T 34 S+ 0 0 61 -2,-0.6 4,-0.4 1,-0.3 -1,-0.1 0.741 97.0 50.4 -56.2 -32.1 89.6 86.8 -18.0 86 86 B P T 34 S+ 0 0 72 0, 0.0 -1,-0.3 0, 0.0 4,-0.1 0.815 128.1 25.2 -63.4 -28.2 89.3 84.6 -14.9 87 87 B H T <>>S+ 0 0 37 -3,-2.3 5,-2.5 5,-0.2 4,-0.8 0.390 88.2 100.4-122.8 -4.3 92.7 83.1 -15.6 88 88 B Q T ><5S+ 0 0 75 -4,-1.7 3,-0.8 3,-0.2 -3,-0.1 0.915 92.2 44.5 -57.1 -37.8 94.7 85.6 -17.7 89 89 B G T 345S+ 0 0 72 -4,-0.4 -1,-0.2 1,-0.3 -2,-0.1 0.880 107.8 57.9 -75.3 -32.4 96.7 86.7 -14.6 90 90 B A T 345S- 0 0 78 -4,-0.1 -1,-0.3 2,-0.1 -2,-0.2 0.610 134.6 -92.6 -70.2 -9.2 97.1 83.0 -13.6 91 91 B G T <<5S+ 0 0 48 -3,-0.8 2,-1.9 -4,-0.8 -3,-0.2 0.212 80.8 139.2 121.9 -9.4 98.8 82.7 -17.1 92 92 B M < + 0 0 0 -5,-2.5 -8,-1.8 -8,-0.2 2,-0.3 -0.413 29.9 138.4 -72.1 86.4 96.0 81.6 -19.4 93 93 B V E - F 0 83B 57 -2,-1.9 -79,-0.4 -10,-0.2 2,-0.3 -0.956 32.0-165.6-128.7 142.2 96.9 83.8 -22.5 94 94 B G E - F 0 82B 1 -12,-2.5 -12,-2.1 -2,-0.3 2,-0.5 -0.963 9.9-149.1-126.2 151.8 96.8 82.9 -26.2 95 95 B K E +dF 18 81B 69 -78,-2.0 -76,-2.6 -2,-0.3 -14,-0.3 -0.860 18.8 172.8-123.9 93.3 98.4 84.7 -29.2 96 96 B V E - F 0 80B 0 -16,-2.7 -16,-2.8 -2,-0.5 2,-0.3 -0.502 12.2-167.8 -78.2 162.4 96.6 84.4 -32.5 97 97 B T E - F 0 79B 25 -18,-0.3 -76,-2.8 -2,-0.2 2,-0.7 -0.904 20.8-136.3-153.9 130.9 97.9 86.5 -35.3 98 98 B V B g 21 0C 2 -20,-2.5 -20,-0.3 -22,-0.3 -76,-0.2 -0.823 360.0 360.0 -89.7 111.7 96.4 87.3 -38.7 99 99 B N 0 0 147 -78,-2.8 -76,-0.3 -2,-0.7 -1,-0.1 0.223 360.0 360.0-142.3 360.0 99.3 87.0 -41.2